Skip to main content
Top
Published in: Virology Journal 1/2009

Open Access 01-12-2009 | Research

Development of TaqMan® MGB fluorescent real-time PCR assay for the detection of anatid herpesvirus 1

Authors: Yufei Guo, Anchun Cheng, Mingshu Wang, Chanjuan Shen, Renyong Jia, Shun Chen, Na Zhang

Published in: Virology Journal | Issue 1/2009

Login to get access

Abstract

Background

Anatid herpesvirus 1 (AHV-1) is an alphaherpesvirus associated with latent infection and mortality in ducks and geese and is currently affecting the world-wide waterfowl production severely. Here we describe a fluorescent quantitative real-time PCR (FQ-PCR) method developed for fast measurement of AHV-1 DNA based on TaqMan MGB technology.

Results

The detection limit of the assay was 1 × 101 standard DNA copies, with a sensitivity of 2 logs higher than that of the conventional gel-based PCR assay targeting the same gene. The real-time PCR was reproducible, as shown by satisfactory low intra-assay and inter-assay coefficients of variation.

Conclusion

The high sensitivity, specificity, simplicity and reproducibility of the AHV-1 fluorogenic PCR assay, combined with its wide dynamic range and high throughput, make this method suitable for a broad spectrum of AHV-1 etiologically related application.
Appendix
Available only for authorised users
Literature
1.
go back to reference Sluis W: Ducks are a flavour for the future. World Pou 2004, 20: 41. Sluis W: Ducks are a flavour for the future. World Pou 2004, 20: 41.
2.
go back to reference Sandhu TS, Shawky SA: Duck virus enteritis (Duck plague). In Diseases of Poultry. 11th edition. Edited by: Saif YM, Barnes HJ, Glisson JR. Iowa State Press, Ames; 2003:354-363. Sandhu TS, Shawky SA: Duck virus enteritis (Duck plague). In Diseases of Poultry. 11th edition. Edited by: Saif YM, Barnes HJ, Glisson JR. Iowa State Press, Ames; 2003:354-363.
3.
go back to reference Montgomery RD, Stein G Jr, Novilla MN, Hurley SS, Fink RJ: An outbreak of duck virus enteritis (duck plague) in a captive flock of mixed waterfowl. Avian Dis 1981, 25: 207-213. 10.2307/1589844CrossRefPubMed Montgomery RD, Stein G Jr, Novilla MN, Hurley SS, Fink RJ: An outbreak of duck virus enteritis (duck plague) in a captive flock of mixed waterfowl. Avian Dis 1981, 25: 207-213. 10.2307/1589844CrossRefPubMed
4.
go back to reference Brand CJ, Docherty DE: A survey of north American migratory waterfowl for duck plague (duck virus enteritis) virus. J Wildl Dis 1984, 20: 261-266.CrossRefPubMed Brand CJ, Docherty DE: A survey of north American migratory waterfowl for duck plague (duck virus enteritis) virus. J Wildl Dis 1984, 20: 261-266.CrossRefPubMed
5.
go back to reference Brand CJ, Docherty DE: Post-epizootic surveys of waterfowl for duck plague (duck virus enteritis). Avian Dis 1988, 32: 722-730. 10.2307/1590991CrossRefPubMed Brand CJ, Docherty DE: Post-epizootic surveys of waterfowl for duck plague (duck virus enteritis). Avian Dis 1988, 32: 722-730. 10.2307/1590991CrossRefPubMed
6.
go back to reference Burgess EC, Ossa J, Yuill TM: Duck plague: a carrier state in waterfowl. Avian Dis 1979, 24: 940-949. 10.2307/1589610CrossRef Burgess EC, Ossa J, Yuill TM: Duck plague: a carrier state in waterfowl. Avian Dis 1979, 24: 940-949. 10.2307/1589610CrossRef
7.
8.
go back to reference Fukuchi K, Sudo M, Lee YS, Tanaka A, Nonoyama M: Structure of Marek's disease virus DNA: detailed restriction map. J Virol 1984, 51: 102-109.PubMedCentralPubMed Fukuchi K, Sudo M, Lee YS, Tanaka A, Nonoyama M: Structure of Marek's disease virus DNA: detailed restriction map. J Virol 1984, 51: 102-109.PubMedCentralPubMed
