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Published in: International Journal of Legal Medicine 3/2021

01-05-2021 | Computed Tomography | Original Article

Machine learning approaches for sex estimation using cranial measurements

Authors: Diana Toneva, Silviya Nikolova, Gennady Agre, Dora Zlatareva, Vassil Hadjidekov, Nikolai Lazarov

Published in: International Journal of Legal Medicine | Issue 3/2021

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Abstract

The aim of the present study is to apply support vector machines (SVM) and artificial neural network (ANN) as sex classifiers and to generate useful classification models for sex estimation based on cranial measurements. Besides, the performance of the generated sub-symbolic machine learning models is compared with models developed through logistic regression (LR). The study was carried out on computed tomography images of 393 Bulgarian adults (169 males and 224 females). The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of the cranial measurements. A total of 64 measurements (linear distances, angles, triangle areas and heights) and 22 indices were calculated. Two datasets were assembled including the linear measurements only and all measurements and index, respectively. An additional third dataset comprising all possible interlandmark distances between the landmarks was constructed. Two machine learning algorithms—SVM and ANN and a traditional statistical analysis LR—were applied to generate models for sex estimation. In addition, two advanced attribute selection techniques (Weka BestFirst and Weka GeneticSearch) were used. The classification accuracy of the models was evaluated by means of 10 × 10-fold cross-validation procedure. All three methods achieved accuracy results higher than 95%. The best accuracy (96.1 ± 0.5%) was obtained by SVM and it was statistically significantly higher than the best results achieved by ANN and LR. SVM and ANN reached higher accuracy by training on the full datasets than the selection datasets, except for the sample described by the interlandmark distances, where the reduction of attributes by the GeneticSearch algorithm improved the accuracy.
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Literature
1.
go back to reference Scheuer L (2002) Application of osteology to forensic medicine. Clin Anat 15:297–312CrossRef Scheuer L (2002) Application of osteology to forensic medicine. Clin Anat 15:297–312CrossRef
2.
go back to reference Dedouit F, Savall F, Mokrane F-Z, Rousseau H, Crubézy E, Rougé D, Telmon N (2014) Virtual anthropology and forensic identification using multidetector CT. Br J Radiol 87:20130468CrossRef Dedouit F, Savall F, Mokrane F-Z, Rousseau H, Crubézy E, Rougé D, Telmon N (2014) Virtual anthropology and forensic identification using multidetector CT. Br J Radiol 87:20130468CrossRef
3.
go back to reference Iscan MY, Steyn M (2013) The human skeleton in forensic medicine, 3rd edn. Charles C Thomas Publisher, Springfield Iscan MY, Steyn M (2013) The human skeleton in forensic medicine, 3rd edn. Charles C Thomas Publisher, Springfield
5.
go back to reference Hrdlicka A (1939) Practical anthropometry. The Wistar Institute of Anatomy and Biology, Philadelphia Hrdlicka A (1939) Practical anthropometry. The Wistar Institute of Anatomy and Biology, Philadelphia
6.
go back to reference Krogman WM (1962) The human skeleton in forensic medicine. Charles C. Thomas, Springfield Krogman WM (1962) The human skeleton in forensic medicine. Charles C. Thomas, Springfield
7.
go back to reference Bass WM (1995) Human osteology: a laboratory and field manual of the human skeleton, 4th edn. Archaeological Society, Missouri Bass WM (1995) Human osteology: a laboratory and field manual of the human skeleton, 4th edn. Archaeological Society, Missouri
10.
go back to reference Jantz R, Mahfouz M, Shirley NR, Abdel Fatah E (2013) Improving sex estimation from crania using 3-dimensional CT scans. U.S. Department of Justice, 1–71 Jantz R, Mahfouz M, Shirley NR, Abdel Fatah E (2013) Improving sex estimation from crania using 3-dimensional CT scans. U.S. Department of Justice, 1–71
