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Published in: Molecular and Cellular Pediatrics 1/2021

Open Access 01-12-2021 | Diseases of the neuromuscular synapses and muscles | Case Study

Identification of a novel MICU1 nonsense variant causes myopathy with extrapyramidal signs in an Iranian consanguineous family

Authors: Fatemeh Bitarafan, Mehrnoosh Khodaeian, Elham Amjadi Sardehaei, Fatemeh Zahra Darvishi, Navid Almadani, Yalda Nilipour, Masoud Garshasbi

Published in: Molecular and Cellular Pediatrics | Issue 1/2021

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Abstract

Background

Ca2+ as a universal second messenger regulates basic biological functions including cell cycle, cell proliferation, cell differentiation, and cell death. Lack of the protein mitochondrial calcium uptake1 (MICU1), which has been regarded as a gatekeeper of Ca ions, leads to the abnormal mitochondrial Ca2+ handling, excessive production of reactive oxygen species (ROS), and increased cell death. Mutations in MICU1 gene causes a very rare neuromuscular disease, myopathy with extrapyramidal signs (MPXPS), due to primary alterations in mitochondrial calcium signaling which demonstrates the key role of mitochondrial Ca2+ uptake. To date, 13 variants have been reported in MICU1 gene in 44 patients presented with the vast spectrum of symptoms.

Case presentation

Here, we report a 44-year-old Iranian patient presented with learning disability, muscle weakness, easy fatigability, reduced tendon reflexes, ataxia, gait disturbance, elevated hepatic transaminases, elevated serum creatine kinase (CK), and elevated lactate dehydrogenase (LDH). We identified a novel nonsense variant c.385C>T; p.(R129*) in MICU1 gene by whole exome sequencing (WES) and segregation analysis.

