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Published in: BMC Medical Genetics 1/2012

Open Access 01-12-2012 | Research article

SRY mutation analysis by next generation (deep) sequencing in a cohort of chromosomal Disorders of Sex Development (DSD) patients with a mosaic karyotype

Authors: Remko Hersmus, Hans Stoop, Erin Turbitt, J Wolter Oosterhuis, Stenvert LS Drop, Andrew H Sinclair, Stefan J White, Leendert HJ Looijenga

Published in: BMC Medical Genetics | Issue 1/2012

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Abstract

Background

The presence of the Y-chromosome or Y chromosome-derived material is seen in 4-60% of Turner syndrome patients (Chromosomal Disorders of Sex Development (DSD)). DSD patients with specific Y-chromosomal material in their karyotype, the GonadoBlastoma on the Y-chromosome (GBY) region, have an increased risk of developing type II germ cell tumors/cancer (GCC), most likely related to TSPY. The Sex determining Region on the Y gene (SRY) is located on the short arm of the Y-chromosome and is the crucial switch that initiates testis determination and subsequent male development. Mutations in this gene are responsible for sex reversal in approximately 10-15% of 46,XY pure gonadal dysgenesis (46,XY DSD) cases. The majority of the mutations described are located in the central HMG domain, which is involved in the binding and bending of the DNA and harbors two nuclear localization signals. SRY mutations have also been found in a small number of patients with a 45,X/46,XY karyotype and might play a role in the maldevelopment of the gonads.

Methods

To thoroughly investigate the presence of possible SRY gene mutations in mosaic DSD patients, we performed next generation (deep) sequencing on the genomic DNA of fourteen independent patients (twelve 45,X/46,XY, one 45,X/46,XX/46,XY, and one 46,XX/46,XY).

