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Published in: Malaria Journal 1/2012

Open Access 01-12-2012 | Methodology

Comparison of molecular tests for the diagnosis of malaria in Honduras

Authors: Gustavo A Fontecha, Meisy Mendoza, Engels Banegas, Mitra Poorak, Alexandre M De Oliveira, Tamara Mancero, Venkatachalam Udhayakumar, Naomi W Lucchi, Rosa E Mejia

Published in: Malaria Journal | Issue 1/2012

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Abstract

Background

Honduras is a tropical country with more than 70% of its population living at risk of being infected with either Plasmodium vivax or Plasmodium falciparum. Laboratory diagnosis is a very important factor for adequate treatment and management of malaria. In Honduras, malaria is diagnosed by both, microscopy and rapid diagnostic tests and to date, no molecular methods have been implemented for routine diagnosis. However, since mixed infections, and asymptomatic and low-parasitaemic cases are difficult to detect by light microscopy alone, identifying appropriate molecular tools for diagnostic applications in Honduras deserves further study. The present study investigated the utility of different molecular tests for the diagnosis of malaria in Honduras.

Methods

A total of 138 blood samples collected as part of a clinical trial to assess the efficacy of chloroquine were used: 69 microscopically confirmed P. falciparum positive samples obtained on the day of enrolment and 69 follow-up samples obtained 28 days after chloroquine treatment and shown to be malaria negative by microscopy. Sensitivity and specificity of microscopy was compared to an 18 s ribosomal RNA gene-based nested PCR, two single-PCR reactions designed to detect Plasmodium falciparum infections, one single-PCR to detect Plasmodium vivax infections, and one multiplex one-step PCR reaction to detect both parasite species.

Results

Of the 69 microscopically positive P. falciparum samples, 68 were confirmed to be P. falciparum-positive by two of the molecular tests used. The one sample not detected as P. falciparum by any of the molecular tests was shown to be P. vivax-positive by a reference molecular test indicating a misdiagnosis by microscopy. The reference molecular test detected five cases of P. vivax/P. falciparum mixed infections, which were not recognized by microscopy as mixed infections. Only two of these mixed infections were recognized by a multiplex test while a P. vivax-specific polymerase chain reaction (PCR) detected three of them. In addition, one of the day 28 samples, previously determined to be malaria negative by microscopy, was shown to be P. vivax-positive by three of the molecular tests specific for this parasite.

