Skip to main content
Top
Published in: Malaria Journal 1/2014

Open Access 01-12-2014 | Research

Detection of mixed infection level of Plasmodium falciparum and Plasmodium vivax by SYBR Green I-based real-time PCR in North Gondar, north-west Ethiopia

Authors: Addimas Tajebe, Gabriel Magoma, Mulugeta Aemero, Francis Kimani

Published in: Malaria Journal | Issue 1/2014

Login to get access

Abstract

Background

Malaria is caused by five Plasmodium species and transmitted by anopheline mosquitoes. It occurs in single and mixed infections. Mixed infection easily leads to misdiagnosis. Accurate detection of malaria species is vital. Therefore, the study was conducted to determine the level of mixed infection and misdiagnosis of malaria species in the study area using SYBR Green I-based real time PCR.

Methods

The study was conducted in seven health centres from North Gondar, north-west Ethiopia. The data of all febrile patients, who attended the outpatient department for malaria diagnosis, from October to December 2013, was recorded. Dried blood spots were prepared from 168 positive samples for molecular re-evaluation. Parasite DNA was extracted using a commercial kit and Plasmodium species were re-evaluated with SYBR Green I-based real time PCR to detect mixed infections and misdiagnosed mono-infections.

Results

Among 7343 patients who were diagnosed for malaria in six study sites within the second quarter of the Ethiopian fiscal year (2013) 1802 (24.54%) were positive for malaria parasite. Out of this, 1,216 (67.48%) Plasmodium falciparum, 553 (30.68%) Plasmodium vivax and 33 (1.8%) mixed infections of both species were recorded. The result showed high prevalence of P. falciparum and P. vivax, but very low prevalence of mixed infections. Among 168 samples collected on dried blood spot 7 (4.17%) were P. vivax, 158 (94.05%) were P. falciparum and 3 (1.80%) were mixed infections of both species. After re-evaluation 10 (5.95%) P. vivax, 112 (66.67%) P. falciparum, 21 (12.50%) P. falciparum + P. vivax mixed infection, and 17 (10.12%) Plasmodium ovale positive rate was recorded. The re-evaluation showed high level of mixed infection, and misdiagnosis of P. ovale and P. vivax.

