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Published in: Archives of Virology 5/2013

01-05-2013 | Brief Report

A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix

Authors: Yu-Hsin Lin, Sakae Hisano, Hajime Yaegashi, Satoko Kanematsu, Nobuhiro Suzuki

Published in: Archives of Virology | Issue 5/2013

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Excerpt

We report the biological and molecular characterisation of a second quadrivirus strain termed Rosellinia necatrix quadrivirus 1 strain W1118 (RnQV1-W1118) from the ascomycete white root rot fungus. Commonalities with the first quadrivirus (RnQV1-W1075) include its quadripartite genome structure, spherical particle morphology, sequence heterogeneity in the extreme terminal end, 72–82% sequence identity between the corresponding proteins, and its ability to cause a latent infection. Distinguishing features include different conserved terminal sequences and the degree of susceptibility of two major capsid proteins to proteolytic degradation, which is thought to occur during virion purification. Identification of this second quadrivirus strain strengthens our earlier proposal that “Rosellinia necatrix quadrivirus 1” should be considered the type species of a novel family, “Quadriviridae”. …
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Literature
1.
go back to reference Al Rwahnih M, Daubert S, Urbez-Torres JR, Cordero F, Rowhani A (2011) Deep sequencing evidence from single grapevine plants reveals a virome dominated by mycoviruses. Arch Virol 156:397–403PubMedCrossRef Al Rwahnih M, Daubert S, Urbez-Torres JR, Cordero F, Rowhani A (2011) Deep sequencing evidence from single grapevine plants reveals a virome dominated by mycoviruses. Arch Virol 156:397–403PubMedCrossRef
2.
go back to reference Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402PubMedCrossRef Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402PubMedCrossRef
3.
go back to reference Aoki N, Moriyama H, Kodama M, Arie T, Teraoka T, Fukuhara T (2009) A novel mycovirus associated with four double-stranded RNAs affects host fungal growth in Alternaria alternata. Virus Res 140:179–187PubMedCrossRef Aoki N, Moriyama H, Kodama M, Arie T, Teraoka T, Fukuhara T (2009) A novel mycovirus associated with four double-stranded RNAs affects host fungal growth in Alternaria alternata. Virus Res 140:179–187PubMedCrossRef
4.
go back to reference Chiba S, Salaipeth L, Lin YH, Sasaki A, Kanematsu S, Suzuki N (2009) A novel bipartite double-stranded RNA mycovirus from the white root rot fungus Rosellinia necatrix: molecular and biological characterization, taxonomic considerations, and potential for biological control. J Virol 83:12801–12812PubMedCrossRef Chiba S, Salaipeth L, Lin YH, Sasaki A, Kanematsu S, Suzuki N (2009) A novel bipartite double-stranded RNA mycovirus from the white root rot fungus Rosellinia necatrix: molecular and biological characterization, taxonomic considerations, and potential for biological control. J Virol 83:12801–12812PubMedCrossRef
5.
go back to reference Chiba S, Kondo H, Tani A, Saisho D, Sakamoto W, Kanematsu S, Suzuki N (2011) Widespread endogenization of genome sequences of non-retroviral RNA viruses into plant genomes. PLoS Pathog 7:e1002146PubMedCrossRef Chiba S, Kondo H, Tani A, Saisho D, Sakamoto W, Kanematsu S, Suzuki N (2011) Widespread endogenization of genome sequences of non-retroviral RNA viruses into plant genomes. PLoS Pathog 7:e1002146PubMedCrossRef
