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Archives of Virology
Published in: Archives of Virology 12/2013

01-12-2013 | Original Article

Comparison of genomic and amino acid sequences of eight Japanese encephalitis virus isolates from bats

Authors: Shan Liu, Xing Li, Zhiyong Chen, Yixiong Chen, Qionghua Zhang, Yuxue Liao, Jie Zhou, Xuemei Ke, Lizhen Ma, Jianpeng Xiao, Yi Wu, Zhong Chen, Junhua Zhou, Xueyan Zheng, Jiandong Li, Qing Chen

Published in: Archives of Virology | Issue 12/2013

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Abstract

We compared nucleotide and deduced amino acid sequences of eight Japanese encephalitis virus (JEV) isolates derived from bats in China. We also compared the bat JEV isolates with other JEV isolates available from GenBank to determine their genetic similarity. We found a high genetic homogeneity among the bat JEVs isolated in different geographical areas from various bat species at different time periods. All eight bat JEV isolates belonged to genotype III. The mean evolutionary rate of bat JEV isolates was lower than those of isolates of other origin, but this difference was not statistically significant. Based on these results, we presume that the bat JEV isolates might be evolutionarily conserved. The eight bat JEV isolates were phylogenetically similar to mosquito BN19 and human Liyujie isolates of JEV. These results indicate that bats might be involved in natural cycle of JEV.
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Metadata
Title
Comparison of genomic and amino acid sequences of eight Japanese encephalitis virus isolates from bats
Authors
Shan Liu
Xing Li
Zhiyong Chen
Yixiong Chen
Qionghua Zhang
Yuxue Liao
Jie Zhou
Xuemei Ke
Lizhen Ma
Jianpeng Xiao
Yi Wu
Zhong Chen
Junhua Zhou
Xueyan Zheng
Jiandong Li
Qing Chen
Publication date
01-12-2013
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 12/2013
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-013-1777-5

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