11.
go back to reference Rösing FW, Graw M, Marre B et al (2007) Recommendations for the forensic diagnosis of sex and age from skeletons. HOMO 58:75–89CrossRef Rösing FW, Graw M, Marre B et al (2007) Recommendations for the forensic diagnosis of sex and age from skeletons. HOMO 58:75–89CrossRef
13.
go back to reference McQueen RJ, Holmes G, Hunt L (1998) User satisfaction with machine learning as a data analysis method in agricultural research. N Z J Agric Res 41:577–584CrossRef McQueen RJ, Holmes G, Hunt L (1998) User satisfaction with machine learning as a data analysis method in agricultural research. N Z J Agric Res 41:577–584CrossRef
14.
go back to reference Valdes G, Chan MF, Lim SB, Scheuermann R, Deasy JO, Solberg TD (2017) IMRT QA using machine learning: a multi-institutional validation. J Appl Clin Med Phys 18:279–284CrossRef Valdes G, Chan MF, Lim SB, Scheuermann R, Deasy JO, Solberg TD (2017) IMRT QA using machine learning: a multi-institutional validation. J Appl Clin Med Phys 18:279–284CrossRef
15.
16.
go back to reference Kording KP, Benjamin A, Farhoodi R, Glaser JI (2018) The roles of machine learning in biomedical science. In: Frontiers of engineering: reports on leading-edge engineering from the 2017 symposium. National Academies Press, Washington, pp 61–72 Kording KP, Benjamin A, Farhoodi R, Glaser JI (2018) The roles of machine learning in biomedical science. In: Frontiers of engineering: reports on leading-edge engineering from the 2017 symposium. National Academies Press, Washington, pp 61–72
18.
go back to reference Musilová B, Dupej J, Velemínská J, Chaumoitre K, Bruzek J (2016) Exocranial surfaces for sex assessment of the human cranium. Forensic Sci Int 269:70–77CrossRef Musilová B, Dupej J, Velemínská J, Chaumoitre K, Bruzek J (2016) Exocranial surfaces for sex assessment of the human cranium. Forensic Sci Int 269:70–77CrossRef
21.
go back to reference Arigbabu OA, Liao IY, Abdullah N, Noor MHM (2018) Novel group variable selection for salient skull region selection and sex determination. In: Ren J, Hussain A, Zheng J, Liu C-L, Luo B, Zhao H, Zhao X (eds) Advances in brain inspired cognitive systems: BICS 2018. Springer International Publishing, Cham, pp 248–259. https://doi.org/10.1007/978-3-030-00563-4_24 Arigbabu OA, Liao IY, Abdullah N, Noor MHM (2018) Novel group variable selection for salient skull region selection and sex determination. In: Ren J, Hussain A, Zheng J, Liu C-L, Luo B, Zhao H, Zhao X (eds) Advances in brain inspired cognitive systems: BICS 2018. Springer International Publishing, Cham, pp 248–259. https://​doi.​org/​10.​1007/​978-3-030-00563-4_​24
27.
go back to reference Cignoni P, Callieri M, Corsini M, Dellepiane M, Ganovelli F, Ranzuglia G (2008) MeshLab: an open-source mesh processing tool. In: Scarano V, de Chiara R, Erra U (eds) Sixth eurographics Italian chapter conference. Eurographics Association, Salerno, pp 129–136 Cignoni P, Callieri M, Corsini M, Dellepiane M, Ganovelli F, Ranzuglia G (2008) MeshLab: an open-source mesh processing tool. In: Scarano V, de Chiara R, Erra U (eds) Sixth eurographics Italian chapter conference. Eurographics Association, Salerno, pp 129–136
28.
go back to reference Hammer Ø, Harper DAT, Ryan PD (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electron 4:9–18 Hammer Ø, Harper DAT, Ryan PD (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electron 4:9–18
30.
go back to reference Cortes C, Vapnik V (1995) Support-vector networks. Mach Learn 20:273–297 Cortes C, Vapnik V (1995) Support-vector networks. Mach Learn 20:273–297
31.
go back to reference Demšar J, Curk T, Erjavec A, Gorup Č, Hočevar T, Milutinovič M, Možina M, Polajnar M, Toplak M, Starič A, Stajdohar M, Umek L, Žagar L, Žbontar J, Žitnik M, Zupan B (2013) Orange: data mining toolbox in Python. JMLR. 14:2349–2353 Demšar J, Curk T, Erjavec A, Gorup Č, Hočevar T, Milutinovič M, Možina M, Polajnar M, Toplak M, Starič A, Stajdohar M, Umek L, Žagar L, Žbontar J, Žitnik M, Zupan B (2013) Orange: data mining toolbox in Python. JMLR. 14:2349–2353
