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Published in: Archives of Virology 5/2018

01-05-2018 | Annotated Sequence Record

Molecular characterization of a novel rhabdovirus infecting blackcurrant identified by high-throughput sequencing

Authors: L.-P. Wu, T. Yang, H.-W. Liu, J. Postman, R. Li

Published in: Archives of Virology | Issue 5/2018

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Abstract

A large contig with sequence similarities to several nucleorhabdoviruses was identified by high-throughput sequencing analysis from a black currant (Ribes nigrum L.) cultivar. The complete genome sequence of this new nucleorhabdovirus is 14,432 nucleotides long. Its genomic organization is very similar to those of unsegmented plant rhabdoviruses, containing six open reading frames in the order 3′-N-P-P3-M-G-L-5. The virus, which is provisionally named “black currant-associated rhabdovirus”, is 41-52% identical in its genome nucleotide sequence to other nucleorhabdoviruses and may represent a new species in the genus Nucleorhabdovirus.
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Metadata
Title
Molecular characterization of a novel rhabdovirus infecting blackcurrant identified by high-throughput sequencing
Authors
L.-P. Wu
T. Yang
H.-W. Liu
J. Postman
R. Li
Publication date
01-05-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 5/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3709-x

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