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Archives of Virology
Published in: Archives of Virology 6/2019

01-06-2019 | Annotated Sequence Record

Grapevine virus M, a novel vitivirus discovered in the American hybrid bunch grape cultivar Blanc du Bois in Texas

Authors: Olufemi J. Alabi, Sheila McBride, David N. Appel, Maher Al Rwahnih, Fran M. Pontasch

Published in: Archives of Virology | Issue 6/2019

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Abstract

A novel ssRNA (+) virus with molecular properties typical of members of the genus Vitivirus (family Betaflexiviridae; subfamily Trivirinae) was discovered by high-throughput sequencing in samples of the American hybrid bunch grape cultivar Blanc du Bois in Texas. The results were independently confirmed by Sanger sequencing of the virus isolate, whose genome length is 7,387 nt, excluding the polyA tail. The genome sequence contains five ORFs that are homologous and phylogenetically related to ORFs of grapevine-infecting vitiviruses. The name “grapevine virus M” is proposed for this new virus, whose sequence divergence exceeds the current ICTV species demarcation threshold for the genus Vitivirus.
Literature
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Minafra A, Mawassi M, Goszczynski D, Saldarelli P (2017) Grapevine vitiviruses. In: Meng B, Martelli G, Golino D, Fuchs M (eds) Grapevine viruses: molecular biology, diagnostics and management. Springer, Cham, pp 229–256CrossRef
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Tzanetakis IE, Postman JD, Martin RR (2007) Identification, detection and transmission of a new vitivirus from Mentha. Arch Virol 152:2027–2033CrossRefPubMed
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Bem F, Murant AF (1979) Transmission and differentiation of six viruses infecting hogweed (Heracleum sphondylium) in Scotland. Ann Appl Biol 92:237–242CrossRef
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Al Rwahnih M, Alabi OJ, Westrick NM, Golino D, Rowhani A (2017) Description of a novel monopartite geminivirus and its defective subviral genome in grapevine. Phytopathology 107:240–251CrossRefPubMed
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Al Rwahnih M, Rowhani A, Westrick N, Stevens K, Diaz-Lara A, Trouillas F, Preece J, Kallsen CE, Farrar K, Golino DA (2018) Discovery of viruses and virus-like pathogens in pistachio using high-throughput sequencing. Plant Dis 102:1419–1425CrossRefPubMed
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Candresse T, Theil S, Faure C, Marais A (2017) Determination of the complete genomic sequence of grapevine virus H, a novel vitivirus infecting grapevine. Arch Virol 163:277–280CrossRefPubMed
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Metadata
Title
Grapevine virus M, a novel vitivirus discovered in the American hybrid bunch grape cultivar Blanc du Bois in Texas
Authors
Olufemi J. Alabi
Sheila McBride
David N. Appel
Maher Al Rwahnih
Fran M. Pontasch
Publication date
01-06-2019
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 6/2019
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-019-04252-7

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