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Published in: BMC Infectious Diseases 1/2004

Open Access 01-12-2004 | Research article

Nucleic acid amplification tests in the diagnosis of tuberculous pleuritis: a systematic review and meta-analysis

Authors: Madhukar Pai, Laura L Flores, Alan Hubbard, Lee W Riley, John M Colford Jr

Published in: BMC Infectious Diseases | Issue 1/2004

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Abstract

Background

Conventional tests for tuberculous pleuritis have several limitations. A variety of new, rapid tests such as nucleic acid amplification tests – including polymerase chain reaction – have been evaluated in recent times. We conducted a systematic review to determine the accuracy of nucleic acid amplification (NAA) tests in the diagnosis of tuberculous pleuritis.

Methods

A systematic review and meta-analysis of 38 English and Spanish articles (with 40 studies), identified via searches of six electronic databases, hand searching of selected journals, and contact with authors, experts, and test manufacturers. Sensitivity, specificity, and other measures of accuracy were pooled using random effects models. Summary receiver operating characteristic curves were used to summarize overall test performance. Heterogeneity in study results was formally explored using subgroup analyses.

Results

Of the 40 studies included, 26 used in-house ("home-brew") tests, and 14 used commercial tests. Commercial tests had a low overall sensitivity (0.62; 95% confidence interval [CI] 0.43, 0.77), and high specificity (0.98; 95% CI 0.96, 0.98). The positive and negative likelihood ratios for commercial tests were 25.4 (95% CI 16.2, 40.0) and 0.40 (95% CI 0.24, 0.67), respectively. All commercial tests had consistently high specificity estimates; the sensitivity estimates, however, were heterogeneous across studies. With the in-house tests, both sensitivity and specificity estimates were significantly heterogeneous. Clinically meaningful summary estimates could not be determined for in-house tests.

Conclusions

Our results suggest that commercial NAA tests may have a potential role in confirming (ruling in) tuberculous pleuritis. However, these tests have low and variable sensitivity and, therefore, may not be useful in excluding (ruling out) the disease. NAA test results, therefore, cannot replace conventional tests; they need to be interpreted in parallel with clinical findings and results of conventional tests. The accuracy of in-house nucleic acid amplification tests is poorly defined because of heterogeneity in study results. The clinical applicability of in-house NAA tests remains unclear.
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Literature
1.
go back to reference Markowitz N, Hansen NI, Hopewell PC, Glassroth J, Kvale PA, Mangura BT, Wilcosky TC, Wallace JM, Rosen MJ, Reichman LB: Incidence of tuberculosis in the United States among HIV-infected persons. The Pulmonary Complications of HIV Infection Study Group. Ann Intern Med. 1997, 126: 123-132.CrossRefPubMed Markowitz N, Hansen NI, Hopewell PC, Glassroth J, Kvale PA, Mangura BT, Wilcosky TC, Wallace JM, Rosen MJ, Reichman LB: Incidence of tuberculosis in the United States among HIV-infected persons. The Pulmonary Complications of HIV Infection Study Group. Ann Intern Med. 1997, 126: 123-132.CrossRefPubMed
3.
go back to reference Rose AMC, Watson JM, Graham C, Nunn AJ, Drobniewski F, Ormerod LP, Darbyshire JH, Leese J: Tuberculosis at the end of the 20th century in England and Wales: results of a national survey in 1998. Thorax. 2001, 56: 173-179. 10.1136/thorax.56.3.173.CrossRefPubMedPubMedCentral Rose AMC, Watson JM, Graham C, Nunn AJ, Drobniewski F, Ormerod LP, Darbyshire JH, Leese J: Tuberculosis at the end of the 20th century in England and Wales: results of a national survey in 1998. Thorax. 2001, 56: 173-179. 10.1136/thorax.56.3.173.CrossRefPubMedPubMedCentral
4.
go back to reference Light RW: Pleural Diseases. 2001, Philadelphia: Lippincott Williams & Wilkins Light RW: Pleural Diseases. 2001, Philadelphia: Lippincott Williams & Wilkins
5.
go back to reference Valdes L, Alvarez D, Valle JM, Pose A, San Jose E: The etiology of pleural effusions in an area with high incidence of tuberculosis. Chest. 1996, 109: 158-162.CrossRefPubMed Valdes L, Alvarez D, Valle JM, Pose A, San Jose E: The etiology of pleural effusions in an area with high incidence of tuberculosis. Chest. 1996, 109: 158-162.CrossRefPubMed
6.
go back to reference Liam CK, Lim KH, Wong CM: Causes of pleural exudates in a region with a high incidence of tuberculosis. Respirology. 2000, 5: 33-38. 10.1046/j.1440-1843.2000.00223.x.CrossRefPubMed Liam CK, Lim KH, Wong CM: Causes of pleural exudates in a region with a high incidence of tuberculosis. Respirology. 2000, 5: 33-38. 10.1046/j.1440-1843.2000.00223.x.CrossRefPubMed
7.
go back to reference al-Quorain A, Larbi EB, al-Muhanna F, Satti MB, Baloush A, Falha K: Pattern of pleural effusion in Eastern Province of Saudi Arabia: a prospective study. East Afr Med J. 1994, 71: 246-249. al-Quorain A, Larbi EB, al-Muhanna F, Satti MB, Baloush A, Falha K: Pattern of pleural effusion in Eastern Province of Saudi Arabia: a prospective study. East Afr Med J. 1994, 71: 246-249.
