Skip to main content
Top
Published in: Archives of Virology 8/2013

Open Access 01-08-2013 | Brief Report

Complete nucleotide sequence of a virus associated with rusty mottle disease of sweet cherry (Prunus avium)

Authors: D. V. Villamor, K. L. Druffel, K. C. Eastwell

Published in: Archives of Virology | Issue 8/2013

Login to get access

Abstract

Cherry rusty mottle is a disease of sweet cherries first described in 1940 in western North America. Because of the graft-transmissible nature of the disease, a viral nature of the disease was assumed. Here, the complete genomic nucleotide sequences of virus isolates from two trees expressing cherry rusty mottle disease symptoms are characterized; the virus is designated cherry rusty mottle associated virus (CRMaV). The biological and molecular characteristics of this virus in comparison to those of cherry necrotic rusty mottle virus (CNRMV) and cherry green ring mottle virus (CGRMV) are described. CRMaV was subsequently detected in additional sweet cherry trees expressing symptoms of cherry rusty mottle disease.
Appendix
Available only for authorised users
Literature
1.
go back to reference Reeves EL (1940) Rusty mottle, a new virosis of cherry. Phytopathology 30:789 Reeves EL (1940) Rusty mottle, a new virosis of cherry. Phytopathology 30:789
2.
go back to reference Wadley BN, Nyland G (1976) Rusty mottle group. In: Gilmer R, Moore J, Nyland G, Welsh M, Pine T (eds) Virus diseases and noninfectious disorders of stone fruits in North America. Agricultural Research Service United States Department of Agriculture, Washington, pp 242–249 Wadley BN, Nyland G (1976) Rusty mottle group. In: Gilmer R, Moore J, Nyland G, Welsh M, Pine T (eds) Virus diseases and noninfectious disorders of stone fruits in North America. Agricultural Research Service United States Department of Agriculture, Washington, pp 242–249
3.
go back to reference Nemeth M (1986) Virus, mycoplasma and rickettsia diseases of fruit trees. Akademiai Kiado, Budapest 841 pp Nemeth M (1986) Virus, mycoplasma and rickettsia diseases of fruit trees. Akademiai Kiado, Budapest 841 pp
4.
go back to reference Zhang YP, Kirkpatrick BC, Smart CD, Uyemoto JK (1998) cDNA cloning and molecular characterization of cherry green ring mottle virus. J Gen Virol 79:2275–2281PubMed Zhang YP, Kirkpatrick BC, Smart CD, Uyemoto JK (1998) cDNA cloning and molecular characterization of cherry green ring mottle virus. J Gen Virol 79:2275–2281PubMed
5.
go back to reference Rott ME, Jelkmann W (2001) Complete nucleotide sequence of cherry necrotic rusty mottle virus. Arch Virol 146:395–401CrossRefPubMed Rott ME, Jelkmann W (2001) Complete nucleotide sequence of cherry necrotic rusty mottle virus. Arch Virol 146:395–401CrossRefPubMed
6.
go back to reference Adams MJ, Antoniw JF, Bar-Joseph M, Brunt AA, Candresse T, Foster GD, Martelli GP, Milne RG, Fauquet CM (2004) The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Arch Virol 149:1045–1060PubMed Adams MJ, Antoniw JF, Bar-Joseph M, Brunt AA, Candresse T, Foster GD, Martelli GP, Milne RG, Fauquet CM (2004) The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Arch Virol 149:1045–1060PubMed
7.
go back to reference Adams MJ, Candresse T, Hammond J, Kreuze JF, Martelli GP, Namba S, Pearson MN, Ryu KH, Saldarelli P, Yoshikawa N (2012) Family Betaflexiviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: ninth report of the international committee on taxonomy of viruses. Elsevier Academic Press, London, pp 920–941 Adams MJ, Candresse T, Hammond J, Kreuze JF, Martelli GP, Namba S, Pearson MN, Ryu KH, Saldarelli P, Yoshikawa N (2012) Family Betaflexiviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: ninth report of the international committee on taxonomy of viruses. Elsevier Academic Press, London, pp 920–941
8.
go back to reference Rott ME, Jelkmann W (2001) Development of PCR primer pairs for the characterization and detection of several related filamentous viruses of cherry. In: Clark MF (ed) Proceedings 18th International Symposium on Fruit Tree Virus Diseases. Acta Hort 550, 199–205 Rott ME, Jelkmann W (2001) Development of PCR primer pairs for the characterization and detection of several related filamentous viruses of cherry. In: Clark MF (ed) Proceedings 18th International Symposium on Fruit Tree Virus Diseases. Acta Hort 550, 199–205
9.
go back to reference Rott ME, Jelkmann W (2004) Characterization of a new foveavirus associated with cherry rusty mottle disease. Phytopathology 94:S89 Rott ME, Jelkmann W (2004) Characterization of a new foveavirus associated with cherry rusty mottle disease. Phytopathology 94:S89
10.
go back to reference Rott M, Jelkmann W (2011) Cherry necrotic rusty mottle and cherry rusty mottle viruses. In: Hadidi A, Barba M, Candresse T, Jelkmann W (eds) Virus and virus-like diseases of pome and stone fruits. American Phytopathological Society, Saint Paul, pp 133–136 Rott M, Jelkmann W (2011) Cherry necrotic rusty mottle and cherry rusty mottle viruses. In: Hadidi A, Barba M, Candresse T, Jelkmann W (eds) Virus and virus-like diseases of pome and stone fruits. American Phytopathological Society, Saint Paul, pp 133–136