Conclusions

Molecular tests are valuable tools for the confirmation of Plasmodium species and in detecting mixed infections in malaria endemic regions.
Literature
1.
go back to reference Banjara MR, Sirawaraporn W, Petmitr S, Imwong M, Joshi AB, Chavalitshewinkoon-Petmitr P: Characteristics and risk factors of Plasmodium falciparum malaria in Eastern and Central Nepal. Kathmandu Univ Med J (KUMJ). 2009, 7: 378-382. Banjara MR, Sirawaraporn W, Petmitr S, Imwong M, Joshi AB, Chavalitshewinkoon-Petmitr P: Characteristics and risk factors of Plasmodium falciparum malaria in Eastern and Central Nepal. Kathmandu Univ Med J (KUMJ). 2009, 7: 378-382.
2.
go back to reference Payne D: Use and limitations of light microscopy for diagnosing malaria at the primary health care level. Bull World Health Organ. 1988, 66: 621-626.PubMedCentralPubMed Payne D: Use and limitations of light microscopy for diagnosing malaria at the primary health care level. Bull World Health Organ. 1988, 66: 621-626.PubMedCentralPubMed
3.
go back to reference Hanscheid T, Grobusch MP: How useful is PCR in the diagnosis of malaria?. Trends Parasitol. 2002, 18: 395-398. 10.1016/S1471-4922(02)02348-6.CrossRefPubMed Hanscheid T, Grobusch MP: How useful is PCR in the diagnosis of malaria?. Trends Parasitol. 2002, 18: 395-398. 10.1016/S1471-4922(02)02348-6.CrossRefPubMed
4.
go back to reference Fuehrer HP, Fally MA, Habler VE, Starzengruber P, Swoboda P, Noedl H: Novel nested direct PCR technique for malaria diagnosis using filter paper samples. J Clin Microbiol. 2011, 49: 1628-1630. 10.1128/JCM.01792-10.PubMedCentralCrossRefPubMed Fuehrer HP, Fally MA, Habler VE, Starzengruber P, Swoboda P, Noedl H: Novel nested direct PCR technique for malaria diagnosis using filter paper samples. J Clin Microbiol. 2011, 49: 1628-1630. 10.1128/JCM.01792-10.PubMedCentralCrossRefPubMed
5.
go back to reference Kano S, Tsuzuki K, Inaba H, Onda T, Masuda G, Suzuki M: DNA diagnosis of Plasmodium falciparum malaria by single-tube PCR. Kansenshogaku Zasshi. 1997, 71: 1090-1092.CrossRefPubMed Kano S, Tsuzuki K, Inaba H, Onda T, Masuda G, Suzuki M: DNA diagnosis of Plasmodium falciparum malaria by single-tube PCR. Kansenshogaku Zasshi. 1997, 71: 1090-1092.CrossRefPubMed
6.
go back to reference Osman MM, Nour BY, Sedig MF, De Bes L, Babikir AM, Mohamedani AA, Mens PF: Informed decision-making before changing to RDT: a comparison of microscopy, rapid diagnostic test and molecular techniques for the diagnosis and identification of malaria parasites in Kassala, eastern Sudan. Trop Med Int Health. 2010, 15: 1442-1448. 10.1111/j.1365-3156.2010.02659.x.CrossRefPubMed Osman MM, Nour BY, Sedig MF, De Bes L, Babikir AM, Mohamedani AA, Mens PF: Informed decision-making before changing to RDT: a comparison of microscopy, rapid diagnostic test and molecular techniques for the diagnosis and identification of malaria parasites in Kassala, eastern Sudan. Trop Med Int Health. 2010, 15: 1442-1448. 10.1111/j.1365-3156.2010.02659.x.CrossRefPubMed
7.
go back to reference Parija SC: PCR for diagnosis of malaria. Indian J Med Res. 2010, 132: 9-10.PubMed Parija SC: PCR for diagnosis of malaria. Indian J Med Res. 2010, 132: 9-10.PubMed
8.
go back to reference Rubio JM, Roche J, Berzosa PJ, Moyano E, Benito A: The potential utility of the Semi-Nested Multiplex PCR technique for the diagnosis and investigation of congenital malaria. Diagn Microbiol Infect Dis. 2000, 38: 233-236. 10.1016/S0732-8893(00)00204-2.CrossRefPubMed Rubio JM, Roche J, Berzosa PJ, Moyano E, Benito A: The potential utility of the Semi-Nested Multiplex PCR technique for the diagnosis and investigation of congenital malaria. Diagn Microbiol Infect Dis. 2000, 38: 233-236. 10.1016/S0732-8893(00)00204-2.CrossRefPubMed
9.