Results and conclusions

The results demonstrate that aberrations in SRY are rare in mosaic DSD patients and therefore do not play a significant role in the etiology of the disease.
Appendix
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Literature
1.
go back to reference Veitia RA, Salas-Cortes L, Ottolenghi C, Pailhoux E, Cotinot C, Fellous M: Testis determination in mammals: more questions than answers. Mol Cell Endocrinol. 2001, 179 (1–2): 3-16.CrossRefPubMed Veitia RA, Salas-Cortes L, Ottolenghi C, Pailhoux E, Cotinot C, Fellous M: Testis determination in mammals: more questions than answers. Mol Cell Endocrinol. 2001, 179 (1–2): 3-16.CrossRefPubMed
2.
go back to reference Wilhelm D, Palmer S, Koopman P: Sex determination and gonadal development in mammals. Physiol Rev. 2007, 87 (1): 1-28. 10.1152/physrev.00009.2006.CrossRefPubMed Wilhelm D, Palmer S, Koopman P: Sex determination and gonadal development in mammals. Physiol Rev. 2007, 87 (1): 1-28. 10.1152/physrev.00009.2006.CrossRefPubMed
3.
go back to reference Sekido R, Bar I, Narvaez V, Penny G, Lovell-Badge R: SOX9 is up-regulated by the transient expression of SRY specifically in Sertoli cell precursors. Dev Biol. 2004, 274 (2): 271-279. 10.1016/j.ydbio.2004.07.011.CrossRefPubMed Sekido R, Bar I, Narvaez V, Penny G, Lovell-Badge R: SOX9 is up-regulated by the transient expression of SRY specifically in Sertoli cell precursors. Dev Biol. 2004, 274 (2): 271-279. 10.1016/j.ydbio.2004.07.011.CrossRefPubMed
4.
go back to reference Wolff DJ, Van Dyke DL, Powell CM, Working Group of the ALQAC: Laboratory guideline for Turner syndrome. Genet Med. 2010, 12 (1): 52-55. 10.1097/GIM.0b013e3181c684b2.CrossRefPubMed Wolff DJ, Van Dyke DL, Powell CM, Working Group of the ALQAC: Laboratory guideline for Turner syndrome. Genet Med. 2010, 12 (1): 52-55. 10.1097/GIM.0b013e3181c684b2.CrossRefPubMed
5.
go back to reference Alvarez-Nava F, Gonzalez S, Soto S, Pineda L, Morales-Machin A: Mixed gonadal dysgenesis: a syndrome of broad clinical, cytogenetic and histopathologic spectrum. Genet Couns. 1999, 10 (3): 233-243.PubMed Alvarez-Nava F, Gonzalez S, Soto S, Pineda L, Morales-Machin A: Mixed gonadal dysgenesis: a syndrome of broad clinical, cytogenetic and histopathologic spectrum. Genet Couns. 1999, 10 (3): 233-243.PubMed
6.
go back to reference Cools M, Boter M, van Gurp R, Stoop H, Poddighe P, Lau YF, Drop SL, Wolffenbuttel KP, Looijenga LH: Impact of the Y-containing cell line on histological differentiation patterns in dysgenetic gonads. Clin Endocrinol (Oxf). 2007, 67 (2): 184-192. 10.1111/j.1365-2265.2007.02859.x.CrossRef Cools M, Boter M, van Gurp R, Stoop H, Poddighe P, Lau YF, Drop SL, Wolffenbuttel KP, Looijenga LH: Impact of the Y-containing cell line on histological differentiation patterns in dysgenetic gonads. Clin Endocrinol (Oxf). 2007, 67 (2): 184-192. 10.1111/j.1365-2265.2007.02859.x.CrossRef
7.
go back to reference Cools M, Pleskacova J, Stoop H, Hoebeke P, Van Laecke E, Drop SL, Lebl J, Oosterhuis JW, Looijenga LH, Wolffenbuttel KP, et al: Gonadal pathology and tumor risk in relation to clinical characteristics in patients with 45, X/46, XY mosaicism. J Clin Endocrinol Metab. 2011, 96 (7): E1171-1180. 10.1210/jc.2011-0232.CrossRefPubMed Cools M, Pleskacova J, Stoop H, Hoebeke P, Van Laecke E, Drop SL, Lebl J, Oosterhuis JW, Looijenga LH, Wolffenbuttel KP, et al: Gonadal pathology and tumor risk in relation to clinical characteristics in patients with 45, X/46, XY mosaicism. J Clin Endocrinol Metab. 2011, 96 (7): E1171-1180. 10.1210/jc.2011-0232.CrossRefPubMed
