Skip to main content
Top
Published in: Virology Journal 1/2010

Open Access 01-12-2010 | Short report

Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene

Authors: Cuiping Song, Chao Zhu, Chaofan Zhang, Shangjin Cui

Published in: Virology Journal | Issue 1/2010

Login to get access

Abstract

A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 102 DNA copies/μL, and the assay was linear in the range of 1 × 102 to 1 × 109 copies/μL. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV.
Appendix
Available only for authorised users
Literature
1.
go back to reference Mengeling WL: Porcine parvovirus. In Diseases of Swine. Ninth edition. Edited by: Straw BE, Zimmerman JJ, D'Allaire S, Taylor DJ. Black-well Publishing, Ames, IA; 2006:93-1400. Mengeling WL: Porcine parvovirus. In Diseases of Swine. Ninth edition. Edited by: Straw BE, Zimmerman JJ, D'Allaire S, Taylor DJ. Black-well Publishing, Ames, IA; 2006:93-1400.
2.
go back to reference Hong-Ying Chen, Xiao-Kang Li, Bao-An Cui, Zhan-Yong Wei, Xin-Sheng Li, Yan-Bin Wanga, Li Zhaoa, Zhen-Ya Wanga: A TaqMan-based real-time polymerase chain reaction for the detection of porcine parvovirus. Journal of Virological Methods 2009, 84-88. Hong-Ying Chen, Xiao-Kang Li, Bao-An Cui, Zhan-Yong Wei, Xin-Sheng Li, Yan-Bin Wanga, Li Zhaoa, Zhen-Ya Wanga: A TaqMan-based real-time polymerase chain reaction for the detection of porcine parvovirus. Journal of Virological Methods 2009, 84-88.
3.
go back to reference Mengeling WL, Lager KM, Zimmerman JK, Samarikermani N, Beran GW: A current assessment of the role of porcine parvovirus as a cause of fetal porcine death. J Vet Diagn Invest 1991, 3: 33-35.PubMedCrossRef Mengeling WL, Lager KM, Zimmerman JK, Samarikermani N, Beran GW: A current assessment of the role of porcine parvovirus as a cause of fetal porcine death. J Vet Diagn Invest 1991, 3: 33-35.PubMedCrossRef
4.
go back to reference Kim J, Chae C: A comparison of virus isolation, polymerase chain reaction, immunohistochemistry, and in situ hybridization for the detection of porcine circovirus 2 and porcine parvovirus in experimentally and naturally coinfected pigs. J Vet Diagn Invest 2004,16(1):45-50.PubMedCrossRef Kim J, Chae C: A comparison of virus isolation, polymerase chain reaction, immunohistochemistry, and in situ hybridization for the detection of porcine circovirus 2 and porcine parvovirus in experimentally and naturally coinfected pigs. J Vet Diagn Invest 2004,16(1):45-50.PubMedCrossRef
5.
go back to reference Zeeuw EJ, Leinecker N, Herwig V, Selbitz HJ, Truyen U: Study of the virulence and cross-neutralization capability of recent porcine parvovirus field isolates and vaccine viruses in experimentally infected pregnant gilts. J Gen Virol 2007, 88: 420-427. 10.1099/vir.0.82302-0PubMedCrossRef Zeeuw EJ, Leinecker N, Herwig V, Selbitz HJ, Truyen U: Study of the virulence and cross-neutralization capability of recent porcine parvovirus field isolates and vaccine viruses in experimentally infected pregnant gilts. J Gen Virol 2007, 88: 420-427. 10.1099/vir.0.82302-0PubMedCrossRef
6.
go back to reference Shackelton LA, Hoelzer K, Parrish CR, Holmes EC: Comparative analysis reveals frequent recombination in the parvoviruses. J Gen Virol 2007, 88: 3294-3301. 10.1099/vir.0.83255-0PubMedPubMedCentralCrossRef Shackelton LA, Hoelzer K, Parrish CR, Holmes EC: Comparative analysis reveals frequent recombination in the parvoviruses. J Gen Virol 2007, 88: 3294-3301. 10.1099/vir.0.83255-0PubMedPubMedCentralCrossRef
7.
go back to reference Molitor TW, Joo HS, Collet MS: Porcine parvovirus Virus purification and structural and antigenic properties of viron polypeptides. Virology 1983, 45: 842-854. Molitor TW, Joo HS, Collet MS: Porcine parvovirus Virus purification and structural and antigenic properties of viron polypeptides. Virology 1983, 45: 842-854.
8.
go back to reference Soares RM, Durignon EL, Bersano JG, Richtzenhain LJ: Detection of porcine parvovirus DNA by the polymerase chain reaction assay using primers to the highly conserved nonstructural protein gene, NS-1. J Virol Methods 1999, 78: 191-198. 10.1016/S0166-0934(98)00177-3PubMedCrossRef Soares RM, Durignon EL, Bersano JG, Richtzenhain LJ: Detection of porcine parvovirus DNA by the polymerase chain reaction assay using primers to the highly conserved nonstructural protein gene, NS-1. J Virol Methods 1999, 78: 191-198. 10.1016/S0166-0934(98)00177-3PubMedCrossRef
9.
go back to reference Wilhelm S, Zeeuw EJ, Selbitz HJ, Truyen U: Real-time PCR protocol for the detection of porcine parvovirus in field samples. J Virol Methods 2006, 134: 257-260. 10.1016/j.jviromet.2006.01.004PubMedCrossRef Wilhelm S, Zeeuw EJ, Selbitz HJ, Truyen U: Real-time PCR protocol for the detection of porcine parvovirus in field samples. J Virol Methods 2006, 134: 257-260. 10.1016/j.jviromet.2006.01.004PubMedCrossRef
10.
go back to reference Astell CR, Thomson M, Chow MB, Ward DC: Structure and replication of minute virus of mouse DNA. Cold Spring Harb Sym Quant Biol 1983, 47: 751-762.CrossRef Astell CR, Thomson M, Chow MB, Ward DC: Structure and replication of minute virus of mouse DNA. Cold Spring Harb Sym Quant Biol 1983, 47: 751-762.CrossRef
Metadata
Title
Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
Authors
Cuiping Song
Chao Zhu
Chaofan Zhang
Shangjin Cui
Publication date
01-12-2010
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2010
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-7-353

Other articles of this Issue 1/2010

Virology Journal 1/2010 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.