Conclusions

The result shows that P. falciparum prevalence is higher than P. vivax in the study area. The results, obtained from SYBR Green I-based real time PCR, indicated that the diagnosis efficiency of microscopy is very low for species-specific and mixed infection detection. Therefore, real time PCR-based species diagnosis should be applied for clinical diagnosis and quality control purposes in order to prevent the advent of drug resistant strains due to misdiagnosis and mistreatment.
Appendix
Available only for authorised users
Literature
1.
go back to reference Petersen I, Eastman R, Lanzer M: Drug-resistant malaria: molecular mechanisms and implications for public health. FEBS Lett. 2011, 585: 1551-1562. 10.1016/j.febslet.2011.04.042.CrossRefPubMed Petersen I, Eastman R, Lanzer M: Drug-resistant malaria: molecular mechanisms and implications for public health. FEBS Lett. 2011, 585: 1551-1562. 10.1016/j.febslet.2011.04.042.CrossRefPubMed
2.
go back to reference Alemu A, Muluye D, Mihret M, Adugna M, Gebeyaw M: Ten year trend analysis of malaria prevalence in Kola Diba, North Gondar, Northwest Ethiopia. Parasit Vectors. 2012, 5: 173-10.1186/1756-3305-5-173.PubMedCentralCrossRefPubMed Alemu A, Muluye D, Mihret M, Adugna M, Gebeyaw M: Ten year trend analysis of malaria prevalence in Kola Diba, North Gondar, Northwest Ethiopia. Parasit Vectors. 2012, 5: 173-10.1186/1756-3305-5-173.PubMedCentralCrossRefPubMed
3.
go back to reference Buppan P, Putaporntip C, Pattanawong U, Seethamchai S, Jongwutiwes S: Comparative detection of Plasmodium vivax and Plasmodium falciparum DNA in saliva and urine samples from symptomatic malaria patients in a low endemic area. Malar J. 2010, 9: 72-10.1186/1475-2875-9-72.PubMedCentralCrossRefPubMed Buppan P, Putaporntip C, Pattanawong U, Seethamchai S, Jongwutiwes S: Comparative detection of Plasmodium vivax and Plasmodium falciparum DNA in saliva and urine samples from symptomatic malaria patients in a low endemic area. Malar J. 2010, 9: 72-10.1186/1475-2875-9-72.PubMedCentralCrossRefPubMed
4.
go back to reference Wongsrichanalai C, Barcus MJ, Muth S, Sutamihardja A, Wernsdorfer WH: A review of malaria diagnostic tools: microscopy and rapid diagnostic test (RDT). Am J Trop Med Hyg. 2007, 77: 119-127.PubMed Wongsrichanalai C, Barcus MJ, Muth S, Sutamihardja A, Wernsdorfer WH: A review of malaria diagnostic tools: microscopy and rapid diagnostic test (RDT). Am J Trop Med Hyg. 2007, 77: 119-127.PubMed
5.
go back to reference Obare P, Ogutu B, Adams M, Odera J, Lilley K, Dosoo D, Adhiambo C, Owusu-Agyei S, Binka F, Wanja E, Johnson J: Misclassification of Plasmodium infections by conventional microscopy and the impact of remedial training on the proficiency of laboratory technicians in species identification. Malar J. 2013, 12: 113-10.1186/1475-2875-12-113.PubMedCentralCrossRefPubMed Obare P, Ogutu B, Adams M, Odera J, Lilley K, Dosoo D, Adhiambo C, Owusu-Agyei S, Binka F, Wanja E, Johnson J: Misclassification of Plasmodium infections by conventional microscopy and the impact of remedial training on the proficiency of laboratory technicians in species identification. Malar J. 2013, 12: 113-10.1186/1475-2875-12-113.PubMedCentralCrossRefPubMed
6.
go back to reference Fançony C, Gamboa D, Sebastião Y, Hallett R, Sutherland C, Sousa-Figueiredo JC, Susana Vaz Nery S: Various pfcrt and pfmdr1 genotypes of Plasmodium falciparum co-circulate with P. malariae, P. ovale spp., and P. vivax in Northern Angola. Antimicrob Agents Chemother. 2012, 56: 5271-5271. 10.1128/AAC.00559-12.PubMedCentralCrossRefPubMed Fançony C, Gamboa D, Sebastião Y, Hallett R, Sutherland C, Sousa-Figueiredo JC, Susana Vaz Nery S: Various pfcrt and pfmdr1 genotypes of Plasmodium falciparum co-circulate with P. malariae, P. ovale spp., and P. vivax in Northern Angola. Antimicrob Agents Chemother. 2012, 56: 5271-5271. 10.1128/AAC.00559-12.PubMedCentralCrossRefPubMed
