Skip to main content
Top
Published in: Malaria Journal 1/2011

Open Access 01-12-2011 | Methodology

Automated and unsupervised detection of malarial parasites in microscopic images

Authors: Yashasvi Purwar, Sirish L Shah, Gwen Clarke, Areej Almugairi, Atis Muehlenbachs

Published in: Malaria Journal | Issue 1/2011

Login to get access

Abstract

Background

Malaria is a serious infectious disease. According to the World Health Organization, it is responsible for nearly one million deaths each year. There are various techniques to diagnose malaria of which manual microscopy is considered to be the gold standard. However due to the number of steps required in manual assessment, this diagnostic method is time consuming (leading to late diagnosis) and prone to human error (leading to erroneous diagnosis), even in experienced hands. The focus of this study is to develop a robust, unsupervised and sensitive malaria screening technique with low material cost and one that has an advantage over other techniques in that it minimizes human reliance and is, therefore, more consistent in applying diagnostic criteria.

Method

A method based on digital image processing of Giemsa-stained thin smear image is developed to facilitate the diagnostic process. The diagnosis procedure is divided into two parts; enumeration and identification. The image-based method presented here is designed to automate the process of enumeration and identification; with the main advantage being its ability to carry out the diagnosis in an unsupervised manner and yet have high sensitivity and thus reducing cases of false negatives.

Results

The image based method is tested over more than 500 images from two independent laboratories. The aim is to distinguish between positive and negative cases of malaria using thin smear blood slide images. Due to the unsupervised nature of method it requires minimal human intervention thus speeding up the whole process of diagnosis. Overall sensitivity to capture cases of malaria is 100% and specificity ranges from 50-88% for all species of malaria parasites.

