Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 4/2016

01-04-2016 | Brief Report

Detection and genetic characterization of a novel parvovirus distantly related to human bufavirus in domestic pigs

Authors: Renáta Hargitai, Péter Pankovics, Attila Mihály Kertész, Hunor Bíró, Ákos Boros, Tung Gia Phan, Eric Delwart, Gábor Reuter

Published in: Archives of Virology | Issue 4/2016

Login to get access

Abstract

In this study, a novel parvovirus (strain swine/Zsana3/2013/HUN, KT965075) was detected in domestic pigs and genetically characterized by viral metagenomics and PCR methods. The novel parvovirus was distantly related to the human bufaviruses and was detected in 19 (90.5 %) of the 21 and five (33.3 %) of the 15 faecal samples collected from animals with and without cases of posterior paraplegia of unknown etiology from five affected farms and one control farm in Hungary, respectively. Swine/Zsana3/2013/HUN is highly prevalent in domestic pigs and potentially represents a novel parvovirus species in the subfamily Parvovirinae.
Literature
1.
Altay A, Yahiro T, Bozdayi G, Matschumoto T, Sahin F, Ozkan S, Nishizono A, Söderlund-Venermo M, Ahmed K (2015) Bufavirus genotype 3 in Turkish children with severe diarrhoea. Clin Microbiol Infect 21(10):965.e1–965.e4CrossRef
2.
Boros A, Pankovics P, Simmonds P, Reuter G (2011) Novel positive-sense, single-stranded RNA (+ssRNA) virus with di-cistronic genome from intestinal content of freshwater carp (Cyprinus carpio). PLoS One 6:e29145CrossRefPubMedPubMedCentral
3.
Chieochansin T, Vutithanachot V, Theamboonlers A, Poovorawan Y (2015) Bufavirus in fecal specimens of patients with and without diarrhea in Thailand. Arch Virol 160:1781–1784CrossRefPubMed
4.
5.
Cotmore SF, Agbandje-McKenna M, Chiorini JA, Mukha DV, Pintel DJ, Qiu J, Söderlund-Venermo M, Tattersall P, Tijssen P, Gatherer D, Davison AJ (2014) The family Parvoviridae. Arch Virol 159:1239–1247CrossRefPubMedPubMedCentral
6.
Handley SA, Thackray LB, Zhao G, Presti R, Miller AD, Droit L, Abbink P, Maxfield LF, Kambal A, Duan E, Stanley K, Kramer J, Macri SC, Permar SR, Schmitz JE, Mansfield K, Brenchley JM, Veazey RS, Stappenbeck TS, Wang D, Barouch DH, Virgin HW (2012) Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome. Cell 151(2):253–266CrossRefPubMedPubMedCentral
7.
Huang DD, Wang W, Lu QB, Zhao J, Guo CT, Wang HY, Zhang XA, Tong YG, Liu W, Cao WC (2015) Identification of bufavirus-1 and bufavirus-3 in feces of patients with acute diarrhea, China. Sci Rep 19:13272CrossRef
8.
Kemenesi G, Dallos B, Görföl T, Estók P, Boldogh S, Kurucz K, Oldal M, Marton S, Bányai K, Jakab F (2015) Genetic diversity and recombination within bufaviruses: detection of a novel strain in Hungarian bats. Infect Genet Evol 33:288–292CrossRefPubMed
9.
Phan TG, Vo NP, Bonkoungou IJ, Kapoor A, Barro N, O’Ryan M, Kapusinszky B, Wang C, Delwart E (2012) Acute diarrhea in West African children: diverse enteric viruses and novel parvovirus genus. J Virol 86:11024–11030CrossRefPubMedPubMedCentral
10.
Phan TG, Vo NP, Boros Á, Pankovics P, Reuter G, Li OTW, Wang C, Deng X, Poon LLM, Delwart E (2013) The viruses of wild pigeon droppings. PLoS One 8(9):e72787CrossRefPubMedPubMedCentral
11.
Reynolds KJ, Sheridan M, Preugschas K (2013) Posterior paresis and paralysis associated with spinal cord vacuolation in late finisher pigs. Poster 40; American Association of Swine Veterinarians (AASV) 2013 annual meeting, San Diego. Program book page 339
12.
Sasaki M, Orba Y, Anindita PD, Ishii A, Ueno K, Hang’ombe BM, Mweene AS, Ito K, Sawa H (2015) Distinct lineages of bufavirus in wild shrews and nonhuman primates. Emerg Infect Dis 21:1230–1233CrossRefPubMedPubMedCentral
13.
Smith SL, Schapendonk CM, van Beek J, Vennema H, Schürch AC, Schipper D, Bodewes R, Haagmans BL, Osterhaus AD, Koopmans MP (2014) New viruses in idiopathic human diarrhea cases, the Netherlands. Emerg Infect Dis 20:1218–1222CrossRef
14.
15.
Tijssen P, Agbandje-McKenna M, Almendral JM, Bergoin M, Flegel TW, Hedman K, Kleinschmidt J, Li Y, Pintel DJ, Tattersall P (2011) The family Parvoviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy—ninth report of the International Committee on Taxonomy of Viruses. Elsevier/Academic Press, London, pp 405–425
16.
Väisänen E, Kuisma I, Phan TG, Delwart E, Lappalainen M, Tarkka E, Hedman K, Söderlund-Venermo M (2014) Bufavirus in feces of patients with gastroenteritis, Finland. Emerg Infect Dis 20:1077–1080CrossRefPubMedPubMedCentral
17.
Victoria JG, Kapoor A, Li L, Blinkova O, Slikas B, Wang C, Naeem A, Zaidi S, Delwart E (2009) Metagenomic analysis of viruses in stool samples from children with acute flaccid paralysis. J Virol 83:4642–4651CrossRefPubMedPubMedCentral
18.
Yahiro T, Wangchuk S, Tshering K, Bandhari P, Zangmo S, Dorji T, Tshering K, Matsumoto T, Nishizono A, Söderlund-Venermo M, Ahmed K (2014) Novel human bufavirus genotype 3 in children with severe diarrhea, Bhutan. Emerg Infect Dis 20:1037–1039CrossRefPubMedPubMedCentral
Metadata
Title
Detection and genetic characterization of a novel parvovirus distantly related to human bufavirus in domestic pigs
Authors
Renáta Hargitai
Péter Pankovics
Attila Mihály Kertész
Hunor Bíró
Ákos Boros
Tung Gia Phan
Eric Delwart
Gábor Reuter
Publication date
01-04-2016
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 4/2016
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-015-2732-4