8.
go back to reference Lau YF, Li Y, Kido T: Gonadoblastoma locus and the TSPY gene on the human Y chromosome. Birth Defects Res C Embryo Today. 2009, 87 (1): 114-122. 10.1002/bdrc.20144.CrossRefPubMed Lau YF, Li Y, Kido T: Gonadoblastoma locus and the TSPY gene on the human Y chromosome. Birth Defects Res C Embryo Today. 2009, 87 (1): 114-122. 10.1002/bdrc.20144.CrossRefPubMed
9.
go back to reference Hersmus R, de Leeuw BH, Wolffenbuttel KP, Drop SL, Oosterhuis JW, Cools M, Looijenga LH: New insights into type II germ cell tumor pathogenesis based on studies of patients with various forms of disorders of sex development (DSD). Mol Cell Endocrinol. 2008, 291 (1–2): 1-10.CrossRefPubMed Hersmus R, de Leeuw BH, Wolffenbuttel KP, Drop SL, Oosterhuis JW, Cools M, Looijenga LH: New insights into type II germ cell tumor pathogenesis based on studies of patients with various forms of disorders of sex development (DSD). Mol Cell Endocrinol. 2008, 291 (1–2): 1-10.CrossRefPubMed
10.
go back to reference Cameron FJ, Sinclair AH: Mutations in SRY and SOX9: testis-determining genes. Hum Mutat. 1997, 9 (5): 388-395. 10.1002/(SICI)1098-1004(1997)9:5<388::AID-HUMU2>3.0.CO;2-0.CrossRefPubMed Cameron FJ, Sinclair AH: Mutations in SRY and SOX9: testis-determining genes. Hum Mutat. 1997, 9 (5): 388-395. 10.1002/(SICI)1098-1004(1997)9:5<388::AID-HUMU2>3.0.CO;2-0.CrossRefPubMed
11.
go back to reference Canto P, de la Chesnaye E, Lopez M, Cervantes A, Chavez B, Vilchis F, Reyes E, Ulloa-Aguirre A, Kofman-Alfaro S, Mendez JP: A mutation in the 5' non-high mobility group box region of the SRY gene in patients with Turner syndrome and Y mosaicism. J Clin Endocrinol Metab. 2000, 85 (5): 1908-1911. 10.1210/jc.85.5.1908.PubMed Canto P, de la Chesnaye E, Lopez M, Cervantes A, Chavez B, Vilchis F, Reyes E, Ulloa-Aguirre A, Kofman-Alfaro S, Mendez JP: A mutation in the 5' non-high mobility group box region of the SRY gene in patients with Turner syndrome and Y mosaicism. J Clin Endocrinol Metab. 2000, 85 (5): 1908-1911. 10.1210/jc.85.5.1908.PubMed
12.
go back to reference Shahid M, Dhillon VS, Aslam M, Husain SA: Three new novel point mutations localized within and downstream of high-mobility group-box region in SRY gene in three Indian females with Turner syndrome. J Clin Endocrinol Metab. 2005, 90 (4): 2429-2435. 10.1210/jc.2004-1110.CrossRefPubMed Shahid M, Dhillon VS, Aslam M, Husain SA: Three new novel point mutations localized within and downstream of high-mobility group-box region in SRY gene in three Indian females with Turner syndrome. J Clin Endocrinol Metab. 2005, 90 (4): 2429-2435. 10.1210/jc.2004-1110.CrossRefPubMed
13.
go back to reference Shahid M, Dhillon VS, Khalil HS, Haque S, Batra S, Husain SA, Looijenga LH: A SRY-HMG box frame shift mutation inherited from a mosaic father with a mild form of testicular dysgenesis syndrome in Turner syndrome patient. BMC Med Genet. 2010, 11: 131-10.1186/1471-2350-11-131.CrossRefPubMedPubMedCentral Shahid M, Dhillon VS, Khalil HS, Haque S, Batra S, Husain SA, Looijenga LH: A SRY-HMG box frame shift mutation inherited from a mosaic father with a mild form of testicular dysgenesis syndrome in Turner syndrome patient. BMC Med Genet. 2010, 11: 131-10.1186/1471-2350-11-131.CrossRefPubMedPubMedCentral