32.
go back to reference Witten IH, Frank E, Hall MA, Pal CJ (2017) Data mining: practical machine learning tools and techniques (Morgan Kaufmann series in data management systems), 4th edn. Morgan Kaufmann Publishers, San Francisco Witten IH, Frank E, Hall MA, Pal CJ (2017) Data mining: practical machine learning tools and techniques (Morgan Kaufmann series in data management systems), 4th edn. Morgan Kaufmann Publishers, San Francisco
33.
go back to reference Mitchell T (1997) Machine learning. McGraw-Hill Science/Engineering/Math, New York Mitchell T (1997) Machine learning. McGraw-Hill Science/Engineering/Math, New York
34.
go back to reference Witten IH, Frank E, Hall MA (2011) Data mining: practical machine learning tools and techniques. Morgan Kaufmann Publ, Burlington Witten IH, Frank E, Hall MA (2011) Data mining: practical machine learning tools and techniques. Morgan Kaufmann Publ, Burlington
35.
go back to reference Hall MA (1998) Correlation-based feature subset selection for machine learning, PhD Thesis, University of Waikato, Hamilton Hall MA (1998) Correlation-based feature subset selection for machine learning, PhD Thesis, University of Waikato, Hamilton
37.
go back to reference Kim J-H (2009) Estimating classification error rate: repeated cross-validation, repeated hold-out and bootstrap. Comput Stat Data Anal 53:3735–3745CrossRef Kim J-H (2009) Estimating classification error rate: repeated cross-validation, repeated hold-out and bootstrap. Comput Stat Data Anal 53:3735–3745CrossRef
38.
go back to reference Han J, Kamber M, Pei J (2012) Data mining concepts and techniques, 3rd edn. Morgan Kaufmann Publishers, Waltham Han J, Kamber M, Pei J (2012) Data mining concepts and techniques, 3rd edn. Morgan Kaufmann Publishers, Waltham
41.
go back to reference Giles E, Elliot O (1963) Sex determination by discriminant function analysis of crania. Am J Phys Anthropol 21:53–68CrossRef Giles E, Elliot O (1963) Sex determination by discriminant function analysis of crania. Am J Phys Anthropol 21:53–68CrossRef
47.
go back to reference Franklin D, Cardini A, Flavel A, Kuliukas A (2012) The application of traditional and geometric morphometric analyses for forensic quantification of sexual dimorphism: preliminary investigations in a Western Australian population. Int J Legal Med 26:549–558CrossRef Franklin D, Cardini A, Flavel A, Kuliukas A (2012) The application of traditional and geometric morphometric analyses for forensic quantification of sexual dimorphism: preliminary investigations in a Western Australian population. Int J Legal Med 26:549–558CrossRef
48.
go back to reference Dillon A (2014) Cranial sexual dimorphism and the population specificity of anthropological standards. Master Thesis, University of Western Australia Dillon A (2014) Cranial sexual dimorphism and the population specificity of anthropological standards. Master Thesis, University of Western Australia
53.
go back to reference Yang W, Reziwanguli X, Xu J, Wang P, Hu J, Liu X (2018) Sex determination of skull based on fuzzy decision tree. In: Proceedings of the 4th Workshop on Advanced Research and Technology in Industry (WARTIA 2018), Advances in Engineering Research, vol 173, pp 14–20. https://doi.org/10.2991/wartia-18.2018.4 Yang W, Reziwanguli X, Xu J, Wang P, Hu J, Liu X (2018) Sex determination of skull based on fuzzy decision tree. In: Proceedings of the 4th Workshop on Advanced Research and Technology in Industry (WARTIA 2018), Advances in Engineering Research, vol 173, pp 14–20. https://​doi.​org/​10.​2991/​wartia-18.​2018.​4
56.
go back to reference Kimmerle EH, Ross A, Slice DE (2008) Sexual dimorphism in America: geometric morphometric analysis of the craniofacial region. J Forensic Sci 53:54–57CrossRef Kimmerle EH, Ross A, Slice DE (2008) Sexual dimorphism in America: geometric morphometric analysis of the craniofacial region. J Forensic Sci 53:54–57CrossRef
60.
