Skip to main content
Top
Published in: BMC Infectious Diseases 1/2002

Open Access 01-12-2002 | Research article

Detection of PneumocystisDNA in samples from patients suspected of bacterial pneumonia- a case-control study

Authors: Jannik Helweg-Larsen, Jørgen Skov Jensen, Birthe Dohn, Thomas L Benfield, Bettina Lundgren

Published in: BMC Infectious Diseases | Issue 1/2002

Login to get access

Abstract

Background

Pneumocystis jiroveci (formerly known as P. carinii f.sp. hominis) is an opportunistic fungus that causes Pneumocystis pneumonia (PCP) in immunocompromised individuals. Pneumocystis jiroveci can be detected by polymerase chain reaction (PCR). To investigate the clinical importance of a positive Pneumocystis-PCR among HIV-uninfected patients suspected of bacterial pneumonia, a retrospective matched case-control study was conducted.

Methods

Respiratory samples from 367 patients suspected of bacterial pneumonia were analysed by PCR amplification of Pneumocystis jiroveci. To compare clinical factors associated with carriage of P. jiroveci, a case-control study was done. For each PCR-positive case, four PCR-negative controls, randomly chosen from the PCR-negative patients, were matched on sex and date of birth.

Results

Pneumocystis-DNA was detected in 16 (4.4%) of patients. The median age for PCR-positive patients was higher than PCR-negative patients (74 vs. 62 years, p = 0.011). PCR-positive cases had a higher rate of chronic or severe concomitant illness (15 (94%)) than controls (32 (50%)) (p = 0.004). Twelve (75%) of the 16 PCR positive patients had received corticosteroids, compared to 8 (13%) of the 64 PCR-negative controls (p < 0.001).
Detection of Pneumocystis-DNA was associated with a worse prognosis: seven (44%) of patients with positive PCR died within one month compared to nine (14%) of the controls (p = 0.01). None of the nine PCR-positive patients who survived had developed PCP at one year of follow-up.