8.
go back to reference Mehta JB, Dutt A, Harvill L, Mathews KM: Epidemiology of extrapulmonary tuberculosis. A comparative analysis with pre-AIDS era. Chest. 1991, 99 (5): 1134-8.CrossRefPubMed Mehta JB, Dutt A, Harvill L, Mathews KM: Epidemiology of extrapulmonary tuberculosis. A comparative analysis with pre-AIDS era. Chest. 1991, 99 (5): 1134-8.CrossRefPubMed
9.
go back to reference Frye MD, Pozsik CJ, Sahn SA: Tuberculous pleurisy is more common in AIDS than in non-AIDS patients with tuberculosis. Chest. 1997, 112: 393-397.CrossRefPubMed Frye MD, Pozsik CJ, Sahn SA: Tuberculous pleurisy is more common in AIDS than in non-AIDS patients with tuberculosis. Chest. 1997, 112: 393-397.CrossRefPubMed
10.
go back to reference Bueno EC, Clemente GM, Castro CB, Martin ML, Ramos RS, Panizo GA, Glez-Rio MJ: Cytologic and bacteriologic analysis of fluid and pleural biopsy specimens with Cope's needle. Study of 414 patients. Arch Intern Med. 1990, 150: 1190-1194. 10.1001/archinte.150.6.1190.CrossRef Bueno EC, Clemente GM, Castro CB, Martin ML, Ramos RS, Panizo GA, Glez-Rio MJ: Cytologic and bacteriologic analysis of fluid and pleural biopsy specimens with Cope's needle. Study of 414 patients. Arch Intern Med. 1990, 150: 1190-1194. 10.1001/archinte.150.6.1190.CrossRef
12.
go back to reference Valdes L, Alvarez D, Jose SE, Penela P, Valle JM, Garcia-Pazos JM, Suarez J, Pose A: Tuberculous pleurisy: a study of 254 patients. Arch Intern Med. 1998, 158: 2017-2021. 10.1001/archinte.158.18.2017.CrossRefPubMed Valdes L, Alvarez D, Jose SE, Penela P, Valle JM, Garcia-Pazos JM, Suarez J, Pose A: Tuberculous pleurisy: a study of 254 patients. Arch Intern Med. 1998, 158: 2017-2021. 10.1001/archinte.158.18.2017.CrossRefPubMed
13.
go back to reference Seibert AF, Haynes J, Middleton R, Bass JB: Tuberculous pleural effusion: twenty-year experience. Chest. 1991, 99: 883-886.CrossRefPubMed Seibert AF, Haynes J, Middleton R, Bass JB: Tuberculous pleural effusion: twenty-year experience. Chest. 1991, 99: 883-886.CrossRefPubMed
14.
go back to reference Perez-Rodriguez E, Castro DJ: The use of adenosine deaminase and adenosine deaminase isoenzymes in the diagnosis of tuberculous pleuritis. Curr Opin Pulm Med. 2000, 6: 259-266. 10.1097/00063198-200007000-00002.CrossRefPubMed Perez-Rodriguez E, Castro DJ: The use of adenosine deaminase and adenosine deaminase isoenzymes in the diagnosis of tuberculous pleuritis. Curr Opin Pulm Med. 2000, 6: 259-266. 10.1097/00063198-200007000-00002.CrossRefPubMed
15.
go back to reference American Thoracic Society: American Thoracic Society Workshop. Rapid diagnostic tests for tuberculosis. What is the appropriate use?. Am J Respir Crit Care Med. 1997, 155: 1804-1814.CrossRef American Thoracic Society: American Thoracic Society Workshop. Rapid diagnostic tests for tuberculosis. What is the appropriate use?. Am J Respir Crit Care Med. 1997, 155: 1804-1814.CrossRef
16.
go back to reference Centers for Disease Control and Prevention: Update: Nucleic acid amplification tests for tuberculosis. MMWR Morb Mortal Wkly Rep. 2000, 49: 593-594. Centers for Disease Control and Prevention: Update: Nucleic acid amplification tests for tuberculosis. MMWR Morb Mortal Wkly Rep. 2000, 49: 593-594.