go back to reference Chovalopoulou ME, Bertsatos A (2018) Exploring the shape variation of the human cranium. A geometric morphometrics study on a modern Greek population sample. In: Rissech C, Lloveras L, Nadal J, Fullola JM (eds) Geometric morphometrics. Trends in biology, paleobiology and archaeology. SERP-UB, Barcelona, pp 25–39 Chovalopoulou ME, Bertsatos A (2018) Exploring the shape variation of the human cranium. A geometric morphometrics study on a modern Greek population sample. In: Rissech C, Lloveras L, Nadal J, Fullola JM (eds) Geometric morphometrics. Trends in biology, paleobiology and archaeology. SERP-UB, Barcelona, pp 25–39
64.
go back to reference Chovalopoulou ME, Bertsatos A, Manolis SK (2017) Landmark based sex discrimination on the crania of archaeological Greek populations. A comparative study based on the cranial sexual dimorphism of a modern Greek population. Mediter Archaeol Archaeom 17:37–46 Chovalopoulou ME, Bertsatos A, Manolis SK (2017) Landmark based sex discrimination on the crania of archaeological Greek populations. A comparative study based on the cranial sexual dimorphism of a modern Greek population. Mediter Archaeol Archaeom 17:37–46
68.
go back to reference Toneva D, Nikolova S, Georgiev I (2017) Accuracy of linear measurements on polygonal models of dry mandibles generated from industrial CT data. Acta Morphol Anthropol 24:55–62 Toneva D, Nikolova S, Georgiev I (2017) Accuracy of linear measurements on polygonal models of dry mandibles generated from industrial CT data. Acta Morphol Anthropol 24:55–62
69.
go back to reference Park HK, Chung JW, Kho HS (2006) Use of hand-held laser scanning in the assessment of craniometry. Forensic Sci Int 160:200–206CrossRef Park HK, Chung JW, Kho HS (2006) Use of hand-held laser scanning in the assessment of craniometry. Forensic Sci Int 160:200–206CrossRef
70.
go back to reference Richard AH, Parks CL, Monson KL (2014) Accuracy of standard craniometric measurements using multiple data formats. Forensic Sci Int 242:177–185CrossRef Richard AH, Parks CL, Monson KL (2014) Accuracy of standard craniometric measurements using multiple data formats. Forensic Sci Int 242:177–185CrossRef
71.
go back to reference Toneva D, Nikolova S, Georgiev I (2016) Reliability and accuracy of angular measurements on laser scanning created 3D models of dry skulls. J Anthropol 2016:6218659CrossRef Toneva D, Nikolova S, Georgiev I (2016) Reliability and accuracy of angular measurements on laser scanning created 3D models of dry skulls. J Anthropol 2016:6218659CrossRef
72.
go back to reference Toneva D, Nikolova S, Georgiev I, Tchorbadjieff A (2017) Accuracy of linear craniometric measurements obtained from laser scanning created 3D models of dry skulls. In: Georgiev K, Todorov M, Georgiev I (eds) Advanced computing in industrial mathematics, vol 681. Springer, Cham, pp 215–229 Toneva D, Nikolova S, Georgiev I, Tchorbadjieff A (2017) Accuracy of linear craniometric measurements obtained from laser scanning created 3D models of dry skulls. In: Georgiev K, Todorov M, Georgiev I (eds) Advanced computing in industrial mathematics, vol 681. Springer, Cham, pp 215–229
74.
go back to reference Keen J (1950) A study of differences between male and female skulls. Am J Phys Anthropol 8:65–80CrossRef Keen J (1950) A study of differences between male and female skulls. Am J Phys Anthropol 8:65–80CrossRef
77.
go back to reference Isçan MY, Yoshino M, Kato S (1995) Sexual dimorphism in modem Japanese crania. Am J Hum Biol 7:459–464CrossRef Isçan MY, Yoshino M, Kato S (1995) Sexual dimorphism in modem Japanese crania. Am J Hum Biol 7:459–464CrossRef
Metadata
Title
Machine learning approaches for sex estimation using cranial measurements
Authors
Diana Toneva
Silviya Nikolova
Gennady Agre
Dora Zlatareva
Vassil Hadjidekov
Nikolai Lazarov
Publication date
01-05-2021
Publisher
Springer Berlin Heidelberg
Published in
International Journal of Legal Medicine / Issue 3/2021
Print ISSN: 0937-9827
Electronic ISSN: 1437-1596
DOI
https://doi.org/10.1007/s00414-020-02460-4

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