Skip to main content
Top
Published in: Malaria Journal 1/2015

Open Access 01-12-2015 | Research

Forecasting malaria in a highly endemic country using environmental and clinical predictors

Authors: Kate Zinszer, Ruth Kigozi, Katia Charland, Grant Dorsey, Timothy F Brewer, John S Brownstein, Moses R Kamya, David L Buckeridge

Published in: Malaria Journal | Issue 1/2015

Login to get access

Abstract

Background

Malaria thrives in poor tropical and subtropical countries where local resources are limited. Accurate disease forecasts can provide public and clinical health services with the information needed to implement targeted approaches for malaria control that make effective use of limited resources. The objective of this study was to determine the relevance of environmental and clinical predictors of malaria across different settings in Uganda.

Methods

Forecasting models were based on health facility data collected by the Uganda Malaria Surveillance Project and satellite-derived rainfall, temperature, and vegetation estimates from 2006 to 2013. Facility-specific forecasting models of confirmed malaria were developed using multivariate autoregressive integrated moving average models and produced weekly forecast horizons over a 52-week forecasting period.

Results

The model with the most accurate forecasts varied by site and by forecast horizon. Clinical predictors were retained in the models with the highest predictive power for all facility sites. The average error over the 52 forecasting horizons ranged from 26 to 128% whereas the cumulative burden forecast error ranged from 2 to 22%.

