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Archives of Virology
Published in: Archives of Virology 8/2018

01-08-2018 | Annotated Sequence Record

Full genotype constellations of six feline Rotavirus A strains isolated in Japan in the 1990s including a rare A15 NSP1 genotype

Authors: Toyoko Nakagomi, Chantal Ama Agbemabiese, Osamu Nakagomi

Published in: Archives of Virology | Issue 8/2018

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Abstract

Full genome sequencing of six feline Rotavirus A (RVA) strains isolated in Japan in the 1990s revealed three genotype constellations, one of which had a unique constellation of G3-P[3]-I3-R3-C3-M3-A15-N3-T3-E3-H6. Genotype A15, carried by RVA/Cat-tc/JPN/FRV348/1994/G3P[3], is a rare NSP1 genotype, and only one human and one canine RVA strains have thus far been reported to carry this genotype. The other three G3P[3] strains (FRV72, FRV73, and FRV303) possessed a constellation of I3-R3-C2-M3-A9-N2-T3-E3-H6, whereas two G3P[9] strains (FRV317 and FRV384) possessed a constellation of I3-R3-C3-M3-A3-N3-T3-E3-H3.
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Literature
1.
Estes MK, Greenberg HB (2013) Rotaviruses. In: Knipe DM, Howley PM (eds) Fields virology, 6th edn. Lippincott Williams & Wilkins, Philadelphia, pp 1347–1401
2.
Matthijnssens J, Ciarlet M, Mcdonald SM, Attoui H, Bányai K, Brister JR, Buesa J, Esona MD, Estes MK, Gentsch JR, Iturriza-Gómara M, Johne R, Kirkwood CD, Martella V, Mertens PP, Nakagomi O, Parreňo V, Rahman M, Ruggeri FM, Saif LJ, Santos N, Steyer A, Taniguchi K, Patton JT, Desselberger U, Van Ranst M (2011) Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG). Arch Virol 156:1397–1413CrossRefPubMedPubMedCentral
3.
Matthijnssens Matthijnssens J, De Grazia S, Piessens J, Heylen E, Zeller M, Giammanco GM, Bányai K, Buonavoglia C, Ciarlet M, Martella V, Van Ranst M (2011) Multiple reassortment and interspecies transmission events contribute to the diversity of feline, canine and feline/canine-like human group A rotavirus strains. Infect Genet Evol 11:1396–1406CrossRefPubMed
4.
Gauchan P, Sasaki E, Nakagomi T, Do LP, Doan YH, Mochizuki M, Nakagomi O (2015) Whole genotype constellation of prototype feline rotavirus strains FRV-1 and FRV64 and their phylogenetic relationships with feline-like human rotavirus strains. J Gen Virol 96:338–350CrossRefPubMed
5.
Kaneko M, Mochizuki M, Nakagomi O, Nakagomi T (2016) Whole genome characterization of a G6P[5] rotavirus A strain isolated from a stray cat in Japan. Vet Microbiol 188:25–33CrossRefPubMed
6.
Mochizuki M, Nakagomi O, Shibata S (1992) Hemagglutinin activity of two distinct genogroups of feline and canine rotavirus strains. Arch Virol 122:373–381CrossRefPubMed
7.
Mochizuki M, Nakagomi T, Nakagomi O (1997) Isolation from diarrheal and asymptomatic kittens of three rotavirus strains that belong to the AU-1 genogroup of human rotaviruses. J Clin Microbiol 35:1272–1275PubMedPubMedCentral
8.
Agbemabiese CA, Nakagomi T, Nguyen MQ, Gauchan P, Nakagomi O (2017) Reassortant DS-1-like G1P[4] Rotavirus A strains generated from co-circulating strains in Vietnam, 2012/2013. Microbiol Immunol 61:328–336CrossRefPubMed
9.
Maes P, Matthijnssens J, Rahman M, Van Ranst M (2009) RotaC: a web-based tool for the complete genome classification of group A rotaviruses. BMC Microbiol 9:238CrossRefPubMedPubMedCentral
10.
Papp H, Mihalov-Kovács E, Dóró R, Marton S, Farkas SL, Giammanco GM, De Grazia S, Martella V, Bányai K (2015) Full-genome sequencing of a Hungarian canine G3P[3] Rotavirus A strain reveals high genetic relatedness with a historic Italian human strain. Virus Genes 50:310–315CrossRefPubMed
Metadata
Title
Full genotype constellations of six feline Rotavirus A strains isolated in Japan in the 1990s including a rare A15 NSP1 genotype
Authors
Toyoko Nakagomi
Chantal Ama Agbemabiese
Osamu Nakagomi
Publication date
01-08-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 8/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3835-5

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