6.
go back to reference Covelli L, Coutts RH, Di Serio F, Citir A, Acikgoz S, Hernandez C, Ragozzino A, Flores R (2004) Cherry chlorotic rusty spot and Amasya cherry diseases are associated with a complex pattern of mycoviral-like double-stranded RNAs. I. Characterization of a new species in the genus Chrysovirus. J Gen Virol 85:3389–3397PubMedCrossRef Covelli L, Coutts RH, Di Serio F, Citir A, Acikgoz S, Hernandez C, Ragozzino A, Flores R (2004) Cherry chlorotic rusty spot and Amasya cherry diseases are associated with a complex pattern of mycoviral-like double-stranded RNAs. I. Characterization of a new species in the genus Chrysovirus. J Gen Virol 85:3389–3397PubMedCrossRef
7.
go back to reference Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A (2008) The Pfam protein families database. Nucleic Acids Res 36:D281–D288PubMedCrossRef Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A (2008) The Pfam protein families database. Nucleic Acids Res 36:D281–D288PubMedCrossRef
8.
9.
go back to reference Jiang D, Ghabrial SA (2004) Molecular characterization of Penicillium chrysogenum virus: reconsideration of the taxonomy of the genus Chrysovirus. J Gen Virol 85:2111–2121PubMedCrossRef Jiang D, Ghabrial SA (2004) Molecular characterization of Penicillium chrysogenum virus: reconsideration of the taxonomy of the genus Chrysovirus. J Gen Virol 85:2111–2121PubMedCrossRef
10.
go back to reference Kanematsu S, Arakawa M, Oikawa Y, Onoue M, Osaki H, Nakamura H, Ikeda K, Kuga-Uetake Y, Nitta H, Sasaki A, Suzaki K, Yoshida K, Matsumoto N (2004) A Reovirus causes hypovirulence of Rosellinia necatrix. Phytopathology 94:561–568PubMedCrossRef Kanematsu S, Arakawa M, Oikawa Y, Onoue M, Osaki H, Nakamura H, Ikeda K, Kuga-Uetake Y, Nitta H, Sasaki A, Suzaki K, Yoshida K, Matsumoto N (2004) A Reovirus causes hypovirulence of Rosellinia necatrix. Phytopathology 94:561–568PubMedCrossRef
11.
go back to reference Kondo H, Chiba S, Sasaki A, Kanematsu S, Suzuki N (2012) Evidence for negative-strand RNA virus infection in fungi. Virology (under revision) Kondo H, Chiba S, Sasaki A, Kanematsu S, Suzuki N (2012) Evidence for negative-strand RNA virus infection in fungi. Virology (under revision)
12.
go back to reference Kondo H, Kanematsu S, Suzuki N (2013) Viruses of the white root rot fungus, Rosellinia necatrix. Adv Virus Res (in press) Kondo H, Kanematsu S, Suzuki N (2013) Viruses of the white root rot fungus, Rosellinia necatrix. Adv Virus Res (in press)
13.
14.
go back to reference Lin YH, Chiba S, Tani A, Kondo H, Sasaki A, Kanematsu S, Suzuki N (2012) A novel quadripartite dsRNA virus isolated from a phytopathogenic filamentous fungus, Rosellinia necatrix. Virology 426:42–50PubMedCrossRef Lin YH, Chiba S, Tani A, Kondo H, Sasaki A, Kanematsu S, Suzuki N (2012) A novel quadripartite dsRNA virus isolated from a phytopathogenic filamentous fungus, Rosellinia necatrix. Virology 426:42–50PubMedCrossRef
15.
go back to reference Liu H, Fu Y, Jiang D, Li G, Xie J, Peng Y, Yi X, Ghabrial SA (2009) A novel mycovirus that is related to the human pathogen hepatitis E virus and rubi-like viruses. J Virol 83:1981–1991PubMedCrossRef Liu H, Fu Y, Jiang D, Li G, Xie J, Peng Y, Yi X, Ghabrial SA (2009) A novel mycovirus that is related to the human pathogen hepatitis E virus and rubi-like viruses. J Virol 83:1981–1991PubMedCrossRef
16.
