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Published in: Malaria Journal 1/2010

Open Access 01-12-2010 | Methodology

A nuclear targeting system in Plasmodium falciparum

Authors: Kanjana Wittayacom, Chairat Uthaipibull, Krittikorn Kumpornsin, Ruchanok Tinikul, Theerarat Kochakarn, Pucharee Songprakhon, Thanat Chookajorn

Published in: Malaria Journal | Issue 1/2010

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Abstract

Background

The distinct differences in gene control mechanisms acting in the nucleus between Plasmodium falciparum and the human host could lead to new potential drug targets for anti-malarial development. New molecular toolkits are required for dissecting molecular machineries in the P. falciparum nucleus. One valuable tool commonly used in model organisms is protein targeting to specific sub-cellular locations. Targeting proteins to specified locations allows labeling of organelles for microscopy, or testing of how the protein of interest modulates organelle function. In recent years, this approach has been developed for various malaria organelles, such as the mitochondrion and the apicoplast. A tool for targeting a protein of choice to the P. falciparum nucleus using an exogenous nuclear localization sequence is reported here.

Methods

To develop a nuclear targeting system, a putative nuclear localization sequence was fused with green fluorescent protein (GFP). The nuclear localization sequence from the yeast transcription factor Gal4 was chosen because of its well-defined nuclear localization signal. A series of truncated Gal4 constructs was also created to narrow down the nuclear localization sequence necessary for P. falciparum nuclear import. Transfected parasites were analysed by fluorescent and laser-scanning confocal microscopy.

Results

The nuclear localization sequence of Gal4 is functional in P. falciparum. It effectively transported GFP into the nucleus, and the first 74 amino acid residues were sufficient for nuclear localization.