17.
go back to reference Deville WL, Buntinx F, Bouter LM, Montori VM, de Vet HC, van der Windt DA, Bezemer PD: Conducting systematic reviews of diagnostic studies: didactic guidelines. BMC Med Res Methodol. 2002, 2 (1): 9-10.1186/1471-2288-2-9.CrossRefPubMedPubMedCentral Deville WL, Buntinx F, Bouter LM, Montori VM, de Vet HC, van der Windt DA, Bezemer PD: Conducting systematic reviews of diagnostic studies: didactic guidelines. BMC Med Res Methodol. 2002, 2 (1): 9-10.1186/1471-2288-2-9.CrossRefPubMedPubMedCentral
19.
go back to reference Deeks JJ: Systematic reviews in health care: Systematic reviews of evaluations of diagnostic and screening tests. BMJ. 2001, 323 (7305): 157-162. 10.1136/bmj.323.7305.157.CrossRefPubMedPubMedCentral Deeks JJ: Systematic reviews in health care: Systematic reviews of evaluations of diagnostic and screening tests. BMJ. 2001, 323 (7305): 157-162. 10.1136/bmj.323.7305.157.CrossRefPubMedPubMedCentral
21.
go back to reference Littenberg B, Moses LE: Estimating diagnostic accuracy from multiple conflicting reports: a new meta-analytic method. Med Decis Making. 1993, 13: 313-321.CrossRefPubMed Littenberg B, Moses LE: Estimating diagnostic accuracy from multiple conflicting reports: a new meta-analytic method. Med Decis Making. 1993, 13: 313-321.CrossRefPubMed
22.
go back to reference Song F, Khan KS, Dinnes J, Sutton AJ: Asymmetric funnel plots and publication bias in meta-analyses of diagnostic accuracy. Int J Epidemiol. 2002, 31: 88-95. 10.1093/ije/31.1.88.CrossRefPubMed Song F, Khan KS, Dinnes J, Sutton AJ: Asymmetric funnel plots and publication bias in meta-analyses of diagnostic accuracy. Int J Epidemiol. 2002, 31: 88-95. 10.1093/ije/31.1.88.CrossRefPubMed
24.
go back to reference Abanto SMH, Hirata MH, Hirata RDC, Mamizuka EM, Schmal M, Hoshino-Shimizu S: Evaluation of Henes-PCR assay for Mycobacterium detection in different clinical specimens from patients with or without tuberculosis-associated HIV infection. J Clin Lab Anal. 2000, 14: 238-245. 10.1002/1098-2825(2000)14:5<238::AID-JCLA7>3.3.CO;2-A.CrossRef Abanto SMH, Hirata MH, Hirata RDC, Mamizuka EM, Schmal M, Hoshino-Shimizu S: Evaluation of Henes-PCR assay for Mycobacterium detection in different clinical specimens from patients with or without tuberculosis-associated HIV infection. J Clin Lab Anal. 2000, 14: 238-245. 10.1002/1098-2825(2000)14:5<238::AID-JCLA7>3.3.CO;2-A.CrossRef
25.
go back to reference Almeda J, Garcia A, Gonzalez J, Quinto L, Ventura PJ, Vidal R, Rufi G, Martinez JA, Jimenez de Anta MT, Trilla A: Clinical evaluation of an in-house IS6110 polymerase chain reaction for diagnosis of tuberculosis. Eur J Clin Microbiol Infect Dis. 2000, 19: 859-867. 10.1007/s100960000375.CrossRefPubMed Almeda J, Garcia A, Gonzalez J, Quinto L, Ventura PJ, Vidal R, Rufi G, Martinez JA, Jimenez de Anta MT, Trilla A: Clinical evaluation of an in-house IS6110 polymerase chain reaction for diagnosis of tuberculosis. Eur J Clin Microbiol Infect Dis. 2000, 19: 859-867. 10.1007/s100960000375.CrossRefPubMed
26.
go back to reference Artiles F, Jose Pena M, Isolina Campos-Herrero M, Lafarga B: Clinical evaluation of the Amplified Mycobacterium Tuberculosis Direct 2 test. Enferm Infecc Microbiol Clin. 2001, 19: 53-56.CrossRefPubMed Artiles F, Jose Pena M, Isolina Campos-Herrero M, Lafarga B: Clinical evaluation of the Amplified Mycobacterium Tuberculosis Direct 2 test. Enferm Infecc Microbiol Clin. 2001, 19: 53-56.CrossRefPubMed
27.
28.
go back to reference D'Amato RF, Hochstein LH, Colaninno PM, Scardamaglia M, Kim K, Mastellone AJ, Patel RC, Alkhuja S, Tevere VJ, Miller A: Application of the Roche Amplicor Mycobacterium tuberculosis (PCR) test to specimens other than respiratory secretions. Diagn Microbiol Infect Dis. 1996, 24: 15-17. 10.1016/0732-8893(95)00256-1.CrossRefPubMed D'Amato RF, Hochstein LH, Colaninno PM, Scardamaglia M, Kim K, Mastellone AJ, Patel RC, Alkhuja S, Tevere VJ, Miller A: Application of the Roche Amplicor Mycobacterium tuberculosis (PCR) test to specimens other than respiratory secretions. Diagn Microbiol Infect Dis. 1996, 24: 15-17. 10.1016/0732-8893(95)00256-1.CrossRefPubMed
29.
go back to reference Dar L, Sharma SK, Bhanu NV, Broor S, Chakraborty M, Pande JN, Seth P: Diagnosis of pulmonary tuberculosis by polymerase chain reaction for MPB64 gene: an evaluation in a blind study. Indian J Chest Dis Allied Sci. 1998, 40: 5-16.PubMed Dar L, Sharma SK, Bhanu NV, Broor S, Chakraborty M, Pande JN, Seth P: Diagnosis of pulmonary tuberculosis by polymerase chain reaction for MPB64 gene: an evaluation in a blind study. Indian J Chest Dis Allied Sci. 1998, 40: 5-16.PubMed
30.
