Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

Keynote webinar | Spotlight on medication adherence

LIVE: Thursday 27th June 2024, 18:00-19:30 (CEST)
Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 7/2011

01-07-2011 | Annotated Sequence Record

Genetic variability of the coat protein sequence of pea seed-borne mosaic virus isolates and the current relationship between phylogenetic placement and resistance groups

Authors: S. J. Wylie, B. A. Coutts, R. A. C. Jones

Published in: Archives of Virology | Issue 7/2011

Login to get access

Abstract

Nucleotide sequences of complete or partial coat protein (CP) genes were determined for 11 isolates of pea seed-borne mosaic virus (PSbMV) from Australia and one from China, and compared with known sequences of 20 other isolates. On phylogenetic analysis, the isolates from Australia and China grouped into 2 of 3 clades. Clade A contained three sub-clades (Ai, Aii and Aiii), Australian isolates were in Ai or Aiii, and the Chinese isolate in Aii. Clade A contained isolates in pathotypes P-1, P-2 and U-2; clade B, one isolate in P-2; and clade C, only isolates in P-4.
Literature
1.
Alconero R, Provvidenti R, Gonsalves D (1986) Three pea seed-borne mosaic virus pathotypes from pea and lentil germplasm. Plant Dis 70:783–786CrossRef
2.
Ali A, Randles JW (1997) Early season survey of pea viruses in Pakistan and the detection of two new pathotypes of pea seed-borne mosaic potyvirus. Plant Dis 81:343–347CrossRef
3.
Ali A, Randles JW (1998) The effects of two pathotypes of pea seed-borne mosaic virus on the morphology and yield of pea. Austral Plant Pathol 27:223–226
4.
Ali A, Randles JW (2001) Genomic heterogeneity in Pea seed-borne mosaic virus isolates from Pakistan, the centre of diversity of the host species, Pisum sativum. Arch Virol 146:1855–1870PubMedCrossRef
5.
Andrejeva J, Puur U, Merits A, Rabenstein F, Jarvekulg L, Valkonen JPT (1999) Potyvirus helper component-proteinase and coat protein (CP) have coordinated functions in virus–host interactions and the same CP motif affects virus transmission and accumulation. J Gen Virol 80:1133–1139PubMed
6.
Coutts BA, Prince RT, Jones RAC (2009) Quantifying the effects of seed-borne virus inoculum on virus spread, yield losses and seed infection in the Pea seed-borne mosaic virus—field pea pathosystem. Phytopathology 10:1156–1167CrossRef
7.
Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirids by RT-PCR. J Virol Meth 63:9–16CrossRef
8.
Hampton RO, Mink GI (1975) Pea seed-borne mosaic virus. Descriptions of Plant viruses No. 147. Commonwealth Mycological Institute, UK
9.
Hjulsager CK, Søgaard Lund O, Johansen IE (2002) A new pathotype of pea seedborne mosaic virus explained by properties of the p3-6k1- and viral genome-linked protein (VPg)-coding regions. Mol Plant Microbe Interact 15:169–171PubMedCrossRef
10.
Johansen IE, Keller KE, Dougherty WG, Hampton RO (1996) Biological and molecular properties of a pathotype P-1 and a pathotype P-4 isolate of Pea seed-borne mosaic virus. J Gen Virol 77:1329–1333PubMedCrossRef
11.
Kasimor K, Baggett JR, Hampton RO (1997) Pea cultivar susceptibility and inheritance of resistance to the lentil strain of pea seed-borne mosaic virus. J Am Soc Hortic Sci 122:325–328
12.
Munro D (1978) Pea seed-borne mosaic virus in quarantine. Aust Plant Pathol Soc Newsl 7:10
13.
Musil M (1966) Uber das Vorkommen des Virus des Blattrollens der Erbse in der Slowakei (Vorläufige Mitteilung). Biologia (Bratislava) 21:133–138
14.
Provvidenti R, Alconero R (1988) Inheritance of resistance to a lentil strain of pea seed-borne mosaic virus in Pisum sativum. J Heredity 79:45–47
15.
Provvidenti R, Alconero R (1988) Inheritance of resistance to a third pathotype of pea seed-borne mosaic virus in Pisum sativum. J Heredity 79:7677
16.
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599PubMedCrossRef
17.
Wylie SJ, Nouri S, Coutts BA, Jones MGK (2010) Narcissus late season yellows virus and Vallota speciosa virus found infecting domestic and wild populations of Narcissus species in Australia. Arch Virol 155:1171–1174PubMedCrossRef
Metadata
Title
Genetic variability of the coat protein sequence of pea seed-borne mosaic virus isolates and the current relationship between phylogenetic placement and resistance groups
Authors
S. J. Wylie
B. A. Coutts
R. A. C. Jones
Publication date
01-07-2011
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 7/2011
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-011-1002-3

Other articles of this Issue 7/2011

Archives of Virology 7/2011 Go to the issue

Original Article

Genetic heterogeneity among bovine leukemia viruses in Japan and their relationship to leukemogenicity

Original Article

Prediction of conserved microRNAs from skin and mucosal human papillomaviruses

Original Article

Identification of a phylogenetically distinct orthobunyavirus from group C

Brief Report

Detection of hantaviruses in Brazilian rodents by SYBR-Green-based real-time RT-PCR

Original Article

Attenuation of nitric oxide bioavailability in porcine aortic endothelial cells by classical swine fever virus

Original Article

Using small RNA sequences to diagnose, sequence, and investigate the infectivity characteristics of vegetable-infecting viruses
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Reserve your place

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine
Image Credits