go back to reference Nuss DL (2005) Hypovirulence: mycoviruses at the fungal-plant interface. Nat Rev Microbiol 3:632–642PubMedCrossRef Nuss DL (2005) Hypovirulence: mycoviruses at the fungal-plant interface. Nat Rev Microbiol 3:632–642PubMedCrossRef
17.
go back to reference Pearson MN, Beever RE, Boine B, Arthur K (2009) Mycoviruses of filamentous fungi and their relevance to plant pathology. Mol Plant Pathol 10:115–128PubMedCrossRef Pearson MN, Beever RE, Boine B, Arthur K (2009) Mycoviruses of filamentous fungi and their relevance to plant pathology. Mol Plant Pathol 10:115–128PubMedCrossRef
18.
go back to reference Pliego C, Kanematsu S, Ruano-Rosa D, de Vicente A, Lopez-Herrera C, Cazorla FM, Ramos C (2009) GFP sheds light on the infection process of avocado roots by Rosellinia necatrix. Fungal Genet Biol 46:137–145PubMedCrossRef Pliego C, Kanematsu S, Ruano-Rosa D, de Vicente A, Lopez-Herrera C, Cazorla FM, Ramos C (2009) GFP sheds light on the infection process of avocado roots by Rosellinia necatrix. Fungal Genet Biol 46:137–145PubMedCrossRef
19.
go back to reference Pliego C, Lopez-Herrera C, Ramos C, Cazorla FM (2012) Developing tools to unravel the biological secrets of Rosellinia necatrix, an emergent threat to woody crops. Mol Plant Pathol 13:226–239PubMedCrossRef Pliego C, Lopez-Herrera C, Ramos C, Cazorla FM (2012) Developing tools to unravel the biological secrets of Rosellinia necatrix, an emergent threat to woody crops. Mol Plant Pathol 13:226–239PubMedCrossRef
20.
go back to reference Sasaki A, Miyanishi M, Ozaki K, Onoue M, Yoshida K (2005) Molecular characterization of a partitivirus from the plant pathogenic ascomycete Rosellinia necatrix. Arch Virol 150:1069–1083PubMedCrossRef Sasaki A, Miyanishi M, Ozaki K, Onoue M, Yoshida K (2005) Molecular characterization of a partitivirus from the plant pathogenic ascomycete Rosellinia necatrix. Arch Virol 150:1069–1083PubMedCrossRef
21.
go back to reference Sasaki A, Kanematsu S, Onoue M, Oyama Y, Yoshida K (2006) Infection of Rosellinia necatrix with purified viral particles of a member of Partitiviridae (RnPV1-W8). Arch Virol 151:697–707PubMedCrossRef Sasaki A, Kanematsu S, Onoue M, Oyama Y, Yoshida K (2006) Infection of Rosellinia necatrix with purified viral particles of a member of Partitiviridae (RnPV1-W8). Arch Virol 151:697–707PubMedCrossRef
22.
go back to reference Sasaki A, Kanematsu S, Onoue M, Oikawa Y, Nakamura H, Yoshida K (2007) Artificial infection of Rosellinia necatrix with purified viral particles of a member of the genus Mycoreovirus reveals its uneven distribution in single colonies. Phytopathology 97:278–286PubMedCrossRef Sasaki A, Kanematsu S, Onoue M, Oikawa Y, Nakamura H, Yoshida K (2007) Artificial infection of Rosellinia necatrix with purified viral particles of a member of the genus Mycoreovirus reveals its uneven distribution in single colonies. Phytopathology 97:278–286PubMedCrossRef
23.
go back to reference Shimizu T, Ito T, Kanematsu S (2012) Transient and multivariate system for transformation of a fungal plant pathogen, Rosellinia necatrix, using autonomously replicating vectors. Curr Genet 58:129–138PubMedCrossRef Shimizu T, Ito T, Kanematsu S (2012) Transient and multivariate system for transformation of a fungal plant pathogen, Rosellinia necatrix, using autonomously replicating vectors. Curr Genet 58:129–138PubMedCrossRef
24.