go back to reference de Lassence A, Lecossier D, Pierre C, Cadranel J, Stern M, Hance AJ: Detection of mycobacterial DNA in pleural fluid from patients with tuberculous pleurisy by means of the polymerase chain reaction: comparison of two protocols. Thorax. 1992, 47: 265-269.CrossRefPubMedPubMedCentral de Lassence A, Lecossier D, Pierre C, Cadranel J, Stern M, Hance AJ: Detection of mycobacterial DNA in pleural fluid from patients with tuberculous pleurisy by means of the polymerase chain reaction: comparison of two protocols. Thorax. 1992, 47: 265-269.CrossRefPubMedPubMedCentral
31.
go back to reference de Wit D, Maartens G, Steyn L: A comparative study of the polymerase chain reaction and conventional procedures for the diagnosis of tuberculous pleural effusion. Tuber Lung Dis. 1992, 73: 262-267. 10.1016/0962-8479(92)90130-C.CrossRefPubMed de Wit D, Maartens G, Steyn L: A comparative study of the polymerase chain reaction and conventional procedures for the diagnosis of tuberculous pleural effusion. Tuber Lung Dis. 1992, 73: 262-267. 10.1016/0962-8479(92)90130-C.CrossRefPubMed
32.
go back to reference de Wit D, Steyn L, Shoemaker S, Sogin M: Direct detection of Mycobacterium tuberculosis in clinical specimens by DNA amplification. J Clin Microbiol. 1990, 28: 2437-2441.PubMedPubMedCentral de Wit D, Steyn L, Shoemaker S, Sogin M: Direct detection of Mycobacterium tuberculosis in clinical specimens by DNA amplification. J Clin Microbiol. 1990, 28: 2437-2441.PubMedPubMedCentral
33.
go back to reference Ehlers S, Ignatius R, Regnath T, Hahn H: Diagnosis of extrapulmonary tuberculosis by Gen-Probe amplified Mycobacterium tuberculosis direct test. J Clin Microbiol. 1996, 34: 2275-2279.PubMedPubMedCentral Ehlers S, Ignatius R, Regnath T, Hahn H: Diagnosis of extrapulmonary tuberculosis by Gen-Probe amplified Mycobacterium tuberculosis direct test. J Clin Microbiol. 1996, 34: 2275-2279.PubMedPubMedCentral
34.
go back to reference Gamboa F, Manterola JM, Lonca J, Vinado B, Matas L, Gimenez M, Manzano JR, Rodrigo C, Cardona PJ, Padilla E: Rapid detection of Mycobacterium tuberculosis in respiratory specimens, blood and other non-respiratory specimens by amplification of rRNA. Int J Tuberc Lung Dis. 1997, 1: 542-555.PubMed Gamboa F, Manterola JM, Lonca J, Vinado B, Matas L, Gimenez M, Manzano JR, Rodrigo C, Cardona PJ, Padilla E: Rapid detection of Mycobacterium tuberculosis in respiratory specimens, blood and other non-respiratory specimens by amplification of rRNA. Int J Tuberc Lung Dis. 1997, 1: 542-555.PubMed
35.
go back to reference Gamboa F, Manterola JM, Vinado B, Matas L, Gimenez M, Lonca J, Manzano JR, Rodrigo C, Cardona PJ, Padilla E: Direct detection of Mycobacterium tuberculosis complex in nonrespiratory specimens by Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test. J Clin Microbiol. 1997, 35: 307-310.PubMedPubMedCentral Gamboa F, Manterola JM, Vinado B, Matas L, Gimenez M, Lonca J, Manzano JR, Rodrigo C, Cardona PJ, Padilla E: Direct detection of Mycobacterium tuberculosis complex in nonrespiratory specimens by Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test. J Clin Microbiol. 1997, 35: 307-310.PubMedPubMedCentral
36.
go back to reference Gunisha P, Madhavan HN, Jayanthi U, Therese KL: Polymerase chain reaction using IS6110 primer to detect Mycobacterium tuberculosis in clinical samples. Indian J Pathol Microbiol. 2001, 44: 97-102.PubMed Gunisha P, Madhavan HN, Jayanthi U, Therese KL: Polymerase chain reaction using IS6110 primer to detect Mycobacterium tuberculosis in clinical samples. Indian J Pathol Microbiol. 2001, 44: 97-102.PubMed
37.
go back to reference Gracia HMC, Lana AT, Fernandez ML, Fernandez CO, Hernandez JB, Hernandez CC, Macario CC, Lopez AS: Usefulness of a gene amplification technique (LCx MTB) in the diagnosis of tuberculosis: preliminary results with different sputum samples. Arch Bronconeumol. 1999, 35: 79-83.CrossRef Gracia HMC, Lana AT, Fernandez ML, Fernandez CO, Hernandez JB, Hernandez CC, Macario CC, Lopez AS: Usefulness of a gene amplification technique (LCx MTB) in the diagnosis of tuberculosis: preliminary results with different sputum samples. Arch Bronconeumol. 1999, 35: 79-83.CrossRef
38.
