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Archives of Virology
Published in: Archives of Virology 6/2015

01-06-2015 | Brief Report

Genetic variability of blueberry scorch virus isolates from highbush blueberry in New York State

Authors: Elżbieta Kalinowska, Patricia Marsella-Herrick, Marc Fuchs

Published in: Archives of Virology | Issue 6/2015

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Abstract

The genetic variability of blueberry scorch virus (BlScV) isolates from New York was determined within a portion of the RNA-dependent RNA polymerase gene and the triple gene block and coat protein (CP) genes. Phylogenetic analysis of 19 New York isolates and other isolates for which sequence information is available in GenBank revealed two distinct clades, regardless of the coding region analyzed, and limited variability within (0.029 ± 0.007) and between (0.183 ± 0.032) phylogroups. Recombination events were identified in the CP gene of three New York isolates, and codons of the five BlScV genes characterized were found to be under neutral or negative selective pressure.
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Metadata
Title
Genetic variability of blueberry scorch virus isolates from highbush blueberry in New York State
Authors
Elżbieta Kalinowska
Patricia Marsella-Herrick
Marc Fuchs
Publication date
01-06-2015
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 6/2015
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-015-2402-6

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