14.
go back to reference Nishi MY, Costa EM, Oliveira SB, Mendonca BB, Domenice S: The role of SRY mutations in the etiology of gonadal dysgenesis in patients with 45, X/46, XY disorder of sex development and variants. Horm Res Paediatr. 2011, 75 (1): 26-31. 10.1159/000316536.CrossRefPubMed Nishi MY, Costa EM, Oliveira SB, Mendonca BB, Domenice S: The role of SRY mutations in the etiology of gonadal dysgenesis in patients with 45, X/46, XY disorder of sex development and variants. Horm Res Paediatr. 2011, 75 (1): 26-31. 10.1159/000316536.CrossRefPubMed
15.
go back to reference Qin W, Kozlowski P, Taillon BE, Bouffard P, Holmes AJ, Janne P, Camposano S, Thiele E, Franz D, Kwiatkowski DJ: Ultra deep sequencing detects a low rate of mosaic mutations in tuberous sclerosis complex. Hum Genet. 2010, 127 (5): 573-582. 10.1007/s00439-010-0801-z.CrossRefPubMedPubMedCentral Qin W, Kozlowski P, Taillon BE, Bouffard P, Holmes AJ, Janne P, Camposano S, Thiele E, Franz D, Kwiatkowski DJ: Ultra deep sequencing detects a low rate of mosaic mutations in tuberous sclerosis complex. Hum Genet. 2010, 127 (5): 573-582. 10.1007/s00439-010-0801-z.CrossRefPubMedPubMedCentral
16.
go back to reference Rodriguez-Nieto S, Canada A, Pros E, Pinto AI, Torres-Lanzas J, Lopez-Rios F, Sanchez-Verde L, Pisano DG, Sanchez-Cespedes M: Massive parallel DNA pyrosequencing analysis of the tumor suppressor BRG1/SMARCA4 in lung primary tumors. Hum Mutat. 2011, 32 (2): E1999-2017. 10.1002/humu.21415.CrossRefPubMed Rodriguez-Nieto S, Canada A, Pros E, Pinto AI, Torres-Lanzas J, Lopez-Rios F, Sanchez-Verde L, Pisano DG, Sanchez-Cespedes M: Massive parallel DNA pyrosequencing analysis of the tumor suppressor BRG1/SMARCA4 in lung primary tumors. Hum Mutat. 2011, 32 (2): E1999-2017. 10.1002/humu.21415.CrossRefPubMed
17.
go back to reference Gilles A, Meglecz E, Pech N, Ferreira S, Malausa T, Martin J-F: Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing. BMC Genomics. 2011, 12 (1): 245-10.1186/1471-2164-12-245.CrossRefPubMedPubMedCentral Gilles A, Meglecz E, Pech N, Ferreira S, Malausa T, Martin J-F: Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing. BMC Genomics. 2011, 12 (1): 245-10.1186/1471-2164-12-245.CrossRefPubMedPubMedCentral
18.
go back to reference Sinclair AH, Berta P, Palmer MS, Hawkins JR, Griffiths BL, Smith MJ, Foster JW, Frischauf AM, Lovell-Badge R, Goodfellow PN: A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif. Nature. 1990, 346 (6281): 240-244. 10.1038/346240a0.CrossRefPubMed Sinclair AH, Berta P, Palmer MS, Hawkins JR, Griffiths BL, Smith MJ, Foster JW, Frischauf AM, Lovell-Badge R, Goodfellow PN: A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif. Nature. 1990, 346 (6281): 240-244. 10.1038/346240a0.CrossRefPubMed
19.
go back to reference Page DC: Hypothesis: a Y-chromosomal gene causes gonadoblastoma in dysgenetic gonads. Development. 1987, 101 (Suppl): 151-155.PubMed Page DC: Hypothesis: a Y-chromosomal gene causes gonadoblastoma in dysgenetic gonads. Development. 1987, 101 (Suppl): 151-155.PubMed
20.
