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Published in: Diagnostic Pathology 1/2008

Open Access 01-12-2008 | Proceedings

Automated region of interest retrieval and classification using spectral analysis

Authors: Myriam Oger, Philippe Belhomme, Jacques Klossa, Jean-Jacques Michels, Abderrahim Elmoataz

Published in: Diagnostic Pathology | Special Issue 1/2008

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Abstract

Efficient use of whole slide imaging in pathology needs automated region of interest (ROI) retrieval and classification, through the use of image analysis and data sorting tools. One possible method for data sorting uses Spectral Analysis for Dimensionality Reduction. We present some interesting results in the field of histopathology and cytohematology.
In histopathology, we developed a Computer-Aided Diagnosis system applied to low-resolution images representing the totality of histological breast tumour sections. The images can be digitized directly at low resolution or be obtained from sub-sampled high-resolution virtual slides. Spectral Analysis is used (1) for image segmentation (stroma, tumour epithelium), by determining a «distance» between all the images of the database, (2) for choosing representative images and characteristic patterns of each histological type in order to index them, and (3) for visualizing images or features similar to a sample provided by the pathologist.
In cytohematology, we studied a blood smear virtual slide acquired through high resolution oil scanning and Spectral Analysis is used to sort selected nucleated blood cell classes so that the pathologist may easily focus on specific classes whose morphology could then be studied more carefully or which can be analyzed through complementary instruments, like Multispectral Imaging or Raman MicroSpectroscopy.
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Metadata
Title
Automated region of interest retrieval and classification using spectral analysis
Authors
Myriam Oger
Philippe Belhomme
Jacques Klossa
Jean-Jacques Michels
Abderrahim Elmoataz
Publication date
01-12-2008
Publisher
BioMed Central
Published in
Diagnostic Pathology / Issue Special Issue 1/2008
Electronic ISSN: 1746-1596
DOI
https://doi.org/10.1186/1746-1596-3-S1-S17

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