go back to reference Vo TK, Bigot P, Gazin P, Sinou V, De Pina JJ, Huynh DC, Fumoux F, Parzy D: Evaluation of a real-time PCR assay for malaria diagnosis in patients from Vietnam and in returned travellers. Trans R Soc Trop Med Hyg. 2007, 101: 422-428. 10.1016/j.trstmh.2006.09.004.CrossRefPubMed Vo TK, Bigot P, Gazin P, Sinou V, De Pina JJ, Huynh DC, Fumoux F, Parzy D: Evaluation of a real-time PCR assay for malaria diagnosis in patients from Vietnam and in returned travellers. Trans R Soc Trop Med Hyg. 2007, 101: 422-428. 10.1016/j.trstmh.2006.09.004.CrossRefPubMed
10.
go back to reference Gilks C, Pasvol G, Juel-Jensen B: Mixed malarial infection due to Plasmodium falciparum and P vivax. Br Med J (Clin Res Ed). 1985, 291: 603-604.CrossRef Gilks C, Pasvol G, Juel-Jensen B: Mixed malarial infection due to Plasmodium falciparum and P vivax. Br Med J (Clin Res Ed). 1985, 291: 603-604.CrossRef
11.
go back to reference Mixson-Hayden T, Lucchi NW, Udhayakumar V: Evaluation of three PCR-based diagnostic assays for detecting mixed Plasmodium infection. BMC Res Notes. 2010, 3: 88-10.1186/1756-0500-3-88.PubMedCentralCrossRefPubMed Mixson-Hayden T, Lucchi NW, Udhayakumar V: Evaluation of three PCR-based diagnostic assays for detecting mixed Plasmodium infection. BMC Res Notes. 2010, 3: 88-10.1186/1756-0500-3-88.PubMedCentralCrossRefPubMed
12.
go back to reference Savioli L, de Felici A, Grazia Paglia M, Visco G: Mixed malarial infection due to Plasmodium falciparum and P vivax. Br Med J (Clin Res Ed). 1985, 291: 23-24.CrossRef Savioli L, de Felici A, Grazia Paglia M, Visco G: Mixed malarial infection due to Plasmodium falciparum and P vivax. Br Med J (Clin Res Ed). 1985, 291: 23-24.CrossRef
13.
go back to reference Ebrahimzadeh A, Fouladi B, Fazaeli A: High rate of detection of mixed infections of Plasmodium vivax and Plasmodium falciparum in South-East of Iran, using nested PCR. Parasitol Int. 2007, 56: 61-64. 10.1016/j.parint.2006.12.001.CrossRefPubMed Ebrahimzadeh A, Fouladi B, Fazaeli A: High rate of detection of mixed infections of Plasmodium vivax and Plasmodium falciparum in South-East of Iran, using nested PCR. Parasitol Int. 2007, 56: 61-64. 10.1016/j.parint.2006.12.001.CrossRefPubMed
14.
go back to reference Snounou G, Viriyakosol S, Jarra W, Thaithong S, Brown KN: Identification of the four human malaria parasite species in field samples by the polymerase chain reaction and detection of a high prevalence of mixed infections. Mol Biochem Parasitol. 1993, 58: 283-292. 10.1016/0166-6851(93)90050-8.CrossRefPubMed Snounou G, Viriyakosol S, Jarra W, Thaithong S, Brown KN: Identification of the four human malaria parasite species in field samples by the polymerase chain reaction and detection of a high prevalence of mixed infections. Mol Biochem Parasitol. 1993, 58: 283-292. 10.1016/0166-6851(93)90050-8.CrossRefPubMed
15.
go back to reference Demas A, Oberstaller J, Debarry J, Lucchi NW, Srinivasamoorthy G, Sumari D, Kabanywanyi AM, Villegas L, Escalante AA, Kachur SP, Barnwell JW, Peterson DS, Udhayakumar V, Kissinger JC: Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA. J Clin Microbiol. 2011, 49: 2411-2418. 10.1128/JCM.02603-10.PubMedCentralCrossRefPubMed Demas A, Oberstaller J, Debarry J, Lucchi NW, Srinivasamoorthy G, Sumari D, Kabanywanyi AM, Villegas L, Escalante AA, Kachur SP, Barnwell JW, Peterson DS, Udhayakumar V, Kissinger JC: Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA. J Clin Microbiol. 2011, 49: 2411-2418. 10.1128/JCM.02603-10.PubMedCentralCrossRefPubMed
16.
go back to reference Singh B, Bobogare A, Cox-Singh J, Snounou G, Abdullah MS, Rahman HA: A genus- and species-specific nested polymerase chain reaction malaria detection assay for epidemiologic studies. AmJTrop Med Hyg. 1999, 60: 687-692. Singh B, Bobogare A, Cox-Singh J, Snounou G, Abdullah MS, Rahman HA: A genus- and species-specific nested polymerase chain reaction malaria detection assay for epidemiologic studies. AmJTrop Med Hyg. 1999, 60: 687-692.
17.
