Skip to main content
Top
Published in: Journal of Cardiovascular Magnetic Resonance 1/2012

Open Access 01-12-2012 | Research

Semi-automatic segmentation of myocardium at risk in T2-weighted cardiovascular magnetic resonance

Authors: Jane Sjögren, Joey FA Ubachs, Henrik Engblom, Marcus Carlsson, Håkan Arheden, Einar Heiberg

Published in: Journal of Cardiovascular Magnetic Resonance | Issue 1/2012

Login to get access

Abstract

Background

T2-weighted cardiovascular magnetic resonance (CMR) has been shown to be a promising technique for determination of ischemic myocardium, referred to as myocardium at risk (MaR), after an acute coronary event. Quantification of MaR in T2-weighted CMR has been proposed to be performed by manual delineation or the threshold methods of two standard deviations from remote (2SD), full width half maximum intensity (FWHM) or Otsu. However, manual delineation is subjective and threshold methods have inherent limitations related to threshold definition and lack of a priori information about cardiac anatomy and physiology. Therefore, the aim of this study was to develop an automatic segmentation algorithm for quantification of MaR using anatomical a priori information.

Methods

Forty-seven patients with first-time acute ST-elevation myocardial infarction underwent T2-weighted CMR within 1 week after admission. Endocardial and epicardial borders of the left ventricle, as well as the hyper enhanced MaR regions were manually delineated by experienced observers and used as reference method. A new automatic segmentation algorithm, called Segment MaR, defines the MaR region as the continuous region most probable of being MaR, by estimating the intensities of normal myocardium and MaR with an expectation maximization algorithm and restricting the MaR region by an a priori model of the maximal extent for the user defined culprit artery. The segmentation by Segment MaR was compared against inter observer variability of manual delineation and the threshold methods of 2SD, FWHM and Otsu.

Results

MaR was 32.9 ± 10.9% of left ventricular mass (LVM) when assessed by the reference observer and 31.0 ± 8.8% of LVM assessed by Segment MaR. The bias and correlation was, -1.9 ± 6.4% of LVM, R = 0.81 (p < 0.001) for Segment MaR, -2.3 ± 4.9%, R = 0.91 (p < 0.001) for inter observer variability of manual delineation, -7.7 ± 11.4%, R = 0.38 (p = 0.008) for 2SD, -21.0 ± 9.9%, R = 0.41 (p = 0.004) for FWHM, and 5.3 ± 9.6%, R = 0.47 (p < 0.001) for Otsu.