go back to reference Kaltwasser G, Garcia S, Salinas AM, Montiel F: Enzymatic DNA amplification (PCR) in the diagnosis of extrapulmonary Mycobacterium tuberculosis infection. Mol Cell Probes. 1993, 7: 465-470. 10.1006/mcpr.1993.1069.CrossRefPubMed Kaltwasser G, Garcia S, Salinas AM, Montiel F: Enzymatic DNA amplification (PCR) in the diagnosis of extrapulmonary Mycobacterium tuberculosis infection. Mol Cell Probes. 1993, 7: 465-470. 10.1006/mcpr.1993.1069.CrossRefPubMed
39.
go back to reference Laniado-Laborin R, Enriquez-Rosales ML, Licea Navarroll AF: Diagnosis of tuberculosis by detection of Mycobacterium tuberculosis with a noncommercial polymerase chain reaction. Revista del Instituto Nacional de Enfermedades Respiratorias. 2001, 14: 22-26. Laniado-Laborin R, Enriquez-Rosales ML, Licea Navarroll AF: Diagnosis of tuberculosis by detection of Mycobacterium tuberculosis with a noncommercial polymerase chain reaction. Revista del Instituto Nacional de Enfermedades Respiratorias. 2001, 14: 22-26.
40.
go back to reference Mangiapan G, Vokurka M, Schouls L, Cadranel J, Lecossier D, van Embden J, Hance AJ: Sequence capture-PCR improves detection of mycobacterial DNA in clinical specimens. J Clin Microbiol. 1996, 34: 1209-1215.PubMedPubMedCentral Mangiapan G, Vokurka M, Schouls L, Cadranel J, Lecossier D, van Embden J, Hance AJ: Sequence capture-PCR improves detection of mycobacterial DNA in clinical specimens. J Clin Microbiol. 1996, 34: 1209-1215.PubMedPubMedCentral
41.
go back to reference Martins LC, Paschoal IA, Von Nowakonski A, Silva SA, Costa FF, Ward LS: Nested-PCR using MPB64 fragment improves the diagnosis of pleural and meningeal tuberculosis. Rev Soc Bras Med Trop. 2000, 33: 253-257.PubMed Martins LC, Paschoal IA, Von Nowakonski A, Silva SA, Costa FF, Ward LS: Nested-PCR using MPB64 fragment improves the diagnosis of pleural and meningeal tuberculosis. Rev Soc Bras Med Trop. 2000, 33: 253-257.PubMed
42.
go back to reference Mitarai S, Shishido H, Kurashima A, Tamura A, Nagai H: Comparative study of amplicor Mycobacterium PCR and conventional methods for the diagnosis of pleuritis caused by mycobacterial infection. Int J Tuberc Lung Dis. 2000, 4: 871-876.PubMed Mitarai S, Shishido H, Kurashima A, Tamura A, Nagai H: Comparative study of amplicor Mycobacterium PCR and conventional methods for the diagnosis of pleuritis caused by mycobacterial infection. Int J Tuberc Lung Dis. 2000, 4: 871-876.PubMed
43.
go back to reference Miyazaki Y, Koga H, Kohno S, Kaku M: Nested polymerase chain reaction for detection of Mycobacterium tuberculosis in clinical samples. J Clin Microbiol. 1993, 31: 2228-2232.PubMedPubMedCentral Miyazaki Y, Koga H, Kohno S, Kaku M: Nested polymerase chain reaction for detection of Mycobacterium tuberculosis in clinical samples. J Clin Microbiol. 1993, 31: 2228-2232.PubMedPubMedCentral
44.
go back to reference Morcillo NS, Chirico MC, Trovero AC, Vignoles M, Dolmann AL: Clinical utility of a ligase chain reaction commercial kit for the diagnosis of pulmonary and extrapulmonary tuberculosis. Rev Argent Microbiol. 2001, 33: 187-196.PubMed Morcillo NS, Chirico MC, Trovero AC, Vignoles M, Dolmann AL: Clinical utility of a ligase chain reaction commercial kit for the diagnosis of pulmonary and extrapulmonary tuberculosis. Rev Argent Microbiol. 2001, 33: 187-196.PubMed
45.
go back to reference Nagesh BS, Sehgal S, Jindal SK, Arora SK: Evaluation of polymerase chain reaction for detection of Mycobacterium tuberculosis in pleural fluid. Chest. 2001, 119: 1737-1741. 10.1378/chest.119.6.1737.CrossRefPubMed Nagesh BS, Sehgal S, Jindal SK, Arora SK: Evaluation of polymerase chain reaction for detection of Mycobacterium tuberculosis in pleural fluid. Chest. 2001, 119: 1737-1741. 10.1378/chest.119.6.1737.CrossRefPubMed
46.