Conclusions

Clinical data, such as drug treatment, could be used to improve the accuracy of malaria predictions in endemic settings when coupled with environmental predictors. Further exploration of malaria forecasting is necessary to improve its accuracy and value in practice, including examining other environmental and intervention predictors, including insecticide-treated nets.
Appendix
Available only for authorised users
Literature
1.
go back to reference Christophers SR (1911) Epidemic malaria of the Punjab: with a note of a method of predicting epidemic years. Trans Committee Stud Malaria India 2:17–26 Christophers SR (1911) Epidemic malaria of the Punjab: with a note of a method of predicting epidemic years. Trans Committee Stud Malaria India 2:17–26
3.
4.
go back to reference WHO (2014) World malaria report 2014. World Health Organization, Geneva WHO (2014) World malaria report 2014. World Health Organization, Geneva
5.
6.
go back to reference Abeku TA, De Vlas SJ, Borsboom GJJM, Tadege A, Gebreyesus Y, Gebreyohannes H et al (2004) Effects of meteorological factors on epidemic malaria in Ethiopia: a statistical modelling approach based on theoretical reasoning. Parasitology 128:585–593PubMedCrossRef Abeku TA, De Vlas SJ, Borsboom GJJM, Tadege A, Gebreyesus Y, Gebreyohannes H et al (2004) Effects of meteorological factors on epidemic malaria in Ethiopia: a statistical modelling approach based on theoretical reasoning. Parasitology 128:585–593PubMedCrossRef
7.
go back to reference Gomez-Elipe A, Otero A, van Herp M, Aguirre-Jaime A (2007) Forecasting malaria incidence based on monthly case reports and environmental factors in Karuzi, Burundi, 1997–2003. Malar J 6:129PubMedCentralPubMedCrossRef Gomez-Elipe A, Otero A, van Herp M, Aguirre-Jaime A (2007) Forecasting malaria incidence based on monthly case reports and environmental factors in Karuzi, Burundi, 1997–2003. Malar J 6:129PubMedCentralPubMedCrossRef
8.
go back to reference Medina DC, Findley SE, Guindo B, Doumbia S (2007) Forecasting non-stationary diarrhea, acute respiratory infection, and malaria time-series in Niono, Mali. PLoS One 2:e1181PubMedCentralPubMedCrossRef Medina DC, Findley SE, Guindo B, Doumbia S (2007) Forecasting non-stationary diarrhea, acute respiratory infection, and malaria time-series in Niono, Mali. PLoS One 2:e1181PubMedCentralPubMedCrossRef
9.
go back to reference Zinszer K, Verma AD, Charland K, Brewer TF, Brownstein JS, Sun Z et al (2012) A scoping review of malaria forecasting: past work and future directions. BMJ Open 2:e001992PubMedCentralPubMedCrossRef Zinszer K, Verma AD, Charland K, Brewer TF, Brownstein JS, Sun Z et al (2012) A scoping review of malaria forecasting: past work and future directions. BMJ Open 2:e001992PubMedCentralPubMedCrossRef
10.
go back to reference Dorsey G, Staedke S, Clark TD, Njama-Meya D, Nzarubara B, Maiteki-Sebuguzi C et al (2007) Combination therapy for uncomplicated falciparum malaria in Ugandan children. JAMA 297:2210–2219PubMedCrossRef Dorsey G, Staedke S, Clark TD, Njama-Meya D, Nzarubara B, Maiteki-Sebuguzi C et al (2007) Combination therapy for uncomplicated falciparum malaria in Ugandan children. JAMA 297:2210–2219PubMedCrossRef
11.
go back to reference Dorsey G, Gasasira AF, Machekano R, Kamya MR, Staedke SG, Hubbard A (2004) The impact of age, temperature, and parasite density on treatment outcomes from antimalarial clinical trials in Kampala, Uganda. Am J Trop Med Hyg 71:531–536PubMed Dorsey G, Gasasira AF, Machekano R, Kamya MR, Staedke SG, Hubbard A (2004) The impact of age, temperature, and parasite density on treatment outcomes from antimalarial clinical trials in Kampala, Uganda. Am J Trop Med Hyg 71:531–536PubMed
12.
go back to reference Jagannathan P, Muhindo MK, Kakuru A, Arinaitwe E, Greenhouse B, Tappero J et al (2012) Increasing incidence of malaria in children despite insecticide-treated bed nets and prompt anti-malarial therapy in Tororo, Uganda. Malar J 11:435PubMedCentralPubMedCrossRef Jagannathan P, Muhindo MK, Kakuru A, Arinaitwe E, Greenhouse B, Tappero J et al (2012) Increasing incidence of malaria in children despite insecticide-treated bed nets and prompt anti-malarial therapy in Tororo, Uganda. Malar J 11:435PubMedCentralPubMedCrossRef
13.
go back to reference Malaria Control Programme (2005) Uganda malaria control strategic plan 2005/6–2009/10. Ministry of Health, Kampala Malaria Control Programme (2005) Uganda malaria control strategic plan 2005/6–2009/10. Ministry of Health, Kampala
14.
go back to reference Uganda Bureau of Statistics (UBOS), ICF Macro (2010) Uganda malaria indicator survey 2009. UBOS and ICF Macro 2010, Calverton, Maryland Uganda Bureau of Statistics (UBOS), ICF Macro (2010) Uganda malaria indicator survey 2009. UBOS and ICF Macro 2010, Calverton, Maryland
16.
go back to reference Sserwanga A, Harris JC, Kigozi R, Menon M, Bukirwa H, Gasasira A et al (2011) Improved malaria case management through the implementation of a health facility-based sentinel site surveillance system in Uganda. PLoS One 6:e16316PubMedCentralPubMedCrossRef Sserwanga A, Harris JC, Kigozi R, Menon M, Bukirwa H, Gasasira A et al (2011) Improved malaria case management through the implementation of a health facility-based sentinel site surveillance system in Uganda. PLoS One 6:e16316PubMedCentralPubMedCrossRef