Conclusions

There is a good agreement between automatic Segment MaR and manually assessed MaR in T2-weighted CMR. Thus, the proposed algorithm seems to be a promising, objective method for standardized MaR quantification in T2-weighted CMR.
Appendix
Available only for authorised users
Literature
1.
go back to reference Aletras AH, Tilak GS, Natanzon A, Hsu LY, Gonzalez FM, Hoyt RF, Arai AE: Retrospective determination of the area at risk for reperfused acute myocardial infarction with T2-weighted cardiac magnetic resonance imaging: histopathological and displacement encoding with stimulated echoes (DENSE) functional validations. Circulation. 2006, 113: 1865-1870.CrossRefPubMed Aletras AH, Tilak GS, Natanzon A, Hsu LY, Gonzalez FM, Hoyt RF, Arai AE: Retrospective determination of the area at risk for reperfused acute myocardial infarction with T2-weighted cardiac magnetic resonance imaging: histopathological and displacement encoding with stimulated echoes (DENSE) functional validations. Circulation. 2006, 113: 1865-1870.CrossRefPubMed
2.
go back to reference Fishbein MC, Maclean D, Maroko PR: The histopathologic evolution of myocardial infarction. Chest. 1978, 73: 843-849.CrossRefPubMed Fishbein MC, Maclean D, Maroko PR: The histopathologic evolution of myocardial infarction. Chest. 1978, 73: 843-849.CrossRefPubMed
3.
go back to reference Jennings RB, Schaper J, Hill ML, Steenbergen C, Reimer KA: Effect of reperfusion late in the phase of reversible ischemic injury. Changes in cell volume, electrolytes, metabolites, and ultrastructure. Circ Res. 1985, 56: 262-278.CrossRefPubMed Jennings RB, Schaper J, Hill ML, Steenbergen C, Reimer KA: Effect of reperfusion late in the phase of reversible ischemic injury. Changes in cell volume, electrolytes, metabolites, and ultrastructure. Circ Res. 1985, 56: 262-278.CrossRefPubMed
4.
go back to reference Carlsson M, Ubachs JF, Hedstrom E, Heiberg E, Jovinge S, Arheden H: Myocardium at risk after acute infarction in humans on cardiac magnetic resonance: quantitative assessment during follow-up and validation with single-photon emission computed tomography. JACC Cardiovasc Imaging. 2009, 2: 569-576.CrossRefPubMed Carlsson M, Ubachs JF, Hedstrom E, Heiberg E, Jovinge S, Arheden H: Myocardium at risk after acute infarction in humans on cardiac magnetic resonance: quantitative assessment during follow-up and validation with single-photon emission computed tomography. JACC Cardiovasc Imaging. 2009, 2: 569-576.CrossRefPubMed
5.
go back to reference Friedrich MG, Abdel-Aty H, Taylor A, Schulz-Menger J, Messroghli D, Dietz R: The salvaged area at risk in reperfused acute myocardial infarction as visualized by cardiovascular magnetic resonance. J Am Coll Cardiol. 2008, 51: 1581-1587.CrossRefPubMed Friedrich MG, Abdel-Aty H, Taylor A, Schulz-Menger J, Messroghli D, Dietz R: The salvaged area at risk in reperfused acute myocardial infarction as visualized by cardiovascular magnetic resonance. J Am Coll Cardiol. 2008, 51: 1581-1587.CrossRefPubMed
6.
go back to reference Stork A, Muellerleile K, Bansmann PM, Graessner J, Kaul M, Kemper J, Adam G, Lund GK: Value of T2-weighted, first-pass and delayed enhancement, and cine CMR to differentiate between acute and chronic myocardial infarction. Eur Radiol. 2007, 17: 610-617.CrossRefPubMed Stork A, Muellerleile K, Bansmann PM, Graessner J, Kaul M, Kemper J, Adam G, Lund GK: Value of T2-weighted, first-pass and delayed enhancement, and cine CMR to differentiate between acute and chronic myocardial infarction. Eur Radiol. 2007, 17: 610-617.CrossRefPubMed
7.
go back to reference Abdel-Aty H, Zagrosek A, Schulz-Menger J, Taylor AJ, Messroghli D, Kumar A, Gross M, Dietz R, Friedrich MG: Delayed enhancement and T2-weighted cardiovascular magnetic resonance imaging differentiate acute from chronic myocardial infarction. Circulation. 2004, 109: 2411-2416.CrossRefPubMed Abdel-Aty H, Zagrosek A, Schulz-Menger J, Taylor AJ, Messroghli D, Kumar A, Gross M, Dietz R, Friedrich MG: Delayed enhancement and T2-weighted cardiovascular magnetic resonance imaging differentiate acute from chronic myocardial infarction. Circulation. 2004, 109: 2411-2416.CrossRefPubMed
8.
go back to reference Wright J, Adriaenssens T, Dymarkowski S, Desmet W, Bogaert J: Quantification of myocardial area at risk with T2-weighted CMR: comparison with contrast-enhanced CMR and coronary angiography. JACC Cardiovasc Imaging. 2009, 2: 825-831.CrossRefPubMed Wright J, Adriaenssens T, Dymarkowski S, Desmet W, Bogaert J: Quantification of myocardial area at risk with T2-weighted CMR: comparison with contrast-enhanced CMR and coronary angiography. JACC Cardiovasc Imaging. 2009, 2: 825-831.CrossRefPubMed
9.
go back to reference Tilak GS, Hsu LY, Hoyt RF, Arai AE, Aletras AH: In vivo T2-weighted magnetic resonance imaging can accurately determine the ischemic area at risk for 2-day-old nonreperfused myocardial infarction. Invest Radiol. 2008, 43: 7-15.CrossRefPubMed Tilak GS, Hsu LY, Hoyt RF, Arai AE, Aletras AH: In vivo T2-weighted magnetic resonance imaging can accurately determine the ischemic area at risk for 2-day-old nonreperfused myocardial infarction. Invest Radiol. 2008, 43: 7-15.CrossRefPubMed
10.