go back to reference Looijenga LH, Hersmus R, Oosterhuis JW, Cools M, Drop SL, Wolffenbuttel KP: Tumor risk in disorders of sex development (DSD). Best Pract Res Clin Endocrinol Metab. 2007, 21 (3): 480-495. 10.1016/j.beem.2007.05.001.CrossRefPubMed Looijenga LH, Hersmus R, Oosterhuis JW, Cools M, Drop SL, Wolffenbuttel KP: Tumor risk in disorders of sex development (DSD). Best Pract Res Clin Endocrinol Metab. 2007, 21 (3): 480-495. 10.1016/j.beem.2007.05.001.CrossRefPubMed
21.
go back to reference Fernandez R, Marchal JA, Sanchez A, Pasaro E: A point mutation, R59G, within the HMG-SRY box in a female 45, X/46, X, psu dic(Y)(pter– > q11::q11– > pter). Hum Genet. 2002, 111 (3): 242-246. 10.1007/s00439-002-0767-6.CrossRefPubMed Fernandez R, Marchal JA, Sanchez A, Pasaro E: A point mutation, R59G, within the HMG-SRY box in a female 45, X/46, X, psu dic(Y)(pter– > q11::q11– > pter). Hum Genet. 2002, 111 (3): 242-246. 10.1007/s00439-002-0767-6.CrossRefPubMed
22.
go back to reference Domenice S, Yumie Nishi M, Correia Billerbeck AE, Latronico AC, Aparecida Medeiros M, Russell AJ, Vass K, Marino Carvalho F, Costa Frade EM, Prado Arnhold IJ, et al: A novel missense mutation (S18N) in the 5' non-HMG box region of the SRY gene in a patient with partial gonadal dysgenesis and his normal male relatives. Hum Genet. 1998, 102 (2): 213-215. 10.1007/s004390050680.CrossRefPubMed Domenice S, Yumie Nishi M, Correia Billerbeck AE, Latronico AC, Aparecida Medeiros M, Russell AJ, Vass K, Marino Carvalho F, Costa Frade EM, Prado Arnhold IJ, et al: A novel missense mutation (S18N) in the 5' non-HMG box region of the SRY gene in a patient with partial gonadal dysgenesis and his normal male relatives. Hum Genet. 1998, 102 (2): 213-215. 10.1007/s004390050680.CrossRefPubMed
23.
go back to reference Takagi A, Imai A, Tamaya T: A novel sex-determining region on Y (SRY) nonsense mutation identified in a 45, X/47, XYY female. Fertil Steril. 1999, 72 (1): 167-169. 10.1016/S0015-0282(99)00168-5.CrossRefPubMed Takagi A, Imai A, Tamaya T: A novel sex-determining region on Y (SRY) nonsense mutation identified in a 45, X/47, XYY female. Fertil Steril. 1999, 72 (1): 167-169. 10.1016/S0015-0282(99)00168-5.CrossRefPubMed
24.
go back to reference Skakkebaek NE: Testicular dysgenesis syndrome. Horm Res. 2003, 60 Suppl 3: 49-PubMed Skakkebaek NE: Testicular dysgenesis syndrome. Horm Res. 2003, 60 Suppl 3: 49-PubMed
25.
go back to reference Isidor B, Capito C, Paris F, Baron S, Corradini N, Cabaret B, Leclair MD, Giraud M, Martin-Coignard D, David A, et al: Familial frameshift SRY mutation inherited from a mosaic father with testicular dysgenesis syndrome. J Clin Endocrinol Metab. 2009, 94 (9): 3467-3471. 10.1210/jc.2009-0226.CrossRefPubMed Isidor B, Capito C, Paris F, Baron S, Corradini N, Cabaret B, Leclair MD, Giraud M, Martin-Coignard D, David A, et al: Familial frameshift SRY mutation inherited from a mosaic father with testicular dysgenesis syndrome. J Clin Endocrinol Metab. 2009, 94 (9): 3467-3471. 10.1210/jc.2009-0226.CrossRefPubMed
26.
go back to reference Palmer SJ, Burgoyne PS: In situ analysis of fetal, prepuberal and adult XX––XY chimaeric mouse testes: Sertoli cells are predominantly, but not exclusively, XY. Development. 1991, 112 (1): 265-268.PubMed Palmer SJ, Burgoyne PS: In situ analysis of fetal, prepuberal and adult XX––XY chimaeric mouse testes: Sertoli cells are predominantly, but not exclusively, XY. Development. 1991, 112 (1): 265-268.PubMed