go back to reference Palacios JJ, Ferro J, Ruiz Palma N, Roces SG, Villar H, Rodriguez J, Prendes P: Comparison of the ligase chain reaction with solid and liquid culture media for routine detection of Mycobacterium tuberculosis in nonrespiratory specimens. Eur J Clin Microbiol Infect Dis. 1998, 17: 767-772. 10.1007/s100960050182.CrossRefPubMed Palacios JJ, Ferro J, Ruiz Palma N, Roces SG, Villar H, Rodriguez J, Prendes P: Comparison of the ligase chain reaction with solid and liquid culture media for routine detection of Mycobacterium tuberculosis in nonrespiratory specimens. Eur J Clin Microbiol Infect Dis. 1998, 17: 767-772. 10.1007/s100960050182.CrossRefPubMed
47.
go back to reference Pao CC, Yen TS, You JB, Maa JS, Fiss EH, Chang CH: Detection and identification of Mycobacterium tuberculosis by DNA amplification. J Clin Microbiol. 1990, 28: 1877-1880.PubMedPubMedCentral Pao CC, Yen TS, You JB, Maa JS, Fiss EH, Chang CH: Detection and identification of Mycobacterium tuberculosis by DNA amplification. J Clin Microbiol. 1990, 28: 1877-1880.PubMedPubMedCentral
48.
go back to reference Parandaman V, Narayanan S, Narayanan PR: Utility of polymerase chain reaction using two probes for rapid diagnosis of tubercular pleuritis in comparison to conventional methods. Indian J Med Res. 2000, 112: 47-51.PubMed Parandaman V, Narayanan S, Narayanan PR: Utility of polymerase chain reaction using two probes for rapid diagnosis of tubercular pleuritis in comparison to conventional methods. Indian J Med Res. 2000, 112: 47-51.PubMed
49.
go back to reference Pfyffer GE, Kissling P, Jahn EM, Welscher HM, Salfinger M, Weber R: Diagnostic performance of amplified Mycobacterium tuberculosis direct test with cerebrospinal fluid, other nonrespiratory, and respiratory specimens. J Clin Microbiol. 1996, 34: 834-841.PubMedPubMedCentral Pfyffer GE, Kissling P, Jahn EM, Welscher HM, Salfinger M, Weber R: Diagnostic performance of amplified Mycobacterium tuberculosis direct test with cerebrospinal fluid, other nonrespiratory, and respiratory specimens. J Clin Microbiol. 1996, 34: 834-841.PubMedPubMedCentral
50.
go back to reference Portillo-Gomez L, Morris SL, Panduro A: Rapid and efficient detection of extra-pulmonary Mycobacterium tuberculosis by PCR analysis. Int J Tuberc Lung Dis. 2000, 4: 361-370.PubMed Portillo-Gomez L, Morris SL, Panduro A: Rapid and efficient detection of extra-pulmonary Mycobacterium tuberculosis by PCR analysis. Int J Tuberc Lung Dis. 2000, 4: 361-370.PubMed
51.
go back to reference Querol JM, Minguez J, Garcia-Sanchez E, Farga MA, Gimeno C, Garcia-de-Lomas J: Rapid diagnosis of pleural tuberculosis by polymerase chain reaction. Am J Respir Crit Care Med. 1995, 152: 1977-1981.CrossRefPubMed Querol JM, Minguez J, Garcia-Sanchez E, Farga MA, Gimeno C, Garcia-de-Lomas J: Rapid diagnosis of pleural tuberculosis by polymerase chain reaction. Am J Respir Crit Care Med. 1995, 152: 1977-1981.CrossRefPubMed
52.
go back to reference Rantakokko-Jalava K, Marjamaki M, Marttila H, Makela L, Valtonen V, Viljanen MK: LCx Mycobacterium tuberculosis assay is valuable with respiratory specimens, but provides little help in the diagnosis of extrapulmonary tuberculosis. Ann Med. 2001, 33: 55-62.CrossRefPubMed Rantakokko-Jalava K, Marjamaki M, Marttila H, Makela L, Valtonen V, Viljanen MK: LCx Mycobacterium tuberculosis assay is valuable with respiratory specimens, but provides little help in the diagnosis of extrapulmonary tuberculosis. Ann Med. 2001, 33: 55-62.CrossRefPubMed
53.
go back to reference Reechaipichitkul W, Lulitanond V, Sungkeeree S, Patjanasoontorn B: Rapid diagnosis of tuberculous pleural effusion using polymerase chain reaction. Southeast Asian J Trop Med Public Health. 2000, 31: 509-514.PubMed Reechaipichitkul W, Lulitanond V, Sungkeeree S, Patjanasoontorn B: Rapid diagnosis of tuberculous pleural effusion using polymerase chain reaction. Southeast Asian J Trop Med Public Health. 2000, 31: 509-514.PubMed
54.
go back to reference Reischl U, Lehn N, Wolf H, Naumann L: Clinical evaluation of the automated COBAS AMPLICOR MTB assay for testing respiratory and nonrespiratory specimens. J Clin Microbiol. 1998, 36: 2853-2860.PubMedPubMedCentral Reischl U, Lehn N, Wolf H, Naumann L: Clinical evaluation of the automated COBAS AMPLICOR MTB assay for testing respiratory and nonrespiratory specimens. J Clin Microbiol. 1998, 36: 2853-2860.PubMedPubMedCentral
55.