Conclusions

The Gal4 fusion technique enables specific transport of a protein of choice into the P. falciparum nucleus, and thus provides a tool for labeling nuclei without using DNA-staining dyes. The finding also indicates similarities between the nuclear transport mechanisms of yeast and P. falciparum. Since the nuclear transport system has been thoroughly studied in yeast, this could give clues to research on the same mechanism in P. falciparum.
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Literature
1.
go back to reference Chookajorn T, Ponsuwanna P, Cui L: Mutually exclusive var gene expression in the malaria parasite: multiple layers of regulation. Trends Parasitol. 2008, 24: 455-461. 10.1016/j.pt.2008.07.005.CrossRefPubMed Chookajorn T, Ponsuwanna P, Cui L: Mutually exclusive var gene expression in the malaria parasite: multiple layers of regulation. Trends Parasitol. 2008, 24: 455-461. 10.1016/j.pt.2008.07.005.CrossRefPubMed
2.
go back to reference Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B: Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 2002, 419: 498-511. 10.1038/nature01097.CrossRefPubMed Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B: Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 2002, 419: 498-511. 10.1038/nature01097.CrossRefPubMed
3.
go back to reference Kelly JM, McRobert L, Baker DA: Evidence on the chromosomal location of centromeric DNA in Plasmodium falciparum from etoposide-mediated topoisomerase-II cleavage. Proc Natl Acad Sci USA. 2006, 103: 6706-6711. 10.1073/pnas.0510363103.PubMedCentralCrossRefPubMed Kelly JM, McRobert L, Baker DA: Evidence on the chromosomal location of centromeric DNA in Plasmodium falciparum from etoposide-mediated topoisomerase-II cleavage. Proc Natl Acad Sci USA. 2006, 103: 6706-6711. 10.1073/pnas.0510363103.PubMedCentralCrossRefPubMed
4.
go back to reference Li F, Sonbuchner L, Kyes SA, Epp C, Deitsch KW: Nuclear non-coding RNAs are transcribed from the centromeres of Plasmodium falciparum and are associated with centromeric chromatin. J Biol Chem. 2008, 283: 5692-5698. 10.1074/jbc.M707344200.CrossRefPubMed Li F, Sonbuchner L, Kyes SA, Epp C, Deitsch KW: Nuclear non-coding RNAs are transcribed from the centromeres of Plasmodium falciparum and are associated with centromeric chromatin. J Biol Chem. 2008, 283: 5692-5698. 10.1074/jbc.M707344200.CrossRefPubMed
5.
go back to reference Scherf A, Figueiredo LM, Freitas-Junior LH: Plasmodium telomeres: a pathogen's perspective. Curr Opin Microbiol. 2001, 4: 409-414. 10.1016/S1369-5274(00)00227-7.CrossRefPubMed Scherf A, Figueiredo LM, Freitas-Junior LH: Plasmodium telomeres: a pathogen's perspective. Curr Opin Microbiol. 2001, 4: 409-414. 10.1016/S1369-5274(00)00227-7.CrossRefPubMed
6.
go back to reference Balaji S, Babu MM, Iyer LM, Aravind L: Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains. Nucleic Acids Res. 2005, 33: 3994-4006. 10.1093/nar/gki709.PubMedCentralCrossRefPubMed Balaji S, Babu MM, Iyer LM, Aravind L: Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains. Nucleic Acids Res. 2005, 33: 3994-4006. 10.1093/nar/gki709.PubMedCentralCrossRefPubMed
7.
go back to reference Le Roch KG, Zhou Y, Blair PL, Grainger M, Moch JK, Haynes JD, De La Vega P, Holder AA, Batalov S, Carucci DJ, Winzeler EA: Discovery of gene function by expression profiling of the malaria parasite life cycle. Science. 2003, 301: 1503-1508. 10.1126/science.1087025.CrossRefPubMed Le Roch KG, Zhou Y, Blair PL, Grainger M, Moch JK, Haynes JD, De La Vega P, Holder AA, Batalov S, Carucci DJ, Winzeler EA: Discovery of gene function by expression profiling of the malaria parasite life cycle. Science. 2003, 301: 1503-1508. 10.1126/science.1087025.CrossRefPubMed
8.
go back to reference Bozdech Z, Llinas M, Pulliam BL, Wong ED, Zhu J, DeRisi JL: The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. PLoS Biol. 2003, 1: E5-10.1371/journal.pbio.0000005.PubMedCentralCrossRefPubMed Bozdech Z, Llinas M, Pulliam BL, Wong ED, Zhu J, DeRisi JL: The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. PLoS Biol. 2003, 1: E5-10.1371/journal.pbio.0000005.PubMedCentralCrossRefPubMed
