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01-06-2020 | Annotated Sequence Record

Genomic characterisation of a newly identified badnavirus infecting ivy (Hedera helix)

Authors: Rachelle Bester, Johan T. Burger, Hans J. Maree

Published in: Archives of Virology | Issue 6/2020

Abstract

High-throughput sequencing (HTS) was used to investigate ringspots on ivy (Hedera helix) leaves. De novo assembly of HTS data generated from a total RNA extract from these leaves yielded a contig with sequence similarity to viruses of the genus Badnavirus, family Caulimoviridae. The complete genome sequence of this virus consists of 8,885 nucleotides and has three open reading frames (ORFs). Genome organisation and phylogenetic analysis identifies this newly identified virus as a new member of the genus Badnavirus for which we propose the name "ivy ringspot-associated virus" (IRSaV).

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Title: Genomic characterisation of a newly identified badnavirus infecting ivy (Hedera helix)
Authors: Rachelle Bester
Johan T. Burger
Hans J. Maree
Publication date: 01-06-2020
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 6/2020
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-020-04627-1

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