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Archives of Virology
Published in: Archives of Virology 9/2012

01-09-2012 | Annotated Sequence Record

Complete nucleotide sequence of a new strain of grapevine leafroll-associated virus 3 in South Africa

Authors: R. Bester, H. J. Maree, J. T. Burger

Published in: Archives of Virology | Issue 9/2012

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Abstract

The complete genome sequences of two newly identified genetic variants of grapevine leafroll-associated virus 3 (GLRaV-3) are described. Two isolates, GH11 (18671 nt) and GH30 (18576 nt) were sequenced and found to be less than 70 % similar to other South African GLRaV-3 variants. The genome organization of GH11 and GH30 is similar to that of previously described GLRaV-3 isolates. However, no corresponding open reading frame 2 (ORF2) could be identified. Phylogenetic analysis indicates that GH11 and GH30 cluster in a subgroup (group VI) that is separate from the previously described GLRaV-3 isolates and should be regarded as a different strain of GLRaV-3.
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Metadata
Title
Complete nucleotide sequence of a new strain of grapevine leafroll-associated virus 3 in South Africa
Authors
R. Bester
H. J. Maree
J. T. Burger
Publication date
01-09-2012
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 9/2012
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-012-1333-8

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