Conclusion

Image based screening method will speed up the whole process of diagnosis and is more advantageous over laboratory procedures that are prone to errors and where pathological expertise is minimal. Further this method provides a consistent and robust way of generating the parasite clearance curves.
Appendix
Available only for authorised users
Literature
1.
go back to reference WHO: World Malaria Report 2008. 2008, World Health Organization, Geneva, Tech Reports WHO: World Malaria Report 2008. 2008, World Health Organization, Geneva, Tech Reports
2.
go back to reference Hanschheid T: Diagnosis of malaria: a review of alternative to conventional microscopy. Clin Lab Haematol. 1999, 21: 235-245. 10.1046/j.1365-2257.1999.00220.x. Hanschheid T: Diagnosis of malaria: a review of alternative to conventional microscopy. Clin Lab Haematol. 1999, 21: 235-245. 10.1046/j.1365-2257.1999.00220.x.
3.
go back to reference WHO: Basic Microscopy Part 1. Learner's guide. 1991, World Health Organization WHO: Basic Microscopy Part 1. Learner's guide. 1991, World Health Organization
4.
go back to reference Rao KNRM: Application of mathematical morphology to biomedical image processing. PhD Thesis. 2004, University of Westminster Rao KNRM: Application of mathematical morphology to biomedical image processing. PhD Thesis. 2004, University of Westminster
5.
go back to reference Rao KNRM, Dempster AG, Jarra B, Khan S: Automatic scanning of malaria infected blood slide images using mathematical morphology. Proc IEE Semin Med Appl of Signal Process, London, UK. 2002 Rao KNRM, Dempster AG, Jarra B, Khan S: Automatic scanning of malaria infected blood slide images using mathematical morphology. Proc IEE Semin Med Appl of Signal Process, London, UK. 2002
6.
go back to reference Tek FB, Dempster AG, Kale I: Parasite detection and identification for automated thin blood film malaria diagnosis. Comput Vision and Image Understanding. 2010, 114: 21-32. 10.1016/j.cviu.2009.08.003. Tek FB, Dempster AG, Kale I: Parasite detection and identification for automated thin blood film malaria diagnosis. Comput Vision and Image Understanding. 2010, 114: 21-32. 10.1016/j.cviu.2009.08.003.
7.
go back to reference Tek FB, Dempster AG, Kale I: Computer vision for microscopy diagnosis of malaria. Malar J. 2009, 8: 153-10.1186/1475-2875-8-153.PubMedCentralPubMed Tek FB, Dempster AG, Kale I: Computer vision for microscopy diagnosis of malaria. Malar J. 2009, 8: 153-10.1186/1475-2875-8-153.PubMedCentralPubMed
8.
go back to reference Sio SW, Sun W, Kumar S, Bin WZ, Tan SS, Ong SH, Kikuchi H, Oshima Y, Tan KS: MalariaCount: an image analysis-based program for the accurate determination of parasitaemia. J Microbiol Meth. 2007, 68: 11-18. 10.1016/j.mimet.2006.05.017. Sio SW, Sun W, Kumar S, Bin WZ, Tan SS, Ong SH, Kikuchi H, Oshima Y, Tan KS: MalariaCount: an image analysis-based program for the accurate determination of parasitaemia. J Microbiol Meth. 2007, 68: 11-18. 10.1016/j.mimet.2006.05.017.
9.
go back to reference Ross NE, Pritchard CJ, Rubin DM, Duse : Automated image processing method for the diagnosis and classification of malaria on thin blood smears. Med Biol Eng Comput. 2006, 44: 427-436. 10.1007/s11517-006-0044-2.PubMed Ross NE, Pritchard CJ, Rubin DM, Duse : Automated image processing method for the diagnosis and classification of malaria on thin blood smears. Med Biol Eng Comput. 2006, 44: 427-436. 10.1007/s11517-006-0044-2.PubMed
10.
go back to reference Gonzalez RC, Woods RE: Digital Image Processing. 2001, Prentice Hall, 2 Gonzalez RC, Woods RE: Digital Image Processing. 2001, Prentice Hall, 2
11.
go back to reference Gonzalez RC, Woods RE, Eddins SL: Digital Image Processing using MATLAB. 2001, Prentice Hall Gonzalez RC, Woods RE, Eddins SL: Digital Image Processing using MATLAB. 2001, Prentice Hall
12.
go back to reference Chan TF, LA Vese: Active Contours Without Edges. IEEE Trans on Image Process. 2001, 10: 266-277. 10.1109/83.902291. Chan TF, LA Vese: Active Contours Without Edges. IEEE Trans on Image Process. 2001, 10: 266-277. 10.1109/83.902291.
13.
go back to reference Jampana PV: Computer Vision based Sensors for Chemical Process. PhD Thesis. 2010, University of Alberta, Dept. of Chemical and Materials Engineering Jampana PV: Computer Vision based Sensors for Chemical Process. PhD Thesis. 2010, University of Alberta, Dept. of Chemical and Materials Engineering
14.
go back to reference Iancu DA: Eye detection using variants of the Hough Transform:. Final project in CS475 Computational Vision and Biological perception. 2004 Iancu DA: Eye detection using variants of the Hough Transform:. Final project in CS475 Computational Vision and Biological perception. 2004
15.
go back to reference Johnson RA, Wichern DW: Applied Multivariate Statistical Analysis. 2009, Pearson education, 5 Johnson RA, Wichern DW: Applied Multivariate Statistical Analysis. 2009, Pearson education, 5
16.
go back to reference Oaks SCJ, Mitchell VS, Pearson GW, Carpenter CCJ: Malaria: Obstacles and opportunities. National Academy Press, Washington, DC. A report of the committee for the study on malaria prevention and control Status review and alternative strategies Oaks SCJ, Mitchell VS, Pearson GW, Carpenter CCJ: Malaria: Obstacles and opportunities. National Academy Press, Washington, DC. A report of the committee for the study on malaria prevention and control Status review and alternative strategies
Metadata
Title
Automated and unsupervised detection of malarial parasites in microscopic images
Authors
Yashasvi Purwar
Sirish L Shah
Gwen Clarke
Areej Almugairi
Atis Muehlenbachs
Publication date
01-12-2011
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2011
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/1475-2875-10-364

Other articles of this Issue 1/2011

Malaria Journal 1/2011 Go to the issue