7.
go back to reference Mohapatra MK, Dash LK, Bariha PK, Karua PC: Profile of mixed species (Plasmodium vivax and falciparum) malaria in adults. J Assoc Physicians India. 2012, 60: 20-24.PubMed Mohapatra MK, Dash LK, Bariha PK, Karua PC: Profile of mixed species (Plasmodium vivax and falciparum) malaria in adults. J Assoc Physicians India. 2012, 60: 20-24.PubMed
8.
go back to reference Yohannes AM, Teklehaimanot A, Bergqvist Y, Ringwald P: Confirmed vivax resistance to chloroquine and effectiveness of artemether-lumefantrine for the treatment of vivax malaria in Ethiopia. Am J Trop Med Hyg. 2011, 84: 137-140. 10.4269/ajtmh.2011.09-0723.PubMedCentralCrossRefPubMed Yohannes AM, Teklehaimanot A, Bergqvist Y, Ringwald P: Confirmed vivax resistance to chloroquine and effectiveness of artemether-lumefantrine for the treatment of vivax malaria in Ethiopia. Am J Trop Med Hyg. 2011, 84: 137-140. 10.4269/ajtmh.2011.09-0723.PubMedCentralCrossRefPubMed
9.
go back to reference Mula P, Fernández-Martínez A, Lucio A, Ramos JM, Reyes F, González V, Benito A, Berzosa P: Detection of high levels of mutations involved in anti-malarial drug resistance in Plasmodium falciparum and Plasmodium vivax at a rural hospital in Southern Ethiopia. Malar J. 2011, 10: 214-10.1186/1475-2875-10-214.PubMedCentralCrossRefPubMed Mula P, Fernández-Martínez A, Lucio A, Ramos JM, Reyes F, González V, Benito A, Berzosa P: Detection of high levels of mutations involved in anti-malarial drug resistance in Plasmodium falciparum and Plasmodium vivax at a rural hospital in Southern Ethiopia. Malar J. 2011, 10: 214-10.1186/1475-2875-10-214.PubMedCentralCrossRefPubMed
10.
go back to reference Lee G, Jeon E, Le Tien D, Kim T, Yoo J, Yong Kim H, Chong C: Development and Evaluation of a rapid diagnostic test for P. falciparum, P. vivax and mixed-species malaria antigens. Am J Trop Med Hyg. 2011, 85: 989-993. 10.4269/ajtmh.2011.11-0265.PubMedCentralCrossRefPubMed Lee G, Jeon E, Le Tien D, Kim T, Yoo J, Yong Kim H, Chong C: Development and Evaluation of a rapid diagnostic test for P. falciparum, P. vivax and mixed-species malaria antigens. Am J Trop Med Hyg. 2011, 85: 989-993. 10.4269/ajtmh.2011.11-0265.PubMedCentralCrossRefPubMed
11.
go back to reference Zakeri S, Kakar Q, Ghasemi F, Raeisi A, Butt W, Safi N, Afsharpad M, Memon MS, Gholizadeh S, Salehi M, Atta H, Zamani G, Djadid ND: Detection of mixed P. falciparum & P. vivax infections by nested-PCR in Pakistan, Iran & Afghanistan. Indian J Med Res. 2010, 132: 31-35.PubMed Zakeri S, Kakar Q, Ghasemi F, Raeisi A, Butt W, Safi N, Afsharpad M, Memon MS, Gholizadeh S, Salehi M, Atta H, Zamani G, Djadid ND: Detection of mixed P. falciparum & P. vivax infections by nested-PCR in Pakistan, Iran & Afghanistan. Indian J Med Res. 2010, 132: 31-35.PubMed
12.
go back to reference Barber B, William T, Grigg J, Yeo T, Anstey N: Limitations of microscopy to differentiate Plasmodium species in a region co-endemic for Plasmodium falciparum, Plasmodium vivax and Plasmodium knowlesi. Malar J. 2013, 12: 8-10.1186/1475-2875-12-8.PubMedCentralCrossRefPubMed Barber B, William T, Grigg J, Yeo T, Anstey N: Limitations of microscopy to differentiate Plasmodium species in a region co-endemic for Plasmodium falciparum, Plasmodium vivax and Plasmodium knowlesi. Malar J. 2013, 12: 8-10.1186/1475-2875-12-8.PubMedCentralCrossRefPubMed