Conclusions

Our finding along with previous studies provides more evidence on the clinical presentation of the disease caused by pathogenic mutations in MICU1. Finding more variants and expanding the spectrum of the disease increases the diagnostic rate of molecular testing in screening of this kind of diseases and in turn improves the quality of counseling for at risk couples and helps them to minimize the risks of having affected children.
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Literature
1.
go back to reference Logan CV, Szabadkai G, Sharpe JA, Parry DA, Torelli S, Childs AM et al (2014) Loss-of-function mutations in MICU1 cause a brain and muscle disorder linked to primary alterations in mitochondrial calcium signaling. Nat Genet. 46(2):188–193 Available from: https://doi.org/10.1038/ng.2851 Logan CV, Szabadkai G, Sharpe JA, Parry DA, Torelli S, Childs AM et al (2014) Loss-of-function mutations in MICU1 cause a brain and muscle disorder linked to primary alterations in mitochondrial calcium signaling. Nat Genet. 46(2):188–193 Available from: https://​doi.​org/​10.​1038/​ng.​2851
9.
13.
go back to reference Madreiter-Sokolowski CT, Klec C, Parichatikanond W, Stryeck S, Gottschalk B, Pulido S, Rost R, Eroglu E, Hofmann NA, Bondarenko AI, Madl T, Waldeck-Weiermair M, Malli R, Graier WF (2016) PRMT1-mediated methylation of MICU1 determines the UCP2/3 dependency of mitochondrial Ca2+ uptake in immortalized cells. Nat Commun. 7(1):12897 Available from: https://doi.org/10.1038/ncomms12897 Madreiter-Sokolowski CT, Klec C, Parichatikanond W, Stryeck S, Gottschalk B, Pulido S, Rost R, Eroglu E, Hofmann NA, Bondarenko AI, Madl T, Waldeck-Weiermair M, Malli R, Graier WF (2016) PRMT1-mediated methylation of MICU1 determines the UCP2/3 dependency of mitochondrial Ca2+ uptake in immortalized cells. Nat Commun. 7(1):12897 Available from: https://​doi.​org/​10.​1038/​ncomms12897
14.
go back to reference Csordás G, Golenár T, Seifert EL, Kamer KJ, Sancak Y, Perocchi F, Moffat C, Weaver D, Perez SF, Bogorad R, Koteliansky V, Adijanto J, Mootha VK, Hajnóczky G (2013) MICU1 controls both the threshold and cooperative activation of the mitochondrial Ca2+ uniporter. Cell Metab. 17(6):976–987. https://doi.org/10.1016/j.cmet.2013.04.020 Csordás G, Golenár T, Seifert EL, Kamer KJ, Sancak Y, Perocchi F, Moffat C, Weaver D, Perez SF, Bogorad R, Koteliansky V, Adijanto J, Mootha VK, Hajnóczky G (2013) MICU1 controls both the threshold and cooperative activation of the mitochondrial Ca2+ uniporter. Cell Metab. 17(6):976–987. https://​doi.​org/​10.​1016/​j.​cmet.​2013.​04.​020
20.
go back to reference Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, Weber RJ, Haussler D, Kent WJ, University of California Santa Cruz (2003) The UCSC Genome Browser Database. Nucleic Acids Res. 31(1):51–54. https://doi.org/10.1093/nar/gkg129 Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, Weber RJ, Haussler D, Kent WJ, University of California Santa Cruz (2003) The UCSC Genome Browser Database. Nucleic Acids Res. 31(1):51–54. https://​doi.​org/​10.​1093/​nar/​gkg129
21.
go back to reference Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J et al (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 17(5):405–424. https://doi.org/10.1038/gim.2015.30 Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J et al (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 17(5):405–424. https://​doi.​org/​10.​1038/​gim.​2015.​30
24.
go back to reference Lewis-Smith D, Kamer KJ, Griffin H, Childs AM, Pysden K, Titov D, Duff J, Pyle A, Taylor RW, Yu-Wai-Man P, Ramesh V, Horvath R, Mootha VK, Chinnery PF (2016) Homozygous deletion in MICU1 presenting with fatigue and lethargy in childhood. Neurol Genet. 2(2):1–6. https://doi.org/10.1212/NXG.0000000000000059 Lewis-Smith D, Kamer KJ, Griffin H, Childs AM, Pysden K, Titov D, Duff J, Pyle A, Taylor RW, Yu-Wai-Man P, Ramesh V, Horvath R, Mootha VK, Chinnery PF (2016) Homozygous deletion in MICU1 presenting with fatigue and lethargy in childhood. Neurol Genet. 2(2):1–6. https://​doi.​org/​10.​1212/​NXG.​0000000000000059​
27.
go back to reference Musa S, Eyaid W, Kamer K (2018) Research report a Middle Eastern Founder mutation expands the genotypic and phenotypic spectrum of mitochondrial MICU1 deficiency : a report of 13 patients. https://doi.org/10.1007/8904 Musa S, Eyaid W, Kamer K (2018) Research report a Middle Eastern Founder mutation expands the genotypic and phenotypic spectrum of mitochondrial MICU1 deficiency : a report of 13 patients. https://​doi.​org/​10.​1007/​8904
29.
go back to reference Wilton KM, Morales-rosado JA, Selcen D, Klee EW, Morava MHE (2020) Developmental brain abnormalities and acute encephalopathy in a patient with myopathy with extrapyramidal signs secondary to pathogenic variants in MICU1. (February):22–28. https://doi.org/10.1002/jmd2.12114 Wilton KM, Morales-rosado JA, Selcen D, Klee EW, Morava MHE (2020) Developmental brain abnormalities and acute encephalopathy in a patient with myopathy with extrapyramidal signs secondary to pathogenic variants in MICU1. (February):22–28. https://​doi.​org/​10.​1002/​jmd2.​12114
31.
go back to reference Chérot E, Keren B, Dubourg C, Carré W, Fradin M, Lavillaureix A, Afenjar A, Burglen L, Whalen S, Charles P, Marey I, Heide S, Jacquette A, Heron D, Doummar D, Rodriguez D, Billette de Villemeur T, Moutard ML, Guët A, Xavier J, Périsse D, Cohen D, Demurger F, Quélin C, Depienne C, Odent S, Nava C, David V, Pasquier L, Mignot C (2018) Using medical exome sequencing to identify the causes of neurodevelopmental disorders: experience of 2 clinical units and 216 patients. Clin Genet. 93(3):567–576. Available from:. https://doi.org/10.1111/cge.13102 Chérot E, Keren B, Dubourg C, Carré W, Fradin M, Lavillaureix A, Afenjar A, Burglen L, Whalen S, Charles P, Marey I, Heide S, Jacquette A, Heron D, Doummar D, Rodriguez D, Billette de Villemeur T, Moutard ML, Guët A, Xavier J, Périsse D, Cohen D, Demurger F, Quélin C, Depienne C, Odent S, Nava C, David V, Pasquier L, Mignot C (2018) Using medical exome sequencing to identify the causes of neurodevelopmental disorders: experience of 2 clinical units and 216 patients. Clin Genet. 93(3):567–576. Available from:. https://​doi.​org/​10.​1111/​cge.​13102
32.
go back to reference Mojbafan M, Nojehdeh ST, Rahiminejad F, Nilipour Y, Tonekaboni SH, Zeinali S (2020) Reporting a rare form of myopathy, myopathy with extrapyramidal signs, in an Iranian family using next generation sequencing: a case report. BMC Med Genet. 21(1):4–9. https://doi.org/10.1186/s12881-020-01016-y Mojbafan M, Nojehdeh ST, Rahiminejad F, Nilipour Y, Tonekaboni SH, Zeinali S (2020) Reporting a rare form of myopathy, myopathy with extrapyramidal signs, in an Iranian family using next generation sequencing: a case report. BMC Med Genet. 21(1):4–9. https://​doi.​org/​10.​1186/​s12881-020-01016-y
Metadata
Title
Identification of a novel MICU1 nonsense variant causes myopathy with extrapyramidal signs in an Iranian consanguineous family
Authors
Fatemeh Bitarafan
Mehrnoosh Khodaeian
Elham Amjadi Sardehaei
Fatemeh Zahra Darvishi
Navid Almadani
Yalda Nilipour
Masoud Garshasbi
Publication date
01-12-2021
Publisher
Springer Berlin Heidelberg
Published in
Molecular and Cellular Pediatrics / Issue 1/2021
Electronic ISSN: 2194-7791
DOI
https://doi.org/10.1186/s40348-021-00116-w

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