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Archives of Virology
Published in: Archives of Virology 7/2018

01-07-2018 | Annotated Sequence Record

Genomic characterization and phylogenetic analysis of the novel Pseudomonas phage PPSC2

Authors: Xiang Wu, Yongfeng Wu, Ya Tang, Bingcheng Gan

Published in: Archives of Virology | Issue 7/2018

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Abstract

We isolated a Pseudomonas phage infecting Pseudomonas fluorescens SA1 separated from a soil sample collected in Sichuan Province, China. This phage, which we named PPSC2, has a genome that is composed of a 97,330-bp-long linear double-stranded DNA with 47.51% G+C content and 168 putative protein-coding genes. We identified 20 tRNA genes in the genome of PPSC2, and the tRNA GC content ranged from 44.2% to 58.4%. Phylogenetic and BLASTn analysis revealed that the Pseudomonas phage PPSC2 should be considered a new member of the family Myoviridae.
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Metadata
Title
Genomic characterization and phylogenetic analysis of the novel Pseudomonas phage PPSC2
Authors
Xiang Wu
Yongfeng Wu
Ya Tang
Bingcheng Gan
Publication date
01-07-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 7/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3801-2

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