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01-09-2016 | Brief Report

Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines

Authors: Rubigilda Paraguison-Alili, Clarissa Yvonne J. Domingo

Published in: Archives of Virology | Issue 9/2016

Abstract

To trace the possible route of introduction of porcine epidemic diarrhea virus (PEDV), the phylogenetic relationships of PEDV strains in the regions of epidemicity in the Philippines to PEDV strains that are endemic in other countries were investigated. Partial nucleotide sequences of the S1 spike gene was determined from the PEDV-positive samples and compared with S1 sequences from other countries. Phylogenetic analysis indicated that PEDV strains in the Philippines segregate into two groups. Members of group 1 are related to strains from the USA, Taiwan, Japan and Canada, while those in group 2 are related to strains from China and Vietnam.

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Title: Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines
Authors: Rubigilda Paraguison-Alili
Clarissa Yvonne J. Domingo
Publication date: 01-09-2016
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 9/2016
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-016-2938-0

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