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01-09-2009 | Brief Report

Characterization of the complete genome sequence of pike fry rhabdovirus

Authors: Hong-Lian Chen, Hong Liu, Zong-Xiao Liu, Jun-Qiang He, Long-Ying Gao, Xiu-Jie Shi, Yu-Lin Jiang

Published in: Archives of Virology | Issue 9/2009

Abstract

The complete genome sequence of pike fry rhabdovirus (PFRV), consisting of 11,097 nucleotides, was determined. The genome contains five genes, encoding the nucleoprotein (N), phosphoprotein (P), matrix protein (M), glycoprotein (G), and RNA-dependent RNA polymerase (L) protein in the order 3′-N-P-M-G-L-5′. 3′ leader- and 5′ trailer- sequences in the PFRV genome show inverse complementarity. The PFRV proteins share the highest homology to the proteins of spring viremia of carp virus (SVCV), ranging from 55.3 to 91.4%. Phylogenetic analysis of the five proteins showed that PFRV clusters with SVCV and is closely related to the mammalian vesiculoviruses, 903/87, STRV and SCRV.

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Title: Characterization of the complete genome sequence of pike fry rhabdovirus
Authors: Hong-Lian Chen
Hong Liu
Zong-Xiao Liu
Jun-Qiang He
Long-Ying Gao
Xiu-Jie Shi
Yu-Lin Jiang
Publication date: 01-09-2009
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 9/2009
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-009-0455-0

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