Conclusions

Our data suggest that carriage of Pneumocystis jiroveci is associated with old age, concurrent disease and steroid treatment. PCR detection of P. jiroveci has low specificity for diagnosing PCP among patients without established immunodeficiency. Whether overt infection is involved in the poorer prognosis or merely reflects sub-clinical carriage is not clear. Further studies of P. jiroveci in patients receiving systemic treatment with corticosteroids are warranted.
Literature
1.
2.
go back to reference Helweg-Larsen J, Jensen JS, Benfield T, Svendsen UG, Lundgren JD, Lundgren B: Diagnostic use of PCR for detection of Pneumocystis carinii in oral wash samples. J Clin Microbiol. 1998, 36: 2068-2072.PubMedPubMedCentral Helweg-Larsen J, Jensen JS, Benfield T, Svendsen UG, Lundgren JD, Lundgren B: Diagnostic use of PCR for detection of Pneumocystis carinii in oral wash samples. J Clin Microbiol. 1998, 36: 2068-2072.PubMedPubMedCentral
3.
go back to reference Helweg-Larsen J, Skov Jensen J, Lundgren B: Non-invasive diagnosis of Pneumocystis carinii pneumonia by PCR on oral washes. Lancet. 1997, 350: 1363-10.1016/S0140-6736(97)24045-6.CrossRefPubMed Helweg-Larsen J, Skov Jensen J, Lundgren B: Non-invasive diagnosis of Pneumocystis carinii pneumonia by PCR on oral washes. Lancet. 1997, 350: 1363-10.1016/S0140-6736(97)24045-6.CrossRefPubMed
4.
go back to reference Wakefield AE, Pixley FJ, Banerji S, Sinclair K, Miller RF, Moxon ER, Hopkin JM: Detection of Pneumocystis carinii with DNA amplification. Lancet. 1990, 336: 451-453. 10.1016/0140-6736(90)92008-6.CrossRefPubMed Wakefield AE, Pixley FJ, Banerji S, Sinclair K, Miller RF, Moxon ER, Hopkin JM: Detection of Pneumocystis carinii with DNA amplification. Lancet. 1990, 336: 451-453. 10.1016/0140-6736(90)92008-6.CrossRefPubMed
5.
go back to reference Hunter JA, Wakefield AE: Genetic divergence at the mitochondrial small subunit ribosomal RNA gene among isolates of Pneumocystis carinii from five mammalian host species. Journal of Eukaryotic Microbiology. 1996, 43: 24S-25S.CrossRefPubMed Hunter JA, Wakefield AE: Genetic divergence at the mitochondrial small subunit ribosomal RNA gene among isolates of Pneumocystis carinii from five mammalian host species. Journal of Eukaryotic Microbiology. 1996, 43: 24S-25S.CrossRefPubMed
6.
go back to reference Huang SN, Fischer SH, O'Shaughnessy E, Gill VJ, Masur H, Kovacs JA: Development of a PCR assay for diagnosis of Pneumocystis carinii pneumonia based on amplification of the multicopy major surface glycoprotein gene family. Diagn Microbiol Infect Dis. 1999, 35: 27-32. 10.1016/S0732-8893(99)00050-4.CrossRefPubMed Huang SN, Fischer SH, O'Shaughnessy E, Gill VJ, Masur H, Kovacs JA: Development of a PCR assay for diagnosis of Pneumocystis carinii pneumonia based on amplification of the multicopy major surface glycoprotein gene family. Diagn Microbiol Infect Dis. 1999, 35: 27-32. 10.1016/S0732-8893(99)00050-4.CrossRefPubMed
7.
go back to reference Roux P, Lavrard I, Poirot JL, Chouaid C, Denis M, Olivier JL, Nigou M, Miltgen M: Usefulness of PCR for detection of Pneumocystis carinii DNA. J Clin Microbiol. 1994, 32: 2324-2326.PubMedPubMedCentral Roux P, Lavrard I, Poirot JL, Chouaid C, Denis M, Olivier JL, Nigou M, Miltgen M: Usefulness of PCR for detection of Pneumocystis carinii DNA. J Clin Microbiol. 1994, 32: 2324-2326.PubMedPubMedCentral
8.
go back to reference Yale SH, Limper AH: Pneumocystis carinii pneumonia in patients without acquired immunodeficiency syndrome: associated illness and prior corticosteroid therapy. Mayo Clin Proc. 1996, 71: 5-13.CrossRefPubMed Yale SH, Limper AH: Pneumocystis carinii pneumonia in patients without acquired immunodeficiency syndrome: associated illness and prior corticosteroid therapy. Mayo Clin Proc. 1996, 71: 5-13.CrossRefPubMed
9.
go back to reference Sepkowitz KA, Brown AE, Telzak EE, Gottlieb S, Armstrong D: Pneumocystis carinii pneumonia among patients without AIDS at a cancer hospital. JAMA. 1992, 267: 832-837. 10.1001/jama.267.6.832.CrossRefPubMed Sepkowitz KA, Brown AE, Telzak EE, Gottlieb S, Armstrong D: Pneumocystis carinii pneumonia among patients without AIDS at a cancer hospital. JAMA. 1992, 267: 832-837. 10.1001/jama.267.6.832.CrossRefPubMed
10.
go back to reference Arend SM, Kroon FP, Van't Wout JW: Pneumocystis carinii pneumonia in patients without AIDS, 1980 through 1993. Archives of Internal Medicine. 1995, 155: 2436-2441. 10.1001/archinte.155.22.2436.CrossRefPubMed Arend SM, Kroon FP, Van't Wout JW: Pneumocystis carinii pneumonia in patients without AIDS, 1980 through 1993. Archives of Internal Medicine. 1995, 155: 2436-2441. 10.1001/archinte.155.22.2436.CrossRefPubMed