go back to reference Shah S, Miller A, Mastellone A, Kim K, Colaninno P, Hochstein L, D'Amato R: Rapid diagnosis of tuberculosis in various biopsy and body fluid specimens by the AMPLICOR Mycobacterium tuberculosis polymerase chain reaction test. Chest. 1998, 113: 1190-1194.CrossRefPubMed Shah S, Miller A, Mastellone A, Kim K, Colaninno P, Hochstein L, D'Amato R: Rapid diagnosis of tuberculosis in various biopsy and body fluid specimens by the AMPLICOR Mycobacterium tuberculosis polymerase chain reaction test. Chest. 1998, 113: 1190-1194.CrossRefPubMed
56.
go back to reference Tan MF, Ng WC, Chan SH, Tan WC: Comparative usefulness of PCR in the detection of Mycobacterium tuberculosis in different clinical specimens. J Med Microbiol. 1997, 46: 164-169.CrossRefPubMed Tan MF, Ng WC, Chan SH, Tan WC: Comparative usefulness of PCR in the detection of Mycobacterium tuberculosis in different clinical specimens. J Med Microbiol. 1997, 46: 164-169.CrossRefPubMed
57.
go back to reference Tan JAMA, Lee BW, Lim TK, Chin NK, Tan CB, Xia JR, Yap HK, Kumarasinghe G: Detection of Mycobacterium tuberculosis in sputum, pleural and bronchoalveolar lavage fluid using DNA amplification of the MPB 64 protein coding gene and IS6110 insertion element. Southeast Asian J Trop Med Public Health. 1995, 26: 247-252.PubMed Tan JAMA, Lee BW, Lim TK, Chin NK, Tan CB, Xia JR, Yap HK, Kumarasinghe G: Detection of Mycobacterium tuberculosis in sputum, pleural and bronchoalveolar lavage fluid using DNA amplification of the MPB 64 protein coding gene and IS6110 insertion element. Southeast Asian J Trop Med Public Health. 1995, 26: 247-252.PubMed
58.
go back to reference Verma A, Dasgupta N, Aggrawal AN, Pande JN, Tyagi JS: Utility of a Mycobacterium-Tuberculosis GC-rich repetitive sequence in the diagnosis of tuberculous pleural effusion by PCR. Indian J Biochem Biophys. 1995, 32: 429-436.PubMed Verma A, Dasgupta N, Aggrawal AN, Pande JN, Tyagi JS: Utility of a Mycobacterium-Tuberculosis GC-rich repetitive sequence in the diagnosis of tuberculous pleural effusion by PCR. Indian J Biochem Biophys. 1995, 32: 429-436.PubMed
59.
go back to reference Villegas MV, Labrada LA, Saravia NG: Evaluation of polymerase chain reaction, adenosine deaminase, and interferon-gamma in pleural fluid for the differential diagnosis of pleural tuberculosis. Chest. 2000, 118: 1355-1364. 10.1378/chest.118.5.1355.CrossRefPubMed Villegas MV, Labrada LA, Saravia NG: Evaluation of polymerase chain reaction, adenosine deaminase, and interferon-gamma in pleural fluid for the differential diagnosis of pleural tuberculosis. Chest. 2000, 118: 1355-1364. 10.1378/chest.118.5.1355.CrossRefPubMed
60.
go back to reference Villena V, Rebollo MJ, Aguado JM, Galan A, Lopez Encuentra A, Palenque E: Polymerase chain reaction for the diagnosis of pleural tuberculosis in immunocompromised and immunocompetent patients. Clin Infect Dis. 1998, 26: 212-214.CrossRefPubMed Villena V, Rebollo MJ, Aguado JM, Galan A, Lopez Encuentra A, Palenque E: Polymerase chain reaction for the diagnosis of pleural tuberculosis in immunocompromised and immunocompetent patients. Clin Infect Dis. 1998, 26: 212-214.CrossRefPubMed
61.
go back to reference Vlaspolder F, Singer P, Roggeveen C: Diagnostic value of an amplification method (Gen-Probe) compared with that of culture for diagnosis of tuberculosis. J Clin Microbiol. 1995, 33: 2699-2703.PubMedPubMedCentral Vlaspolder F, Singer P, Roggeveen C: Diagnostic value of an amplification method (Gen-Probe) compared with that of culture for diagnosis of tuberculosis. J Clin Microbiol. 1995, 33: 2699-2703.PubMedPubMedCentral
62.
go back to reference Valdes L, Jose SE, Alvarez D, Sarandeses A, Pose A, Chomon B, Alvarez-Dobano JM, Salgueiro M, Suarez JR: Diagnosis of tuberculous pleurisy using the biologic parameters adenosine deaminase, lysozyme, and interferon gamma. Chest. 1993, 103: 458-465.CrossRefPubMed Valdes L, Jose SE, Alvarez D, Sarandeses A, Pose A, Chomon B, Alvarez-Dobano JM, Salgueiro M, Suarez JR: Diagnosis of tuberculous pleurisy using the biologic parameters adenosine deaminase, lysozyme, and interferon gamma. Chest. 1993, 103: 458-465.CrossRefPubMed
63.