Other articles of this Issue 4/2016

Archives of Virology 4/2016 Go to the issue

Annotated Sequence Record

Complete genome sequence of a Chuzan virus strain isolated for the first time in mainland China

Original Article

Conserved arginine residues in the carboxyl terminus of the equine arteritis virus E protein may play a role in heparin binding but may not affect viral infectivity in equine endothelial cells

Original Article

A critical role of LAMP-1 in avian reovirus P10 degradation associated with inhibition of apoptosis and virus release

Brief Report

Identification of (-)-epigallocatechin-3-gallate as a potential agent for blocking infection by grass carp reovirus

Brief Report

Multiple amino acid substitutions involved in the adaptation of avian-origin influenza A (H10N7) virus in mice

Brief Report

Genetic diversity and molecular evolution of arabis mosaic virus based on the CP gene sequence
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Pediatric Cardiology Video

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

Cardiopulmonary Comorbidity Video

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Valvular Heart Disease Video

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.

ACC 2024 Congress Coverage

Heart Failure Video

Year in Review: Heart failure and cardiomyopathies

Watch now

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.

Semaglutide benefits people with type 2 diabetes and obesity-related heart failure

16-04-2024 Type 2 Diabetes News

Incentivised to exercise

11-04-2024 Lifestyle Modifications News

New intervention for STEMI-related cardiogenic shock

10-04-2024 Myocardial Infarction News

» View more highlights on the ACC 2024 congress hub page

Image Credits