9.
go back to reference Aravind L, Iyer LM, Wellems TE, Miller LH: Plasmodium biology: genomic gleanings. Cell. 2003, 115: 771-785. 10.1016/S0092-8674(03)01023-7.CrossRefPubMed Aravind L, Iyer LM, Wellems TE, Miller LH: Plasmodium biology: genomic gleanings. Cell. 2003, 115: 771-785. 10.1016/S0092-8674(03)01023-7.CrossRefPubMed
10.
go back to reference Scherf A, Riviere L, Lopez-Rubio JJ: SnapShot: var gene expression in the malaria parasite. Cell. 2008, 134: 190-10.1016/j.cell.2008.06.042.CrossRefPubMed Scherf A, Riviere L, Lopez-Rubio JJ: SnapShot: var gene expression in the malaria parasite. Cell. 2008, 134: 190-10.1016/j.cell.2008.06.042.CrossRefPubMed
11.
go back to reference Hiller NL, Bhattacharjee S, van Ooij C, Liolios K, Harrison T, Lopez-Estrano C, Haldar K: A host-targeting signal in virulence proteins reveals a secretome in malarial infection. Science. 2004, 306: 1934-1937. 10.1126/science.1102737.CrossRefPubMed Hiller NL, Bhattacharjee S, van Ooij C, Liolios K, Harrison T, Lopez-Estrano C, Haldar K: A host-targeting signal in virulence proteins reveals a secretome in malarial infection. Science. 2004, 306: 1934-1937. 10.1126/science.1102737.CrossRefPubMed
12.
go back to reference Marti M, Good RT, Rug M, Knuepfer E, Cowman AF: Targeting malaria virulence and remodeling proteins to the host erythrocyte. Science. 2004, 306: 1930-1933. 10.1126/science.1102452.CrossRefPubMed Marti M, Good RT, Rug M, Knuepfer E, Cowman AF: Targeting malaria virulence and remodeling proteins to the host erythrocyte. Science. 2004, 306: 1930-1933. 10.1126/science.1102452.CrossRefPubMed
13.
go back to reference Waller RF, Keeling PJ, Donald RG, Striepen B, Handman E, Lang-Unnasch N, Cowman AF, Besra GS, Roos DS, McFadden GI: Nuclear-encoded proteins target to the plastid in Toxoplasma gondii and Plasmodium falciparum. Proc Natl Acad Sci USA. 1998, 95: 12352-12357. 10.1073/pnas.95.21.12352.PubMedCentralCrossRefPubMed Waller RF, Keeling PJ, Donald RG, Striepen B, Handman E, Lang-Unnasch N, Cowman AF, Besra GS, Roos DS, McFadden GI: Nuclear-encoded proteins target to the plastid in Toxoplasma gondii and Plasmodium falciparum. Proc Natl Acad Sci USA. 1998, 95: 12352-12357. 10.1073/pnas.95.21.12352.PubMedCentralCrossRefPubMed
14.
go back to reference Tonkin CJ, Kalanon M, McFadden GI: Protein targeting to the malaria parasite plastid. Traffic. 2008, 9: 166-175.PubMed Tonkin CJ, Kalanon M, McFadden GI: Protein targeting to the malaria parasite plastid. Traffic. 2008, 9: 166-175.PubMed
15.
go back to reference Sato S, Rangachari K, Wilson RJ: Targeting GFP to the malarial mitochondrion. Mol Biochem Parasitol. 2003, 130: 155-158. 10.1016/S0166-6851(03)00166-X.CrossRefPubMed Sato S, Rangachari K, Wilson RJ: Targeting GFP to the malarial mitochondrion. Mol Biochem Parasitol. 2003, 130: 155-158. 10.1016/S0166-6851(03)00166-X.CrossRefPubMed
16.
go back to reference Giniger E, Varnum SM, Ptashne M: Specific DNA binding of GAL4, a positive regulatory protein of yeast. Cell. 1985, 40: 767-774. 10.1016/0092-8674(85)90336-8.CrossRefPubMed Giniger E, Varnum SM, Ptashne M: Specific DNA binding of GAL4, a positive regulatory protein of yeast. Cell. 1985, 40: 767-774. 10.1016/0092-8674(85)90336-8.CrossRefPubMed
17.
go back to reference West RW, Yocum RR, Ptashne M: Saccharomyces cerevisiae GAL1-GAL10 divergent promoter region: location and function of the upstream activating sequence UASG. Mol Cell Biol. 1984, 4: 2467-2478.PubMedCentralCrossRefPubMed West RW, Yocum RR, Ptashne M: Saccharomyces cerevisiae GAL1-GAL10 divergent promoter region: location and function of the upstream activating sequence UASG. Mol Cell Biol. 1984, 4: 2467-2478.PubMedCentralCrossRefPubMed
18.
go back to reference Silver PA, Keegan LP, Ptashne M: Amino terminus of the yeast GAL4 gene product is sufficient for nuclear localization. Proc Natl Acad Sci USA. 1984, 81: 5951-5955. 10.1073/pnas.81.19.5951.PubMedCentralCrossRefPubMed Silver PA, Keegan LP, Ptashne M: Amino terminus of the yeast GAL4 gene product is sufficient for nuclear localization. Proc Natl Acad Sci USA. 1984, 81: 5951-5955. 10.1073/pnas.81.19.5951.PubMedCentralCrossRefPubMed
