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01-02-2015 | Annotated Sequence Record

Complete genome sequence of motherwort yellow mottle virus, a novel putative member of the genus Torradovirus

Authors: Jang-Kyun Seo, Minji Kang, Hae-Ryun Kwak, Mi-Kyeong Kim, Chang-Seok Kim, Su-Heon Lee, Jeong-Soo Kim, Hong-Soo Choi

Published in: Archives of Virology | Issue 2/2015

Abstract

The complete genome sequence of a new virus isolated from a motherwort plant exhibiting yellow mottle, mild mosaic, and stunting symptoms in Andong, Korea, was determined. The genome of this virus is composed of two single-stranded RNAs (7068 and 4963 nucleotides in length, respectively) carrying poly(A) tails. RNA1 contains one large open reading frame (RNA1-ORF1), while two potential ORFs (RNA2-ORF1 and RNA2-ORF2) were found in RNA2. BLAST searches of protein databases showed that RNA1-ORF1 and RNA2-ORF2 have maximum amino acid sequence identities of 53 % and 57 % to the RNA1-ORF1 and RNA2-ORF2, respectively, of lettuce necrotic leaf curl virus (LNLCV, a recently identified torradovirus). Phylogenetic analysis provided further evidence that the virus identified in this study is probably a member of a new species in the genus Torradovirus. The name “motherwort yellow mottle virus” (MYMoV) is proposed for this new virus.

Adams MJ, King AM, Carstens EB (2013) Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013). Arch Virol 158:2023–2030PubMedCrossRef

Barbosa JC, Eckstein B, Bergamin Filho A, Rezende JAM, Dallagnol LJ (2013) First report of tomato yellow spot virus infecting Leonurus sibiricus in Brazil. Plant Dis 97:289CrossRef

Batuman O, Kuo YW, Palmieri M, Rojas MR, Gilbertson RL (2010) Tomato chocolate spot virus, a member of a new torradovirus species that causes a necrosis-associated disease of tomato in Guatemala. Arch Virol 155:857–869PubMedCentralPubMedCrossRef

Islam MA, Ahmed F, Das AK, Bachar SC (2005) Analgesic and anti-inflammatory activity of Leonurus sibiricus. Fitoterapia 76:359–362PubMedCrossRef

Schelhorn SE, Fischer M, Tolosi L, Altmuller J, Nurnberg P, Pfister H, Lengauer T, Berthold F (2013) Sensitive detection of viral transcripts in human tumor transcriptomes. PLoS Comput Biol 9:e1003228PubMedCentralPubMedCrossRef

Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739PubMedCentralPubMedCrossRef

Turina M, Ricker MD, Lenzi R, Masenga V, Ciuffo M (2007) A severe disease of tomato in the Culiacan area (Sinaloa, Mexico) is caused by a new picorna-like viral species. Plant Dis 91:932–941CrossRef

Verbeek M, Dullemans AM, van den Heuvel JF, Maris PC, van der Vlugt RA (2007) Identification and characterisation of tomato torrado virus, a new plant picorna-like virus from tomato. Arch Virol 152:881–890PubMedCentralPubMedCrossRef

Verbeek M, Dullemans AM, van den Heuvel JF, Maris PC, van der Vlugt RA (2008) Tomato marchitez virus, a new plant picorna-like virus from tomato related to tomato torrado virus. Arch Virol 153:127–134PubMedCrossRef

10.

Verbeek M, Dullemans A, van den Heuvel H, Maris P, van der Vlugt R (2010) Tomato chocolate virus: a new plant virus infecting tomato and a proposed member of the genus Torradovirus. Arch Virol 155:751–755PubMedCentralPubMedCrossRef

11.

Verbeek M, Dullemans AM, van Raaij HM, Verhoeven JT, van der Vlugt RA (2014) Lettuce necrotic leaf curl virus, a new plant virus infecting lettuce and a proposed member of the genus Torradovirus. Arch Virol 159:801–805PubMedCrossRef

Title: Complete genome sequence of motherwort yellow mottle virus, a novel putative member of the genus Torradovirus
Authors: Jang-Kyun Seo
Minji Kang
Hae-Ryun Kwak
Mi-Kyeong Kim
Chang-Seok Kim
Su-Heon Lee
Jeong-Soo Kim
Hong-Soo Choi
Publication date: 01-02-2015
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 2/2015
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-014-2254-5

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