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Published in: International Journal of Legal Medicine 3/2018

01-05-2018 | Population Data

Genetic characteristics of 19 STRs in Chinese Uzbek ethnic and its phylogenetic relationships with other 24 populations

Authors: Xiaoye Jin, Wei Cui, Yuanyuan Wei, Yuling Mu, Qian Dong, Chong Chen, Yuxin Guo, Tingting Kong, Bofeng Zhu, Jiangang Chen

Published in: International Journal of Legal Medicine | Issue 3/2018

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Abstract

Allelic frequencies and genetic polymorphisms of 19 short tandem repeats loci were investigated so as to provide more genetic data for forensic applications in Chinese Uzbek group; besides, we evaluated phylogenetic relationships of Uzbek group with other populations. All loci were observed to conform to Hardy-Weinberg equilibrium after Bonferroni’s correction. Two hundred and nine alleles were identified in 212 unrelated healthy Uzbek individuals and their allelic frequencies ranged from 0.0024 to 0.5259. The cumulative discrimination power and cumulative probability of exclusion were 0.999999999999999999999996501 and 0.999999998759, respectively. The results of population differentiation comparison, principal component analysis, and phylogenetic tree revealed that Uzbek group had close relationships with Uyghur and Kazakh groups.
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Literature
1.
go back to reference Zhang Z, Wei S, Gui H, Yuan Z, Li S (2014) The contribution of genetic diversity to subdivide populations living in the silk road of China. PLoS One 9:e97344CrossRefPubMedPubMedCentral Zhang Z, Wei S, Gui H, Yuan Z, Li S (2014) The contribution of genetic diversity to subdivide populations living in the silk road of China. PLoS One 9:e97344CrossRefPubMedPubMedCentral
2.
go back to reference Shi YY, Lin HE (2005) SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci. Cell Res 15:97–98CrossRefPubMed Shi YY, Lin HE (2005) SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci. Cell Res 15:97–98CrossRefPubMed
3.
go back to reference Kovach WL (1998) MVSP: a multivariate statistical package for windows, Ver Kovach WL (1998) MVSP: a multivariate statistical package for windows, Ver
4.
go back to reference Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, Evol Distance, Maximum Parsimony Methods Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, Evol Distance, Maximum Parsimony Methods
5.
go back to reference Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic-linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331PubMedPubMedCentral Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic-linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331PubMedPubMedCentral
6.
go back to reference Wells RS, Yuldasheva N, Ruzibakiev R et al (2001) The Eurasian heartland: a continental perspective on Y-chromosome diversity. Proc Natl Acad Sci U S A 98:10244–10249CrossRefPubMedPubMedCentral Wells RS, Yuldasheva N, Ruzibakiev R et al (2001) The Eurasian heartland: a continental perspective on Y-chromosome diversity. Proc Natl Acad Sci U S A 98:10244–10249CrossRefPubMedPubMedCentral
Metadata
Title
Genetic characteristics of 19 STRs in Chinese Uzbek ethnic and its phylogenetic relationships with other 24 populations
Authors
Xiaoye Jin
Wei Cui
Yuanyuan Wei
Yuling Mu
Qian Dong
Chong Chen
Yuxin Guo
Tingting Kong
Bofeng Zhu
Jiangang Chen
Publication date
01-05-2018
Publisher
Springer Berlin Heidelberg
Published in
International Journal of Legal Medicine / Issue 3/2018
Print ISSN: 0937-9827
Electronic ISSN: 1437-1596
DOI
https://doi.org/10.1007/s00414-017-1717-0

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