9.
go back to reference Gardner R, Wilkerson J, Johnson JC: Molecular characterization of the DNA of anatid herpesvirus 1. Intervirology 1993, 36: 99-112.PubMed Gardner R, Wilkerson J, Johnson JC: Molecular characterization of the DNA of anatid herpesvirus 1. Intervirology 1993, 36: 99-112.PubMed
10.
go back to reference Chen RW, Piiparinen H, Seppänen M, Koskela P, Sarna S, Lappalainen M: Real-time PCR for detection and quantitation of hepatitis B virus DNA. J Med Virol 2001, 65: 250-256. 10.1002/jmv.2027CrossRefPubMed Chen RW, Piiparinen H, Seppänen M, Koskela P, Sarna S, Lappalainen M: Real-time PCR for detection and quantitation of hepatitis B virus DNA. J Med Virol 2001, 65: 250-256. 10.1002/jmv.2027CrossRefPubMed
11.
go back to reference Jebbink J, Bai X, Rogers BB, Dawson DB, Scheuermann RH, Domiati-Saad R: Development of real-time PCR assays for the quantitative detection of Epstein-Barr virus and cytomegalovirus, comparison of TaqMan probes, and molecular beacons. J Mol Diagn 2003, 5: 15-20.PubMedCentralCrossRefPubMed Jebbink J, Bai X, Rogers BB, Dawson DB, Scheuermann RH, Domiati-Saad R: Development of real-time PCR assays for the quantitative detection of Epstein-Barr virus and cytomegalovirus, comparison of TaqMan probes, and molecular beacons. J Mol Diagn 2003, 5: 15-20.PubMedCentralCrossRefPubMed
12.
go back to reference Weinberger KM, Wiedenmnm E, Böhm S, Jilg W: Sensitive and accurate quantitation of hepatitis B virus DNA using a kinetic fluorescence detection system (TaqMan PCR). J Virol Methods. 2000,85(1-2):75-82. 10.1016/S0166-0934(99)00154-8CrossRefPubMed Weinberger KM, Wiedenmnm E, Böhm S, Jilg W: Sensitive and accurate quantitation of hepatitis B virus DNA using a kinetic fluorescence detection system (TaqMan PCR). J Virol Methods. 2000,85(1-2):75-82. 10.1016/S0166-0934(99)00154-8CrossRefPubMed
13.
go back to reference Watzinger F, Suda M, Preuner S, Baumgartinger R, Ebner K, Baskova L, Niesters HG, Lawitschka A, Lion T: Real-time quantitative PCR assays for detection and monitoring of pathogenic human viruses in immunosuppressed pediatric patients. J Clin Microbiol 2004, 42: 5189-5198. 10.1128/JCM.42.11.5189-5198.2004PubMedCentralCrossRefPubMed Watzinger F, Suda M, Preuner S, Baumgartinger R, Ebner K, Baskova L, Niesters HG, Lawitschka A, Lion T: Real-time quantitative PCR assays for detection and monitoring of pathogenic human viruses in immunosuppressed pediatric patients. J Clin Microbiol 2004, 42: 5189-5198. 10.1128/JCM.42.11.5189-5198.2004PubMedCentralCrossRefPubMed
14.
go back to reference Humar A, Kumar D, Boivin G, Caliendo AM: Cytomegalovirus (CMV) virus load kinetics to predict recurrent disease in solid-organ transplant patients with CMV disease. J Infect Dis 2002, 186: 829-833. 10.1086/342601CrossRefPubMed Humar A, Kumar D, Boivin G, Caliendo AM: Cytomegalovirus (CMV) virus load kinetics to predict recurrent disease in solid-organ transplant patients with CMV disease. J Infect Dis 2002, 186: 829-833. 10.1086/342601CrossRefPubMed
15.
go back to reference Häusler M, Scheithauer S, Ritter K, Kleines M: Molecular diagnosis of Epstein-Barr virus. Expert Rev Mol Diagn 2003, 3: 81-92. 10.1586/14737159.3.1.81CrossRefPubMed Häusler M, Scheithauer S, Ritter K, Kleines M: Molecular diagnosis of Epstein-Barr virus. Expert Rev Mol Diagn 2003, 3: 81-92. 10.1586/14737159.3.1.81CrossRefPubMed
16.