27.
go back to reference Reddy KS, Sulcova V, Ho CK, Conner ED, Khurana A: An infant with a mosaic 45,X/46,X,psu dic(Y) (pter-- > q11.2::q11.2-- > pter) karyotype and mixed gonadal dysgenesis studied for extent of mosaicism in the gonads. Am J Med Genet. 1996, 66 (4): 441-444. 10.1002/(SICI)1096-8628(19961230)66:4<441::AID-AJMG11>3.0.CO;2-U.CrossRefPubMed Reddy KS, Sulcova V, Ho CK, Conner ED, Khurana A: An infant with a mosaic 45,X/46,X,psu dic(Y) (pter-- > q11.2::q11.2-- > pter) karyotype and mixed gonadal dysgenesis studied for extent of mosaicism in the gonads. Am J Med Genet. 1996, 66 (4): 441-444. 10.1002/(SICI)1096-8628(19961230)66:4<441::AID-AJMG11>3.0.CO;2-U.CrossRefPubMed
28.
go back to reference Reddy KS, Sulcova V: Pathogenetics of 45, X/46, XY gonadal mosaicism. Cytogenet Cell Genet. 1998, 82 (1–2): 52-57.CrossRefPubMed Reddy KS, Sulcova V: Pathogenetics of 45, X/46, XY gonadal mosaicism. Cytogenet Cell Genet. 1998, 82 (1–2): 52-57.CrossRefPubMed
29.
go back to reference Petrusevska R, Beudt U, Schafer D, Schneider M, Brude E, Leitner C, Heller K, Arnemann J: Distribution of marker-Y chromosome containing cells in different tissues of a Turner mosaic patient with mixed gonadal dysgenesis. Clin Genet. 1996, 49 (5): 261-266.CrossRefPubMed Petrusevska R, Beudt U, Schafer D, Schneider M, Brude E, Leitner C, Heller K, Arnemann J: Distribution of marker-Y chromosome containing cells in different tissues of a Turner mosaic patient with mixed gonadal dysgenesis. Clin Genet. 1996, 49 (5): 261-266.CrossRefPubMed
30.
go back to reference Queipo G, Zenteno JC, Pena R, Nieto K, Radillo A, Dorantes LM, Erana L, Lieberman E, Soderlund D, Jimenez AL, et al: Molecular analysis in true hermaphroditism: demonstration of low-level hidden mosaicism for Y-derived sequences in 46, XX cases. Hum Genet. 2002, 111 (3): 278-283. 10.1007/s00439-002-0772-9.CrossRefPubMed Queipo G, Zenteno JC, Pena R, Nieto K, Radillo A, Dorantes LM, Erana L, Lieberman E, Soderlund D, Jimenez AL, et al: Molecular analysis in true hermaphroditism: demonstration of low-level hidden mosaicism for Y-derived sequences in 46, XX cases. Hum Genet. 2002, 111 (3): 278-283. 10.1007/s00439-002-0772-9.CrossRefPubMed
31.
go back to reference Woodward PJ, Heidenreich A, Looijenga LHJ, et al: Testicular germ cell tumors. World Health Organization Classification of Tumours Pathology and Genetics of the Urinary System and Male Genital Organs. Edited by: Eble JN, Sauter G, Epstein JI, Sesterhann IA. 2004, Lyon: IARC Press, 217-278. Woodward PJ, Heidenreich A, Looijenga LHJ, et al: Testicular germ cell tumors. World Health Organization Classification of Tumours Pathology and Genetics of the Urinary System and Male Genital Organs. Edited by: Eble JN, Sauter G, Epstein JI, Sesterhann IA. 2004, Lyon: IARC Press, 217-278.
Metadata
Title
SRY mutation analysis by next generation (deep) sequencing in a cohort of chromosomal Disorders of Sex Development (DSD) patients with a mosaic karyotype
Authors
Remko Hersmus
Hans Stoop
Erin Turbitt
J Wolter Oosterhuis
Stenvert LS Drop
Andrew H Sinclair
Stefan J White
Leendert HJ Looijenga
Publication date
01-12-2012
Publisher
BioMed Central
Published in
BMC Medical Genetics / Issue 1/2012
Electronic ISSN: 1471-2350
DOI
https://doi.org/10.1186/1471-2350-13-108

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