go back to reference Aoe K, Hiraki A, Murakami T, Eda R, Maeda T, Sugi K, Takeyama H: Diagnostic significance of Interferon-γ in tuberculous pleural effusions. Chest. 2003, 123: 740-744. 10.1378/chest.123.3.740.CrossRefPubMed Aoe K, Hiraki A, Murakami T, Eda R, Maeda T, Sugi K, Takeyama H: Diagnostic significance of Interferon-γ in tuberculous pleural effusions. Chest. 2003, 123: 740-744. 10.1378/chest.123.3.740.CrossRefPubMed
64.
go back to reference Greco S, Girardi E, Masciangelo R, Capoccetta GB, Saltini C: Adenosine deaminase and interferon gamma measurements for the diagnosis of tuberculous pleurisy: a meta-analysis. Int J Tuberc Lung Dis. 2003, 7: 777-86.PubMed Greco S, Girardi E, Masciangelo R, Capoccetta GB, Saltini C: Adenosine deaminase and interferon gamma measurements for the diagnosis of tuberculous pleurisy: a meta-analysis. Int J Tuberc Lung Dis. 2003, 7: 777-86.PubMed
65.
go back to reference Woods GL: Molecular techniques in mycobacterial detection. Arch Pathol Lab Med. 2001, 125: 122-126.PubMed Woods GL: Molecular techniques in mycobacterial detection. Arch Pathol Lab Med. 2001, 125: 122-126.PubMed
66.
go back to reference Noordhoek GT, van Embden JDA, Kolk AHJ: Reliability of nucleic acid amplification for detection of Mycobacterium tuberculosis : an international collaborative quality control study among 30 laboratories. J Clin Microbiol. 1996, 34: 2522-2525.PubMedPubMedCentral Noordhoek GT, van Embden JDA, Kolk AHJ: Reliability of nucleic acid amplification for detection of Mycobacterium tuberculosis : an international collaborative quality control study among 30 laboratories. J Clin Microbiol. 1996, 34: 2522-2525.PubMedPubMedCentral
68.
go back to reference Lijmer JG, Mol BW, Heisterkamp S, Bonsel GJ, Prins MH, van der Meulen JH, Bossuyt PM: Empirical evidence of design-related bias in studies of diagnostic tests. JAMA. 1999, 282: 1061-1066. 10.1001/jama.282.11.1061.CrossRefPubMed Lijmer JG, Mol BW, Heisterkamp S, Bonsel GJ, Prins MH, van der Meulen JH, Bossuyt PM: Empirical evidence of design-related bias in studies of diagnostic tests. JAMA. 1999, 282: 1061-1066. 10.1001/jama.282.11.1061.CrossRefPubMed
69.
go back to reference van Embden JD, Cave MD, Crawford JT, Dale JW, Eisenach KD, Gicquel B, Hermans P, Martin C, McAdam R, Shinnick TM: Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol. 1993, 31: 406-409.PubMedPubMedCentral van Embden JD, Cave MD, Crawford JT, Dale JW, Eisenach KD, Gicquel B, Hermans P, Martin C, McAdam R, Shinnick TM: Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J Clin Microbiol. 1993, 31: 406-409.PubMedPubMedCentral
70.
go back to reference Sarmiento OL, Weigle KA, Alexander J, Weber DJ, Miller WC: Assessment by meta-analysis of PCR for diagnosis of smear-negative pulmonary tuberculosis. J Clin Microbiol. 2003, 41 (7): 3233-40. 10.1128/JCM.41.7.3233-3240.2003.CrossRefPubMedPubMedCentral Sarmiento OL, Weigle KA, Alexander J, Weber DJ, Miller WC: Assessment by meta-analysis of PCR for diagnosis of smear-negative pulmonary tuberculosis. J Clin Microbiol. 2003, 41 (7): 3233-40. 10.1128/JCM.41.7.3233-3240.2003.CrossRefPubMedPubMedCentral
71.
go back to reference Pai M, Flores LL, Pai N, Hubbard A, Riley LW, Colford JM: Diagnostic accuracy of nucleic acid amplification tests for tuberculous meningitis: a systematic review and meta-analysis. Lancet Infect Dis. 2003, 3: 633-43. 10.1016/S1473-3099(03)00772-2.CrossRefPubMed Pai M, Flores LL, Pai N, Hubbard A, Riley LW, Colford JM: Diagnostic accuracy of nucleic acid amplification tests for tuberculous meningitis: a systematic review and meta-analysis. Lancet Infect Dis. 2003, 3: 633-43. 10.1016/S1473-3099(03)00772-2.CrossRefPubMed
Metadata
Title
Nucleic acid amplification tests in the diagnosis of tuberculous pleuritis: a systematic review and meta-analysis
Authors
Madhukar Pai
Laura L Flores
Alan Hubbard
Lee W Riley
John M Colford Jr
Publication date
01-12-2004
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2004
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/1471-2334-4-6

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