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Published in: Archives of Virology 11/2018

01-11-2018 | Annotated Sequence Record

Complete genome analysis of bacteriophage AsXd-1, a new member of the genus Hk97virus, family Siphoviridae

Authors: Zhenlong Yang, Shengjian Yuan, Ling Chen, Quan Liu, Haoran Zhang, Yingfei Ma, Ting Wei, Shuqiang Huang

Published in: Archives of Virology | Issue 11/2018

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Abstract

AsXd-1, a bacteriophage that infects Aeromonas salmonicida, was isolated from the wastewater of a seafood market in Shenzhen, China. The 39,014-bp genome of this phage contains 52 open reading frames (ORFs), 30 of which were found to be homologous to reference sequences that putatively encode functional phage proteins. Nine out of the remaining 22 ORFs with unknown functions were unique to AsXd-1. Gene annotation suggests that AsXd-1 has both lysogenic and lytic life cycles. Furthermore, both phylogenetic analysis based on the large subunit of terminase and genome sequence comparisons show that AsXd-1 is closely related to phages belonging to the genus Hk97virus. We thus propose AsXd-1 as a new member of the genus Hk97virus within the family Siphoviridae.
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Metadata
Title
Complete genome analysis of bacteriophage AsXd-1, a new member of the genus Hk97virus, family Siphoviridae
Authors
Zhenlong Yang
Shengjian Yuan
Ling Chen
Quan Liu
Haoran Zhang
Yingfei Ma
Ting Wei
Shuqiang Huang
Publication date
01-11-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 11/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3977-5

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