go back to reference Watzinger F, Ebner K, Lion T: Detection and monitoring of virus infections by real-time PCR. Mol Aspects Med 2006, 27: 254-298. 10.1016/j.mam.2005.12.001CrossRefPubMed Watzinger F, Ebner K, Lion T: Detection and monitoring of virus infections by real-time PCR. Mol Aspects Med 2006, 27: 254-298. 10.1016/j.mam.2005.12.001CrossRefPubMed
17.
go back to reference Yang F, Jia W, Yue H, Luo W, Chen X, Xie Y, Zen W, Yang W: Development of quantitative real-time polymerase chain reaction for duck enteritis virus DNA. Avian Dis 2005, 49: 397-400. 10.1637/7338-020305R.1CrossRefPubMed Yang F, Jia W, Yue H, Luo W, Chen X, Xie Y, Zen W, Yang W: Development of quantitative real-time polymerase chain reaction for duck enteritis virus DNA. Avian Dis 2005, 49: 397-400. 10.1637/7338-020305R.1CrossRefPubMed
18.
go back to reference Salguero FJ, Sánchez-Cordón PJ, Núñez A, Gómez-Villamandos JC: Histopathological and ultrastructural changes associated with herpesvirus infection in waterfowl. Avian Pathol 2002, 31: 133-140. 10.1080/03079450120118612CrossRefPubMed Salguero FJ, Sánchez-Cordón PJ, Núñez A, Gómez-Villamandos JC: Histopathological and ultrastructural changes associated with herpesvirus infection in waterfowl. Avian Pathol 2002, 31: 133-140. 10.1080/03079450120118612CrossRefPubMed
19.
go back to reference Islam MR, Nessa J, Halder KM: Detection of duck plague virus antigen in tissues by immunoperoxidase staining. Avian Pathol 1993, 22: 389-393. 10.1080/03079459308418929CrossRefPubMed Islam MR, Nessa J, Halder KM: Detection of duck plague virus antigen in tissues by immunoperoxidase staining. Avian Pathol 1993, 22: 389-393. 10.1080/03079459308418929CrossRefPubMed
20.
go back to reference Wolf K, Burke CN, Quimby MC: Duck viral enteritis: microtiter plate isolation and neutralization test using the duck embryo fibroblast cell line. Avian Dis 1974, 18: 427-434. 10.2307/1589110CrossRefPubMed Wolf K, Burke CN, Quimby MC: Duck viral enteritis: microtiter plate isolation and neutralization test using the duck embryo fibroblast cell line. Avian Dis 1974, 18: 427-434. 10.2307/1589110CrossRefPubMed
21.
go back to reference Guo Y, Cheng A, Wang M, Jia R, Wen M, Zhou W, Chen X: Studies on the growth characteristics of duck enteritis virus CH virulent strain on duck embryo fibroblast. Poult Husb dis control 2007, 4: 2-4. Guo Y, Cheng A, Wang M, Jia R, Wen M, Zhou W, Chen X: Studies on the growth characteristics of duck enteritis virus CH virulent strain on duck embryo fibroblast. Poult Husb dis control 2007, 4: 2-4.
22.
go back to reference Hansen WR, Brown SE, Nashold SW, Knudson DL: Identification of duck plague virus by polymerase chain reaction. Avian Dis 1999,43(1):106-115. 10.2307/1592768CrossRefPubMed Hansen WR, Brown SE, Nashold SW, Knudson DL: Identification of duck plague virus by polymerase chain reaction. Avian Dis 1999,43(1):106-115. 10.2307/1592768CrossRefPubMed
23.
go back to reference Plummer PJ, Alefantis T, Kaplan S, O'Connell P, Shawky S, Schat KA: Detection of duck enteritis virus by polymerase chain reaction. Avian Dis 1998, 42: 554-564. 10.2307/1592682CrossRefPubMed Plummer PJ, Alefantis T, Kaplan S, O'Connell P, Shawky S, Schat KA: Detection of duck enteritis virus by polymerase chain reaction. Avian Dis 1998, 42: 554-564. 10.2307/1592682CrossRefPubMed
24.
go back to reference Pritchard LI, Morrissy C, Phuc KV, Daniels PW, Westbury HA: Development of a polymerase chain reaction to detect Vietnamese isolates of duck virus enteritis. Vet Microbiol 1999, 68: 149-156. 10.1016/S0378-1135(99)00071-1CrossRefPubMed Pritchard LI, Morrissy C, Phuc KV, Daniels PW, Westbury HA: Development of a polymerase chain reaction to detect Vietnamese isolates of duck virus enteritis. Vet Microbiol 1999, 68: 149-156. 10.1016/S0378-1135(99)00071-1CrossRefPubMed