11.
go back to reference Eastwell KC, Dutoit LJ, Druffel KL (2009) Helleborus net necrosis virus: a new Carlavirus associated with ‘black death’ of Helleborus spp. Plant Dis 93:332–338CrossRef Eastwell KC, Dutoit LJ, Druffel KL (2009) Helleborus net necrosis virus: a new Carlavirus associated with ‘black death’ of Helleborus spp. Plant Dis 93:332–338CrossRef
12.
go back to reference Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95–98 Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95–98
13.
go back to reference Higgins D, Thompson J, Gibson T, Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22:4673–4680CrossRefPubMed Higgins D, Thompson J, Gibson T, Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22:4673–4680CrossRefPubMed
14.
go back to reference Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Bio Evol 28:2731–2739CrossRef Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Bio Evol 28:2731–2739CrossRef
15.
go back to reference Li R, Mock R (2008) Characterization of a flowering cherry strain of Cherry necrotic rusty mottle virus. Arch Virol 153:973–978CrossRefPubMed Li R, Mock R (2008) Characterization of a flowering cherry strain of Cherry necrotic rusty mottle virus. Arch Virol 153:973–978CrossRefPubMed
16.
go back to reference Verchot-Lubicz J, Ye C-M, Bamunusinghe D (2007) Molecular biology of potexviruses: recent advances. J Gen Virol 88:1643–1655CrossRefPubMed Verchot-Lubicz J, Ye C-M, Bamunusinghe D (2007) Molecular biology of potexviruses: recent advances. J Gen Virol 88:1643–1655CrossRefPubMed
17.
go back to reference White KA, Bancroft JB, Mackie GA (1992) Mutagenesis of a hexanucleotide sequence conserved in potexvirus RNAs. Virology 189:817–820CrossRefPubMed White KA, Bancroft JB, Mackie GA (1992) Mutagenesis of a hexanucleotide sequence conserved in potexvirus RNAs. Virology 189:817–820CrossRefPubMed
18.
go back to reference Gentit P, Foissac X, Svanella-Dumas L, Peypelut M, Macquaire G, Candresse T (2002) Molecular characterization of foveaviruses associated with cherry necrotic mottle leaf disease and complete sequencing of an European isolate of cherry green ring mottle virus. Arch Virol 147:1033–1042CrossRefPubMed Gentit P, Foissac X, Svanella-Dumas L, Peypelut M, Macquaire G, Candresse T (2002) Molecular characterization of foveaviruses associated with cherry necrotic mottle leaf disease and complete sequencing of an European isolate of cherry green ring mottle virus. Arch Virol 147:1033–1042CrossRefPubMed
19.
go back to reference Morozov SY, Solovyev AG (2003) Triple gene block: modular design of a multifunctional machine for plant virus movement. J Gen Virol 84:1351–1366CrossRefPubMed Morozov SY, Solovyev AG (2003) Triple gene block: modular design of a multifunctional machine for plant virus movement. J Gen Virol 84:1351–1366CrossRefPubMed
20.
go back to reference Dolja VV, Boyko VP, Agranovsky AA, Koonin EV (1991) Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: two families with distinct patterns of sequences and probably structure conservation. Virology 184:79–86CrossRefPubMed Dolja VV, Boyko VP, Agranovsky AA, Koonin EV (1991) Phylogeny of capsid proteins of rod-shaped and filamentous RNA plant viruses: two families with distinct patterns of sequences and probably structure conservation. Virology 184:79–86CrossRefPubMed
21.
go back to reference Martelli GP, Adams MJ, Kreuze JF, Dolja VV (2007) Family Flexiviridae: a case study in virion and genome plasticity. Annu Rev Phytopathol 45:73–100CrossRefPubMed Martelli GP, Adams MJ, Kreuze JF, Dolja VV (2007) Family Flexiviridae: a case study in virion and genome plasticity. Annu Rev Phytopathol 45:73–100CrossRefPubMed
22.
go back to reference Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 26(19):2462–2463CrossRefPubMed Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 26(19):2462–2463CrossRefPubMed
23.
go back to reference Komatsu K, Yamaji Y, Ozeki J, Hashimoto M, Kagiwada S, Takahashi S, Namba S (2008) Nucleotide sequence analysis of seven Japanese isolates of Plantago asiatica mosaic virus (PIAMV): a unique potexvirus with significantly high genomic and biological variability within the species. Arch Virol 153:193–198CrossRefPubMed Komatsu K, Yamaji Y, Ozeki J, Hashimoto M, Kagiwada S, Takahashi S, Namba S (2008) Nucleotide sequence analysis of seven Japanese isolates of Plantago asiatica mosaic virus (PIAMV): a unique potexvirus with significantly high genomic and biological variability within the species. Arch Virol 153:193–198CrossRefPubMed
Metadata
Title
Complete nucleotide sequence of a virus associated with rusty mottle disease of sweet cherry (Prunus avium)
Authors
D. V. Villamor
K. L. Druffel
K. C. Eastwell
Publication date
01-08-2013
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 8/2013
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-013-1668-9

Other articles of this Issue 8/2013

Archives of Virology 8/2013 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.