11.
go back to reference Sing A, Trebesius K, Roggenkamp A, Russmann H, Tybus K, Pfaff F, Bogner JR, Emminger C, Heesemann J: Evaluation of diagnostic value and epidemiological implications of PCR for pneumocystis carinii in different immunosuppressed and immunocompetent patient groups. J Clin Microbiol. 2000, 38: 1461-1467.PubMedPubMedCentral Sing A, Trebesius K, Roggenkamp A, Russmann H, Tybus K, Pfaff F, Bogner JR, Emminger C, Heesemann J: Evaluation of diagnostic value and epidemiological implications of PCR for pneumocystis carinii in different immunosuppressed and immunocompetent patient groups. J Clin Microbiol. 2000, 38: 1461-1467.PubMedPubMedCentral
12.
go back to reference Rabodonirina M, Raffenot D, Cotte L, Boibieux A, Mayencon M, Bayle G, Persat F, Rabatel F, Trepo C, Peyramond D, et al: Rapid detection of Pneumocystis carinii in bronchoalveolar lavage specimens from human immunodeficiency virus-infected patients: use of a simple DNA extraction procedure and nested PCR. J Clin Microbiol. 1997, 35: 2748-2751.PubMedPubMedCentral Rabodonirina M, Raffenot D, Cotte L, Boibieux A, Mayencon M, Bayle G, Persat F, Rabatel F, Trepo C, Peyramond D, et al: Rapid detection of Pneumocystis carinii in bronchoalveolar lavage specimens from human immunodeficiency virus-infected patients: use of a simple DNA extraction procedure and nested PCR. J Clin Microbiol. 1997, 35: 2748-2751.PubMedPubMedCentral
13.
go back to reference Peglow SL, Smulian AG, Linke MJ, Pogue CL, Nurre S, Crisler J, Phair J, Gold JW, Armstrong D, Walzer PD: Serologic responses to Pneumocystis carinii antigens in health and disease. J Infect Dis. 1990, 161: 296-306.CrossRefPubMed Peglow SL, Smulian AG, Linke MJ, Pogue CL, Nurre S, Crisler J, Phair J, Gold JW, Armstrong D, Walzer PD: Serologic responses to Pneumocystis carinii antigens in health and disease. J Infect Dis. 1990, 161: 296-306.CrossRefPubMed
14.
go back to reference Vargas SL, Hughes WT, Santolaya ME, Ulloa AV, Ponce CA, Cabrera CE, Cumsille F, Gigliotti F: Search for primary infection by Pneumocystis carinii in a cohort of normal, healthy infants. Clin Infect Dis. 2001, 32: 855-861. 10.1086/319340.CrossRefPubMed Vargas SL, Hughes WT, Santolaya ME, Ulloa AV, Ponce CA, Cabrera CE, Cumsille F, Gigliotti F: Search for primary infection by Pneumocystis carinii in a cohort of normal, healthy infants. Clin Infect Dis. 2001, 32: 855-861. 10.1086/319340.CrossRefPubMed
15.
go back to reference Chen W, Gigliotti F, Harmsen AG: Latency is not an inevitable outcome of infection with Pneumocystis carinii. Infect Immun. 1993, 61: 5406-5409.PubMedPubMedCentral Chen W, Gigliotti F, Harmsen AG: Latency is not an inevitable outcome of infection with Pneumocystis carinii. Infect Immun. 1993, 61: 5406-5409.PubMedPubMedCentral
16.
go back to reference Vargas SL, Hughes WT, Wakefield AE, Oz HS: Limited persistence in and subsequent elimination of Pneumocystis carinii from the lungs after P. carinii pneumonia. J Infect Dis. 1995, 172: 506-510.CrossRefPubMed Vargas SL, Hughes WT, Wakefield AE, Oz HS: Limited persistence in and subsequent elimination of Pneumocystis carinii from the lungs after P. carinii pneumonia. J Infect Dis. 1995, 172: 506-510.CrossRefPubMed
17.
go back to reference Peters SE, Wakefield AE, Sinclair K, Millard PR, Hopkin JM: A search for Pneumocystis carinii in post-mortem lungs by DNA amplification. Journal of Pathology. 1992, 166: 195-198.CrossRefPubMed Peters SE, Wakefield AE, Sinclair K, Millard PR, Hopkin JM: A search for Pneumocystis carinii in post-mortem lungs by DNA amplification. Journal of Pathology. 1992, 166: 195-198.CrossRefPubMed
18.
go back to reference Dumoulin A, Mazars E, Seguy N, Gargallo-Viola D, Vargas S, Cailliez JC, Aliouat EM, Wakefield AE, Dei-Cas E: Transmission of Pneumocystis carinii disease from immunocompetent contacts of infected hosts to susceptible hosts. Eur J Clin Microbiol Infect Dis. 2000, 19: 671-678. 10.1007/s100960000354.CrossRefPubMed Dumoulin A, Mazars E, Seguy N, Gargallo-Viola D, Vargas S, Cailliez JC, Aliouat EM, Wakefield AE, Dei-Cas E: Transmission of Pneumocystis carinii disease from immunocompetent contacts of infected hosts to susceptible hosts. Eur J Clin Microbiol Infect Dis. 2000, 19: 671-678. 10.1007/s100960000354.CrossRefPubMed
19.
go back to reference Nevez G, Jounieaux V, Linas MD, Guyot K, Leophonte P, Massip P, Schmit JL, Seguela JP, Camus D, Dei-Cas E, Raccurt C, Mazars E: High frequency of Pneumocystis carinii sp.f. hominis colonization in HIV-negative patients. Journal of Eukaryotic Microbiology. 1997, 44: 36S-CrossRefPubMed Nevez G, Jounieaux V, Linas MD, Guyot K, Leophonte P, Massip P, Schmit JL, Seguela JP, Camus D, Dei-Cas E, Raccurt C, Mazars E: High frequency of Pneumocystis carinii sp.f. hominis colonization in HIV-negative patients. Journal of Eukaryotic Microbiology. 1997, 44: 36S-CrossRefPubMed