go back to reference Burchell T, Flett A, Petersen S, Davies L, Mohiddin S, Mathur A, Westwood M: Comparing analysis methods for quantification of myocardial oedema in patients following reperfused ST-elevation MI. Journal of Cardiovascular Magnetic Resonance. 2011, 13: M11-PubMedCentralCrossRef Burchell T, Flett A, Petersen S, Davies L, Mohiddin S, Mathur A, Westwood M: Comparing analysis methods for quantification of myocardial oedema in patients following reperfused ST-elevation MI. Journal of Cardiovascular Magnetic Resonance. 2011, 13: M11-PubMedCentralCrossRef
11.
go back to reference Johnstone RI, Greenwood JP, Biglands JD, Plein S, Ridgway JP, Radjenovic A: Assessment of tissue edema in patients with acute myocardial infarction by computer-assisted quantification of triple inversion recovery prepared MRI of the myocardium. Magn Reson Med. 2011 Johnstone RI, Greenwood JP, Biglands JD, Plein S, Ridgway JP, Radjenovic A: Assessment of tissue edema in patients with acute myocardial infarction by computer-assisted quantification of triple inversion recovery prepared MRI of the myocardium. Magn Reson Med. 2011
12.
go back to reference Beek AM, Nijveldt R, van Rossum AC: Intramyocardial hemorrhage and microvascular obstruction after primary percutaneous coronary intervention. Int J Cardiovasc Imaging. 2010, 26: 49-55.PubMedCentralCrossRefPubMed Beek AM, Nijveldt R, van Rossum AC: Intramyocardial hemorrhage and microvascular obstruction after primary percutaneous coronary intervention. Int J Cardiovasc Imaging. 2010, 26: 49-55.PubMedCentralCrossRefPubMed
13.
go back to reference Heiberg E, Sjogren J, Ugander M, Carlsson M, Engblom H, Arheden H: Design and validation of Segment--freely available software for cardiovascular image analysis. BMC Med Imaging. 2010, 10: 1-PubMedCentralCrossRefPubMed Heiberg E, Sjogren J, Ugander M, Carlsson M, Engblom H, Arheden H: Design and validation of Segment--freely available software for cardiovascular image analysis. BMC Med Imaging. 2010, 10: 1-PubMedCentralCrossRefPubMed
14.
go back to reference Cerqueira MD, Weissman NJ, Dilsizian V, Jacobs AK, Kaul S, Laskey WK, Pennell DJ, Rumberger JA, Ryan T, Verani MS: Standardized myocardial segmentation and nomenclature for tomographic imaging of the heart: a statement for healthcare professionals from the Cardiac Imaging Committee of the Council on Clinical Cardiology of the American Heart Association. Circulation. 2002, 105: 539-542.CrossRefPubMed Cerqueira MD, Weissman NJ, Dilsizian V, Jacobs AK, Kaul S, Laskey WK, Pennell DJ, Rumberger JA, Ryan T, Verani MS: Standardized myocardial segmentation and nomenclature for tomographic imaging of the heart: a statement for healthcare professionals from the Cardiac Imaging Committee of the Council on Clinical Cardiology of the American Heart Association. Circulation. 2002, 105: 539-542.CrossRefPubMed
15.
go back to reference Dempster AP, Laird NM, Rubin DB: Maximum Likelihood from Incomplete Data Via Em Algorithm. J Roy Stat Soc B Met. 1977, 39: 1-38. Dempster AP, Laird NM, Rubin DB: Maximum Likelihood from Incomplete Data Via Em Algorithm. J Roy Stat Soc B Met. 1977, 39: 1-38.
16.
go back to reference Granlund G, Knutsson H: Signal processing for computer vision. 1995, Linkoping: Kluwer Academic PublishersCrossRef Granlund G, Knutsson H: Signal processing for computer vision. 1995, Linkoping: Kluwer Academic PublishersCrossRef
17.
go back to reference Hsu LY, Natanzon A, Kellman P, Hirsch GA, Aletras AH, Arai AE: Quantitative myocardial infarction on delayed enhancement MRI. Part I: Animal validation of an automated feature analysis and combined thresholding infarct sizing algorithm. J Magn Reson Imaging. 2006, 23: 298-308.CrossRefPubMed Hsu LY, Natanzon A, Kellman P, Hirsch GA, Aletras AH, Arai AE: Quantitative myocardial infarction on delayed enhancement MRI. Part I: Animal validation of an automated feature analysis and combined thresholding infarct sizing algorithm. J Magn Reson Imaging. 2006, 23: 298-308.CrossRefPubMed
18.
go back to reference Otsu N: Threshold Selection Method from Gray-Level Histograms. Ieee T Syst Man Cyb. 1979, 9: 62-66.CrossRef Otsu N: Threshold Selection Method from Gray-Level Histograms. Ieee T Syst Man Cyb. 1979, 9: 62-66.CrossRef
19.
go back to reference Dice LR: Measures of the Amount of Ecologic Association between Species. Ecology. 1945, 26: 297-302.CrossRef Dice LR: Measures of the Amount of Ecologic Association between Species. Ecology. 1945, 26: 297-302.CrossRef
20.
go back to reference Zijdenbos AP, Dawant BM, Margolin RA, Palmer AC: Morphometric Analysis of White-Matter Lesions in Mr-Images-Method and Validation. Ieee T Med Imaging. 1994, 13: 716-724.CrossRef Zijdenbos AP, Dawant BM, Margolin RA, Palmer AC: Morphometric Analysis of White-Matter Lesions in Mr-Images-Method and Validation. Ieee T Med Imaging. 1994, 13: 716-724.CrossRef
21.
go back to reference Abdel-Aty H, Simonetti O, Friedrich MG: T2-weighted cardiovascular magnetic resonance imaging. J Magn Reson Imaging. 2007, 26: 452-459.CrossRefPubMed Abdel-Aty H, Simonetti O, Friedrich MG: T2-weighted cardiovascular magnetic resonance imaging. J Magn Reson Imaging. 2007, 26: 452-459.CrossRefPubMed
Metadata
Title
Semi-automatic segmentation of myocardium at risk in T2-weighted cardiovascular magnetic resonance
Authors
Jane Sjögren
Joey FA Ubachs
Henrik Engblom
Marcus Carlsson
Håkan Arheden
Einar Heiberg
Publication date
01-12-2012
Publisher
BioMed Central
Published in
Journal of Cardiovascular Magnetic Resonance / Issue 1/2012
Electronic ISSN: 1532-429X
DOI
https://doi.org/10.1186/1532-429X-14-10

Other articles of this Issue 1/2012

Journal of Cardiovascular Magnetic Resonance 1/2012 Go to the issue