13.
go back to reference Golassa L, Enweji N, Erko B, Aseffa A, Swedberg G: Detection of a substantial number of submicroscopic Plasmodium falciparum infections by polymerase chain reaction: a potential threat to malaria control and diagnosis in Ethiopia. Malar J. 2013, 12: 352-10.1186/1475-2875-12-352.PubMedCentralCrossRefPubMed Golassa L, Enweji N, Erko B, Aseffa A, Swedberg G: Detection of a substantial number of submicroscopic Plasmodium falciparum infections by polymerase chain reaction: a potential threat to malaria control and diagnosis in Ethiopia. Malar J. 2013, 12: 352-10.1186/1475-2875-12-352.PubMedCentralCrossRefPubMed
14.
go back to reference Rantala AM, Taylor SM, Trottman PA, Luntamo M, Mbewe B, Maleta K, Kulmala T, Ashorn P, Meshnick SR: Comparison of real-time PCR and microscopy for malaria parasite detection in Malawian Pregnant Women. Malar J. 2010, 9: 269-10.1186/1475-2875-9-269.PubMedCentralCrossRefPubMed Rantala AM, Taylor SM, Trottman PA, Luntamo M, Mbewe B, Maleta K, Kulmala T, Ashorn P, Meshnick SR: Comparison of real-time PCR and microscopy for malaria parasite detection in Malawian Pregnant Women. Malar J. 2010, 9: 269-10.1186/1475-2875-9-269.PubMedCentralCrossRefPubMed
15.
go back to reference Cnops L, Jacobs J, Van Esbroeck M: Validation of a four-primer real-time PCR as a diagnostic tool for single and mixed Plasmodium infections. Clin Microl Biol Infect. 2010, 17: 1101-1107.CrossRef Cnops L, Jacobs J, Van Esbroeck M: Validation of a four-primer real-time PCR as a diagnostic tool for single and mixed Plasmodium infections. Clin Microl Biol Infect. 2010, 17: 1101-1107.CrossRef
16.
go back to reference Mangold KA, Manson RU, Koay ES, Stephens L, Regner M, Thomson RB, Peterson LR, Kaul KL: Real-time PCR for detection and identification of Plasmodium spp. J Clin Microbiol. 2005, 43: 2435-2440. 10.1128/JCM.43.5.2435-2440.2005.PubMedCentralCrossRefPubMed Mangold KA, Manson RU, Koay ES, Stephens L, Regner M, Thomson RB, Peterson LR, Kaul KL: Real-time PCR for detection and identification of Plasmodium spp. J Clin Microbiol. 2005, 43: 2435-2440. 10.1128/JCM.43.5.2435-2440.2005.PubMedCentralCrossRefPubMed
17.
go back to reference Demas A, Oberstaller J, DeBarry J, Lucchi NW, Srinivasamoorthy G, Sumari D, Kabanywanyi AM, Villegas L, Escalante AA, Kachur SP, Barnwell JW, Peterson DS, Udhayakumar V, Kissinger JC: Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA. J Clin Microbiol. 2011, 49: 2411-2418. 10.1128/JCM.02603-10.PubMedCentralCrossRefPubMed Demas A, Oberstaller J, DeBarry J, Lucchi NW, Srinivasamoorthy G, Sumari D, Kabanywanyi AM, Villegas L, Escalante AA, Kachur SP, Barnwell JW, Peterson DS, Udhayakumar V, Kissinger JC: Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA. J Clin Microbiol. 2011, 49: 2411-2418. 10.1128/JCM.02603-10.PubMedCentralCrossRefPubMed
18.
go back to reference Ouattara AF, Dagnogo M, Olliaro PL, Raso G, Tanner M, Utzinger J, Koudou BG: Plasmodium falciparum infection and clinical indicators in relation to net coverage in Central Côte d’Ivoire. Parasit Vectors. 2014, 7: 306-10.1186/1756-3305-7-306.PubMedCentralCrossRefPubMed Ouattara AF, Dagnogo M, Olliaro PL, Raso G, Tanner M, Utzinger J, Koudou BG: Plasmodium falciparum infection and clinical indicators in relation to net coverage in Central Côte d’Ivoire. Parasit Vectors. 2014, 7: 306-10.1186/1756-3305-7-306.PubMedCentralCrossRefPubMed
19.