19.
go back to reference Feliciello I, Chinali G: A modified alkaline lysis method for the preparation of highly purified plasmid DNA from Escherichia coli. Anal Biochem. 1993, 212: 394-401. 10.1006/abio.1993.1346.CrossRefPubMed Feliciello I, Chinali G: A modified alkaline lysis method for the preparation of highly purified plasmid DNA from Escherichia coli. Anal Biochem. 1993, 212: 394-401. 10.1006/abio.1993.1346.CrossRefPubMed
20.
go back to reference Trager W, Jensen JB: Human malaria parasites in continuous culture. Science. 1976, 193: 673-675. 10.1126/science.781840.CrossRefPubMed Trager W, Jensen JB: Human malaria parasites in continuous culture. Science. 1976, 193: 673-675. 10.1126/science.781840.CrossRefPubMed
21.
go back to reference Crabb BS, Triglia T, Waterkeyn JG, Cowman AF: Stable transgene expression in Plasmodium falciparum. Mol Biochem Parasitol. 1997, 90: 131-144. 10.1016/S0166-6851(97)00143-6.CrossRefPubMed Crabb BS, Triglia T, Waterkeyn JG, Cowman AF: Stable transgene expression in Plasmodium falciparum. Mol Biochem Parasitol. 1997, 90: 131-144. 10.1016/S0166-6851(97)00143-6.CrossRefPubMed
22.
go back to reference Uv AE, Roth P, Xylourgidis N, Wickberg A, Cantera R, Samakovlis C: members only encodes a Drosophila nucleoporin required for rel protein import and immune response activation. Genes Dev. 2000, 14: 1945-1957.PubMedCentralPubMed Uv AE, Roth P, Xylourgidis N, Wickberg A, Cantera R, Samakovlis C: members only encodes a Drosophila nucleoporin required for rel protein import and immune response activation. Genes Dev. 2000, 14: 1945-1957.PubMedCentralPubMed
23.
go back to reference Elbaum M: The nuclear pore complex: biochemical machine or Maxwell demon?. Comptes Rendus de l'Académie des Sciences - Series IV - Physics-Astrophysics. 2001, 2 (6): 861-870. 10.1016/S1296-2147(01)01229-X.CrossRef Elbaum M: The nuclear pore complex: biochemical machine or Maxwell demon?. Comptes Rendus de l'Académie des Sciences - Series IV - Physics-Astrophysics. 2001, 2 (6): 861-870. 10.1016/S1296-2147(01)01229-X.CrossRef
24.
go back to reference Frankel MB, Knoll LJ: The ins and outs of nuclear trafficking: unusual aspects in apicomplexan parasites. DNA Cell Biol. 2009, 28: 277-284. 10.1089/dna.2009.0853.PubMedCentralCrossRefPubMed Frankel MB, Knoll LJ: The ins and outs of nuclear trafficking: unusual aspects in apicomplexan parasites. DNA Cell Biol. 2009, 28: 277-284. 10.1089/dna.2009.0853.PubMedCentralCrossRefPubMed
25.
go back to reference Chan CK, Hubner S, Hu W, Jans DA: Mutual exclusivity of DNA binding and nuclear localization signal recognition by the yeast transcription factor GAL4: implications for nonviral DNA delivery. Gene Ther. 1998, 5: 1204-1212. 10.1038/sj.gt.3300708.CrossRefPubMed Chan CK, Hubner S, Hu W, Jans DA: Mutual exclusivity of DNA binding and nuclear localization signal recognition by the yeast transcription factor GAL4: implications for nonviral DNA delivery. Gene Ther. 1998, 5: 1204-1212. 10.1038/sj.gt.3300708.CrossRefPubMed
26.
go back to reference O'Donnell RA, Freitas-Junior LH, Preiser PR, Williamson DH, Duraisingh M, McElwain TF, Scherf A, Cowman AF, Crabb BS: A genetic screen for improved plasmid segregation reveals a role for Rep20 in the interaction of Plasmodium falciparum chromosomes. Embo J. 2002, 21: 1231-1239. 10.1093/emboj/21.5.1231.PubMedCentralCrossRefPubMed O'Donnell RA, Freitas-Junior LH, Preiser PR, Williamson DH, Duraisingh M, McElwain TF, Scherf A, Cowman AF, Crabb BS: A genetic screen for improved plasmid segregation reveals a role for Rep20 in the interaction of Plasmodium falciparum chromosomes. Embo J. 2002, 21: 1231-1239. 10.1093/emboj/21.5.1231.PubMedCentralCrossRefPubMed
Metadata
Title
A nuclear targeting system in Plasmodium falciparum
Authors
Kanjana Wittayacom
Chairat Uthaipibull
Krittikorn Kumpornsin
Ruchanok Tinikul
Theerarat Kochakarn
Pucharee Songprakhon
Thanat Chookajorn
Publication date
01-12-2010
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2010
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/1475-2875-9-126

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