go back to reference Barker RH, Banchongaksorn T, Courval JM, Suwonkerd W, Rimwungtragoon K, Wirth DF: Plasmodium falciparum and P. vivax: factors affecting sensitivity and specificity of PCR-based diagnosis of malaria. Exp Parasitol. 1994, 79: 41-49. 10.1006/expr.1994.1057.CrossRefPubMed Barker RH, Banchongaksorn T, Courval JM, Suwonkerd W, Rimwungtragoon K, Wirth DF: Plasmodium falciparum and P. vivax: factors affecting sensitivity and specificity of PCR-based diagnosis of malaria. Exp Parasitol. 1994, 79: 41-49. 10.1006/expr.1994.1057.CrossRefPubMed
18.
go back to reference Tham JM, Lee SH, Tan TM, Ting RC, Kara UA: Detection and species determination of malaria parasites by PCR: comparison with microscopy and with ParaSight-F and ICT malaria Pf tests in a clinical environment. J Clin Microbiol. 1999, 37: 1269-1273.PubMedCentralPubMed Tham JM, Lee SH, Tan TM, Ting RC, Kara UA: Detection and species determination of malaria parasites by PCR: comparison with microscopy and with ParaSight-F and ICT malaria Pf tests in a clinical environment. J Clin Microbiol. 1999, 37: 1269-1273.PubMedCentralPubMed
19.
go back to reference Mayxay M, Pukritrayakamee S, Chotivanich K, Imwong M, Looareesuwan S, White NJ: Identification of cryptic coinfection with Plasmodium falciparum in patients presenting with vivax malaria. AmJTrop Med Hyg. 2001, 65: 588-592. Mayxay M, Pukritrayakamee S, Chotivanich K, Imwong M, Looareesuwan S, White NJ: Identification of cryptic coinfection with Plasmodium falciparum in patients presenting with vivax malaria. AmJTrop Med Hyg. 2001, 65: 588-592.
20.
go back to reference Mueller I, Zimmerman PA, Reeder JC: Plasmodium malariae and Plasmodium ovale–the “bashful” malaria parasites. Trends Parasitol. 2007, 23: 278-283. 10.1016/j.pt.2007.04.009.PubMedCentralCrossRefPubMed Mueller I, Zimmerman PA, Reeder JC: Plasmodium malariae and Plasmodium ovale–the “bashful” malaria parasites. Trends Parasitol. 2007, 23: 278-283. 10.1016/j.pt.2007.04.009.PubMedCentralCrossRefPubMed
21.
go back to reference Zimmerman PA, Mehlotra RK, Kasehagen LJ, Kazura JW: Why do we need to know more about mixed Plasmodium species infections in humans?. Trends Parasitol. 2004, 20: 440-447. 10.1016/j.pt.2004.07.004.PubMedCentralCrossRefPubMed Zimmerman PA, Mehlotra RK, Kasehagen LJ, Kazura JW: Why do we need to know more about mixed Plasmodium species infections in humans?. Trends Parasitol. 2004, 20: 440-447. 10.1016/j.pt.2004.07.004.PubMedCentralCrossRefPubMed
22.
go back to reference Mueller I, Galinski MR, Baird JK, Carlton JM, Kochar DK, Alonso PL, del Portillo HA: Key gaps in the knowledge of Plasmodium vivax, a neglected human malaria parasite. Lancet Infect Dis. 2009, 9: 555-566. 10.1016/S1473-3099(09)70177-X.CrossRefPubMed Mueller I, Galinski MR, Baird JK, Carlton JM, Kochar DK, Alonso PL, del Portillo HA: Key gaps in the knowledge of Plasmodium vivax, a neglected human malaria parasite. Lancet Infect Dis. 2009, 9: 555-566. 10.1016/S1473-3099(09)70177-X.CrossRefPubMed
23.
go back to reference Padley D, Moody AH, Chiodini PL, Saldanha J: Use of a rapid, single-round, multiplex PCR to detect malarial parasites and identify the species present. Ann Trop Med Parasitol. 2003, 97: 131-137. 10.1179/000349803125002977.CrossRefPubMed Padley D, Moody AH, Chiodini PL, Saldanha J: Use of a rapid, single-round, multiplex PCR to detect malarial parasites and identify the species present. Ann Trop Med Parasitol. 2003, 97: 131-137. 10.1179/000349803125002977.CrossRefPubMed
Metadata
Title
Comparison of molecular tests for the diagnosis of malaria in Honduras
Authors
Gustavo A Fontecha
Meisy Mendoza
Engels Banegas
Mitra Poorak
Alexandre M De Oliveira
Tamara Mancero
Venkatachalam Udhayakumar
Naomi W Lucchi
Rosa E Mejia
Publication date
01-12-2012
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2012
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/1475-2875-11-119

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