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Archives of Virology
Published in: Archives of Virology 4/2017

01-04-2017 | Annotated Sequence Record

Complete nucleotide sequence of a novel strain of fig fleck-associated virus from China

Authors: Zhen He, Mahmut Mijit, Shifang Li, Zhixiang Zhang

Published in: Archives of Virology | Issue 4/2017

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Abstract

The complete nucleotide sequence of fig fleck-associated virus from Xinjiang Uygur Autonomous Region of China (FFkaV-CN) was determined. The 6,723-nucleotide-long viral genome, excluding a terminal poly(A) tail, contains three open reading frames (ORFs). Pairwise comparisons showed that FFkaV-CN shares 83% and 92% sequence identity with FFkaV-Italy based on the complete genomic sequence and CP aa sequence, respectively, slightly higher than the species demarcation criterion for the genus Maculavirus. Phylogenetic analysis showed that FFkaV-CN and FFkaV-Italy clustered into one group. These results indicate that FFkaV-CN is a novel strain of FFkaV with a genome organization somewhat different from what was reported for FFkaV-Italy.
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Metadata
Title
Complete nucleotide sequence of a novel strain of fig fleck-associated virus from China
Authors
Zhen He
Mahmut Mijit
Shifang Li
Zhixiang Zhang
Publication date
01-04-2017
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 4/2017
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-016-3204-1

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