go back to reference Sun L, Suzuki N (2008) Intragenic rearrangements of a mycoreovirus induced by the multifunctional protein p29 encoded by the prototypic hypovirus CHV1-EP713. RNA 14:2557–2571PubMedCrossRef Sun L, Suzuki N (2008) Intragenic rearrangements of a mycoreovirus induced by the multifunctional protein p29 encoded by the prototypic hypovirus CHV1-EP713. RNA 14:2557–2571PubMedCrossRef
25.
go back to reference Suzuki N, Supyani S, Maruyama K, Hillman BI (2004) Complete genome sequence of Mycoreovirus-1/Cp9B21, a member of a novel genus within the family Reoviridae, isolated from the chestnut blight fungus Cryphonectria parasitica. J Gen Virol 85:3437–3448PubMedCrossRef Suzuki N, Supyani S, Maruyama K, Hillman BI (2004) Complete genome sequence of Mycoreovirus-1/Cp9B21, a member of a novel genus within the family Reoviridae, isolated from the chestnut blight fungus Cryphonectria parasitica. J Gen Virol 85:3437–3448PubMedCrossRef
26.
go back to reference Tavantzis S (2008) Partitiviruses of fungi. In: Mahy BWJ, Van Regenmortel MHV (eds) Encyclopedia of virology, 3rd edn. Elsevier, Oxford, pp 63–68CrossRef Tavantzis S (2008) Partitiviruses of fungi. In: Mahy BWJ, Van Regenmortel MHV (eds) Encyclopedia of virology, 3rd edn. Elsevier, Oxford, pp 63–68CrossRef
27.
go back to reference Urayama S, Kato S, Suzuki Y, Aoki N, Le MT, Arie T, Teraoka T, Fukuhara T, Moriyama H (2010) Mycoviruses related to chrysovirus affect vegetative growth in the rice blast fungus Magnaporthe oryzae. J Gen Virol 91:3085–3094PubMedCrossRef Urayama S, Kato S, Suzuki Y, Aoki N, Le MT, Arie T, Teraoka T, Fukuhara T, Moriyama H (2010) Mycoviruses related to chrysovirus affect vegetative growth in the rice blast fungus Magnaporthe oryzae. J Gen Virol 91:3085–3094PubMedCrossRef
28.
go back to reference Wei CZ, Osaki H, Iwanami T, Matsumoto N, Ohtsu Y (2004) Complete nucleotide sequences of genome segments 1 and 3 of Rosellinia anti-rot virus in the family Reoviridae. Arch Virol 149:773–777PubMedCrossRef Wei CZ, Osaki H, Iwanami T, Matsumoto N, Ohtsu Y (2004) Complete nucleotide sequences of genome segments 1 and 3 of Rosellinia anti-rot virus in the family Reoviridae. Arch Virol 149:773–777PubMedCrossRef
29.
go back to reference Yaegashi H, Sawahata T, Ito T, Kanematsu S (2011) A novel colony-print immunoassay reveals differential patterns of distribution and horizontal transmission of four unrelated mycoviruses in Rosellinia necatrix. Virology 409:280–289PubMedCrossRef Yaegashi H, Sawahata T, Ito T, Kanematsu S (2011) A novel colony-print immunoassay reveals differential patterns of distribution and horizontal transmission of four unrelated mycoviruses in Rosellinia necatrix. Virology 409:280–289PubMedCrossRef
30.
go back to reference Yu X, Li B, Fu Y, Jiang D, Ghabrial SA, Li G, Peng Y, Xie J, Cheng J, Huang J, Yi X (2010) A geminivirus-related DNA mycovirus that confers hypovirulence to a plant pathogenic fungus. Proc Natl Acad Sci USA 107:8387–8392PubMedCrossRef Yu X, Li B, Fu Y, Jiang D, Ghabrial SA, Li G, Peng Y, Xie J, Cheng J, Huang J, Yi X (2010) A geminivirus-related DNA mycovirus that confers hypovirulence to a plant pathogenic fungus. Proc Natl Acad Sci USA 107:8387–8392PubMedCrossRef
Metadata
Title
A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix
Authors
Yu-Hsin Lin
Sakae Hisano
Hajime Yaegashi
Satoko Kanematsu
Nobuhiro Suzuki
Publication date
01-05-2013
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 5/2013
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-012-1580-8

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