go back to reference Alemu A, Fuehrer H, Getnet G, Tessema B, Noedl H: Plasmodium ovale curtisi and Plasmodium ovale wallikeri in North-West Ethiopia. Malar J. 2013, 12: 346-10.1186/1475-2875-12-346.PubMedCentralCrossRefPubMed Alemu A, Fuehrer H, Getnet G, Tessema B, Noedl H: Plasmodium ovale curtisi and Plasmodium ovale wallikeri in North-West Ethiopia. Malar J. 2013, 12: 346-10.1186/1475-2875-12-346.PubMedCentralCrossRefPubMed
20.
go back to reference Kebede S, Aseffa A, Medhin G, Berhe N, Velavan TP: Re-evaluation of microscopy confirmed Plasmodium falciparum and Plasmodium vivax malaria by nested PCR detection in Southern Ethiopia. Malar J. 2014, 13: 48-10.1186/1475-2875-13-48.CrossRef Kebede S, Aseffa A, Medhin G, Berhe N, Velavan TP: Re-evaluation of microscopy confirmed Plasmodium falciparum and Plasmodium vivax malaria by nested PCR detection in Southern Ethiopia. Malar J. 2014, 13: 48-10.1186/1475-2875-13-48.CrossRef
21.
go back to reference Rougemont M, Van Saanen M, Sahli R, Hinrikson HP, Bille J, Jaton K: Detection of four Plasmodium species in blood from humans by 18S rRNA gene subunit-based and species-specific real-time PCR assays. J Clin Microbiol. 2004, 42: 5636-5643. 10.1128/JCM.42.12.5636-5643.2004.PubMedCentralCrossRefPubMed Rougemont M, Van Saanen M, Sahli R, Hinrikson HP, Bille J, Jaton K: Detection of four Plasmodium species in blood from humans by 18S rRNA gene subunit-based and species-specific real-time PCR assays. J Clin Microbiol. 2004, 42: 5636-5643. 10.1128/JCM.42.12.5636-5643.2004.PubMedCentralCrossRefPubMed
22.
go back to reference Shokoples SE, Ndao M, Kowalewska-Grochowska K, Yanow SK: Multiplexed real-time PCR assay for discrimination of Plasmodium species with improved sensitivity for mixed infections. J Clin Microbiol. 2009, 47: 975-980. 10.1128/JCM.01858-08.PubMedCentralCrossRefPubMed Shokoples SE, Ndao M, Kowalewska-Grochowska K, Yanow SK: Multiplexed real-time PCR assay for discrimination of Plasmodium species with improved sensitivity for mixed infections. J Clin Microbiol. 2009, 47: 975-980. 10.1128/JCM.01858-08.PubMedCentralCrossRefPubMed
23.
go back to reference Swan H, Sloan L, Muyombwe A, Chavalitshewinkoon-Petmitr P, Krudsood S, Leowattana W, Wilairatana P, Looareesuwan S, Rosenblatt J: Evaluation of a real-time polymerase chain reaction assay for the diagnosis of malaria in patients from Thailand. Am J Trop Med Hyg. 2005, 73: 850-854.PubMed Swan H, Sloan L, Muyombwe A, Chavalitshewinkoon-Petmitr P, Krudsood S, Leowattana W, Wilairatana P, Looareesuwan S, Rosenblatt J: Evaluation of a real-time polymerase chain reaction assay for the diagnosis of malaria in patients from Thailand. Am J Trop Med Hyg. 2005, 73: 850-854.PubMed
24.
go back to reference Taylor BJ, Martin KA, Arango E, Agudelo OM, Maestre A, Yanow SK: Real-Time PCR detection of Plasmodium directly from whole blood and filter paper samples. Malar J. 2011, 10: 244-10.1186/1475-2875-10-244.PubMedCentralCrossRefPubMed Taylor BJ, Martin KA, Arango E, Agudelo OM, Maestre A, Yanow SK: Real-Time PCR detection of Plasmodium directly from whole blood and filter paper samples. Malar J. 2011, 10: 244-10.1186/1475-2875-10-244.PubMedCentralCrossRefPubMed
Metadata
Title
Detection of mixed infection level of Plasmodium falciparum and Plasmodium vivax by SYBR Green I-based real-time PCR in North Gondar, north-west Ethiopia
Authors
Addimas Tajebe
Gabriel Magoma
Mulugeta Aemero
Francis Kimani
Publication date
01-12-2014
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2014
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/1475-2875-13-411

Other articles of this Issue 1/2014

Malaria Journal 1/2014 Go to the issue