20.
go back to reference Olsson M, Stralin K, Holmberg H: Clinical significance of nested polymerase chain reaction and immunofluorescence for detection of Pneumocystis carinii pneumonia. Clin Microbiol Infect. 2001, 7: 492-497. 10.1046/j.1469-0691.2001.00309.x.CrossRefPubMed Olsson M, Stralin K, Holmberg H: Clinical significance of nested polymerase chain reaction and immunofluorescence for detection of Pneumocystis carinii pneumonia. Clin Microbiol Infect. 2001, 7: 492-497. 10.1046/j.1469-0691.2001.00309.x.CrossRefPubMed
21.
go back to reference Takahashi T, Goto M, Endo T, Nakamura T, Yusa N, Sato N, Iwamoto A: Pneumocystis carinii carriage in immunocompromised patients with and without human immunodeficiency virus infection. J Med Microbiol. 2002, 51: 611-614.CrossRefPubMed Takahashi T, Goto M, Endo T, Nakamura T, Yusa N, Sato N, Iwamoto A: Pneumocystis carinii carriage in immunocompromised patients with and without human immunodeficiency virus infection. J Med Microbiol. 2002, 51: 611-614.CrossRefPubMed
22.
go back to reference Sing A, Roggenkamp A, Autenrieth IB, Heesemann J: Pneumocystis carinii carriage in immunocompetent patients with primary pulmonary disorders as detected by single or nested PCR. J Clin Microbiol. 1999, 37: 3409-3410.PubMedPubMedCentral Sing A, Roggenkamp A, Autenrieth IB, Heesemann J: Pneumocystis carinii carriage in immunocompetent patients with primary pulmonary disorders as detected by single or nested PCR. J Clin Microbiol. 1999, 37: 3409-3410.PubMedPubMedCentral
23.
go back to reference Visconti E, Marinaci S, Zolfo M, Mencarini P, Tamburrini E, Pagliari G, Ortona E, Siracusano A: Very low frequence of Pneumocystis carinii DNA detection by PCR in specimens from patients with lung damage. J Clin Microbiol. 2000, 38: 1307-1308.PubMedPubMedCentral Visconti E, Marinaci S, Zolfo M, Mencarini P, Tamburrini E, Pagliari G, Ortona E, Siracusano A: Very low frequence of Pneumocystis carinii DNA detection by PCR in specimens from patients with lung damage. J Clin Microbiol. 2000, 38: 1307-1308.PubMedPubMedCentral
24.
go back to reference Oz HS, Hughes WT: Search for pneumocystis carinii DNA in upper and lower respiratory tract of humans. Diagn Microbiol Infect Dis. 2000, 37: 161-164. 10.1016/S0732-8893(00)00146-2.CrossRefPubMed Oz HS, Hughes WT: Search for pneumocystis carinii DNA in upper and lower respiratory tract of humans. Diagn Microbiol Infect Dis. 2000, 37: 161-164. 10.1016/S0732-8893(00)00146-2.CrossRefPubMed
25.
go back to reference Settnes OP, Genner J: Pneumocystis carinii in human lungs at autopsy. Scand J Infect Dis. 1986, 18: 489-496.CrossRefPubMed Settnes OP, Genner J: Pneumocystis carinii in human lungs at autopsy. Scand J Infect Dis. 1986, 18: 489-496.CrossRefPubMed
26.
go back to reference Fine MJ, Smith MA, Carson CA, Mutha SS, Sankey SS, Weissfeld LA, Kapoor WN: Prognosis and outcomes of patients with community-acquired pneumonia. A meta-analysis. Jama. 1996, 275: 134-141. 10.1001/jama.275.2.134.CrossRefPubMed Fine MJ, Smith MA, Carson CA, Mutha SS, Sankey SS, Weissfeld LA, Kapoor WN: Prognosis and outcomes of patients with community-acquired pneumonia. A meta-analysis. Jama. 1996, 275: 134-141. 10.1001/jama.275.2.134.CrossRefPubMed
27.
go back to reference Larsen HH, Masur H, Kovacs JA, Gill VJ, Silcott VA, Kogulan P, Maenza J, Smith M, Lucey DR, Fischer SH: Development and evaluation of a quantitative, touch-down, real-time PCR assay for diagnosing Pneumocystis carinii pneumonia. J Clin Microbiol. 2002, 40: 490-494. 10.1128/JCM.40.2.490-494.2002.CrossRefPubMedPubMedCentral Larsen HH, Masur H, Kovacs JA, Gill VJ, Silcott VA, Kogulan P, Maenza J, Smith M, Lucey DR, Fischer SH: Development and evaluation of a quantitative, touch-down, real-time PCR assay for diagnosing Pneumocystis carinii pneumonia. J Clin Microbiol. 2002, 40: 490-494. 10.1128/JCM.40.2.490-494.2002.CrossRefPubMedPubMedCentral
Metadata
Title
Detection of PneumocystisDNA in samples from patients suspected of bacterial pneumonia- a case-control study
Authors
Jannik Helweg-Larsen
Jørgen Skov Jensen
Birthe Dohn
Thomas L Benfield
Bettina Lundgren
Publication date
01-12-2002
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2002
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/1471-2334-2-28

Other articles of this Issue 1/2002

BMC Infectious Diseases 1/2002 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.