25.
go back to reference Kutyavin IV, Afonina IA, Mills A, Gorn VV, Lukhtanov EA, Belousov ES, Singer MJ, Walburger DK, Lokhov SG, Gall AA, Dempcy R, Reed MW, Meyer RB, Hedgpeth J: 3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures. Nucleic Acids Res 2000, 28: 655-661. 10.1093/nar/28.2.655PubMedCentralCrossRefPubMed Kutyavin IV, Afonina IA, Mills A, Gorn VV, Lukhtanov EA, Belousov ES, Singer MJ, Walburger DK, Lokhov SG, Gall AA, Dempcy R, Reed MW, Meyer RB, Hedgpeth J: 3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures. Nucleic Acids Res 2000, 28: 655-661. 10.1093/nar/28.2.655PubMedCentralCrossRefPubMed
26.
go back to reference Guo Y, Cheng A, Wang M, Jia R, Wen M, Zhou W, Chen X: Establishment and application of quantitative real-time PCR assay for detecting duck viral enteritis virus. Vet Sci chin 2006, 36: 444-448. Guo Y, Cheng A, Wang M, Jia R, Wen M, Zhou W, Chen X: Establishment and application of quantitative real-time PCR assay for detecting duck viral enteritis virus. Vet Sci chin 2006, 36: 444-448.
27.
go back to reference De Vries TJ, Fourkour A, Punt CJA, Locht LTF, Wobbes T, Bosch S, de Rooij MJM, Mensink EJBM, Ruiter DJ, van Muijen GNP: Reproducibility of detection of tyrosine and MART-1 transcripts in the peripheral blood of melanoma patients: a quality control study using real-time quantitative RT-PCR. Br J Cancer 1999, 80: 883-891. 10.1038/sj.bjc.6690436PubMedCentralCrossRefPubMed De Vries TJ, Fourkour A, Punt CJA, Locht LTF, Wobbes T, Bosch S, de Rooij MJM, Mensink EJBM, Ruiter DJ, van Muijen GNP: Reproducibility of detection of tyrosine and MART-1 transcripts in the peripheral blood of melanoma patients: a quality control study using real-time quantitative RT-PCR. Br J Cancer 1999, 80: 883-891. 10.1038/sj.bjc.6690436PubMedCentralCrossRefPubMed
28.
go back to reference Decaro N, Elia G, Campolo M, Desario C, Mari V, Radogna A, Colaianni ML, Cirone F, Tempesta M, Buonavoglia C: Detection of bovine coronavirus using a TaqMan-based real-time RT-PCR assay. J Virol Methods. 2008,151(2):167-171. 10.1016/j.jviromet.2008.05.016CrossRefPubMed Decaro N, Elia G, Campolo M, Desario C, Mari V, Radogna A, Colaianni ML, Cirone F, Tempesta M, Buonavoglia C: Detection of bovine coronavirus using a TaqMan-based real-time RT-PCR assay. J Virol Methods. 2008,151(2):167-171. 10.1016/j.jviromet.2008.05.016CrossRefPubMed
29.
go back to reference Elia G, Tarsitano E, Camero M, Bellacicco AL, Buonavoglia D, Campolo M, Decaro N, Thiry J, Tempesta M: Development of a real-time PCR for the detection and quantitation of caprine herpesvirus 1 in goats. J Virol Methods. 2008,148(1-2):155-160. 10.1016/j.jviromet.2007.10.021CrossRefPubMed Elia G, Tarsitano E, Camero M, Bellacicco AL, Buonavoglia D, Campolo M, Decaro N, Thiry J, Tempesta M: Development of a real-time PCR for the detection and quantitation of caprine herpesvirus 1 in goats. J Virol Methods. 2008,148(1-2):155-160. 10.1016/j.jviromet.2007.10.021CrossRefPubMed
Metadata
Title
Development of TaqMan® MGB fluorescent real-time PCR assay for the detection of anatid herpesvirus 1
Authors
Yufei Guo
Anchun Cheng
Mingshu Wang
Chanjuan Shen
Renyong Jia
Shun Chen
Na Zhang
Publication date
01-12-2009
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2009
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-6-71

Other articles of this Issue 1/2009

Virology Journal 1/2009 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.