17.
go back to reference Zinszer K, Charland K, Kigozi R, Dorsey G, Kamya MR, Buckeridge DL (2014) Determining health-care facility catchment areas in Uganda using data on malaria-related visits. Bull World Health Organ 92:178–186PubMedCentralPubMedCrossRef Zinszer K, Charland K, Kigozi R, Dorsey G, Kamya MR, Buckeridge DL (2014) Determining health-care facility catchment areas in Uganda using data on malaria-related visits. Bull World Health Organ 92:178–186PubMedCentralPubMedCrossRef
18.
go back to reference Sears D, Kigozi R, Mpimbaza A, Kakeeto S, Sserwanga A, Staedke SG et al (2013) Anti-malarial prescription practices among outpatients with laboratory-confirmed malaria in the setting of a health facility-based sentinel site surveillance system in Uganda. Malar J 12:252PubMedCentralPubMedCrossRef Sears D, Kigozi R, Mpimbaza A, Kakeeto S, Sserwanga A, Staedke SG et al (2013) Anti-malarial prescription practices among outpatients with laboratory-confirmed malaria in the setting of a health facility-based sentinel site surveillance system in Uganda. Malar J 12:252PubMedCentralPubMedCrossRef
20.
go back to reference Shumway RH, Stoffer DS (2006) Time series analysis and its applications: with R examples, 2nd edn. Springer, New York Shumway RH, Stoffer DS (2006) Time series analysis and its applications: with R examples, 2nd edn. Springer, New York
21.
go back to reference Chatfield C (2004) The analysis of time series: an introduction, 6th edn. Chapman & Hall, London Chatfield C (2004) The analysis of time series: an introduction, 6th edn. Chapman & Hall, London
22.
go back to reference Hyndman RJ, Koehler AB (2006) Another look at measures of forecast accuracy. Int J Forecast 22:679–688CrossRef Hyndman RJ, Koehler AB (2006) Another look at measures of forecast accuracy. Int J Forecast 22:679–688CrossRef
24.
go back to reference Moore SM, Monaghan A, Griffith KS, Apangu T, Mead PS, Eisen RJ (2012) Improvement of disease prediction and modeling through the use of meteorological ensembles: human plague in Uganda. PLoS ONE 7:e44431PubMedCentralPubMedCrossRef Moore SM, Monaghan A, Griffith KS, Apangu T, Mead PS, Eisen RJ (2012) Improvement of disease prediction and modeling through the use of meteorological ensembles: human plague in Uganda. PLoS ONE 7:e44431PubMedCentralPubMedCrossRef
25.
go back to reference Trigo I, Monteiro IT, Olesen F, Kabsch E (2008) An assessment of remotely sensed land surface temperature. J Geophys Res Atmos 113:nD17CrossRef Trigo I, Monteiro IT, Olesen F, Kabsch E (2008) An assessment of remotely sensed land surface temperature. J Geophys Res Atmos 113:nD17CrossRef
26.
go back to reference Scharlemann JPW, Benz D, Hay SI, Purse BV, Tatem AJ, Wint GRW et al (2008) Global data for ecology and epidemiology: a novel algorithm for temporal Fourier processing MODIS data. PLoS One 3:e1408PubMedCentralPubMedCrossRef Scharlemann JPW, Benz D, Hay SI, Purse BV, Tatem AJ, Wint GRW et al (2008) Global data for ecology and epidemiology: a novel algorithm for temporal Fourier processing MODIS data. PLoS One 3:e1408PubMedCentralPubMedCrossRef
27.
go back to reference Huete AR (2012) Vegetation indices, remote sensing and forest monitoring. Geogr Compass 6:513–532CrossRef Huete AR (2012) Vegetation indices, remote sensing and forest monitoring. Geogr Compass 6:513–532CrossRef
28.
go back to reference Nicholson SE, Some B, McCollum J, Nelkin E, Klotter D, Berte Y et al (2003) Validation of TRMM and other rainfall estimates with a high-density gauge dataset for West Africa. Part II: validation of TRMM rainfall products. J Appl Meteorol 42:1355–1368CrossRef Nicholson SE, Some B, McCollum J, Nelkin E, Klotter D, Berte Y et al (2003) Validation of TRMM and other rainfall estimates with a high-density gauge dataset for West Africa. Part II: validation of TRMM rainfall products. J Appl Meteorol 42:1355–1368CrossRef
29.
go back to reference Adeyewa ZD, Nakamura K (2003) Validation of TRMM radar rainfall data over major climatic regions in Africa. J Appl Meteorol 42:331–347CrossRef Adeyewa ZD, Nakamura K (2003) Validation of TRMM radar rainfall data over major climatic regions in Africa. J Appl Meteorol 42:331–347CrossRef
30.
go back to reference Kigozi R, Baxi SM, Gasasira A, Sserwanga A, Kakeeto S, Nasr SR et al (2012) Indoor residual spraying of insecticide and malaria morbidity in a high transmission intensity area of Uganda. PLoS One 7:e42857PubMedCentralPubMedCrossRef Kigozi R, Baxi SM, Gasasira A, Sserwanga A, Kakeeto S, Nasr SR et al (2012) Indoor residual spraying of insecticide and malaria morbidity in a high transmission intensity area of Uganda. PLoS One 7:e42857PubMedCentralPubMedCrossRef
Metadata
Title
Forecasting malaria in a highly endemic country using environmental and clinical predictors
Authors
Kate Zinszer
Ruth Kigozi
Katia Charland
Grant Dorsey
Timothy F Brewer
John S Brownstein
Moses R Kamya
David L Buckeridge
Publication date
01-12-2015
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2015
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/s12936-015-0758-4

Other articles of this Issue 1/2015

Malaria Journal 1/2015 Go to the issue
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.