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Published in: BMC Infectious Diseases 1/2024

Open Access 01-12-2024 | Vancomycin | Research

Antimicrobial resistance markers distribution in Staphylococcus aureus from Nsukka, Nigeria

Authors: Martina C. Agbo, Ifeoma M. Ezeonu, Beatrice O. Onodagu, Chukwuemeka C. Ezeh, Chizoba A. Ozioko, Stephen C. Emencheta

Published in: BMC Infectious Diseases | Issue 1/2024

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Abstract

Background

Multidrug resistance in Staphylococcus aureus continues to influence treatment complications in clinical settings globally. Multidrug-resistant-S. aureus (MDR-SA) is often genetically driven by resistance markers transferable in pathogenic strains. This study aimed to determine the distribution of resistance markers in clinical isolates of S. aureus in Nsukka, Nigeria.

Methods

A total of 154 clinical samples were cultured on mannitol salt agar. Isolates were characterized using conventional cultural techniques and confirmed by PCR detection of S. aureus-specific nuc gene. Antibiotic resistance profiles of the isolates were determined against selected antibiotics using the disk-diffusion method, while screening for antibiotic resistance genes (Mec A, Erm A, Erm B, Erm C, Van A, and Van B) was by PCR.

Results

A total of 98 isolates were identified as S. aureus by conventional methods. Of these, 70 (71.43%) were confirmed by PCR. Phenotypically, the isolates exhibited high degrees of resistance to oxacillin (95.72%), erythromycin (81.63%), and ertapenem (78.57%) and 75.51% and 47.30% against methicillin and vancomycin, respectively. Multiple antibiotic resistance indexes of the isolates ranged from 0.3 to 1, and the most prevalent pattern of resistance was oxacillin-ertapenem-vancomycin-erythromycin-azithromycin-clarithromycin-ciprofloxacin- cefoxitin-amoxicillin-clavulanic acid. PCR screening confirmed the existence of various antibiotic resistance makers among the strains, with the most common resistance genes found in the isolates being Mec A (32.14%), Van A (21.43%), Van B (10.71%), Erm B (10.71%), and Erm C (17.86%). None possessed the Erm A gene.

Conclusion

The study supports the need for necessary action, including rational drug use, continuous surveillance, and deployment of adequate preventive and curative policies and actions.
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Literature
3.
go back to reference Ndihokubwayo JB, Yahaya AH, Desta AT, Ki-Zerbo G, Odei EA, Keita B, et al. Antimicrobial resistance in the African Region: issues, challenges and actions proposed. Volume 16. WHO Regional Office for Africa; 2013. pp. 27–30. Ndihokubwayo JB, Yahaya AH, Desta AT, Ki-Zerbo G, Odei EA, Keita B, et al. Antimicrobial resistance in the African Region: issues, challenges and actions proposed. Volume 16. WHO Regional Office for Africa; 2013. pp. 27–30.
4.
go back to reference Tadesse BT, Ashley EA, Ongarello S, Havumaki J, Wijegoonewardena M, González IJ, et al. Antimicrob Resist Africa: Syst Rev BMC Infect Dis. 2017;17:616. Tadesse BT, Ashley EA, Ongarello S, Havumaki J, Wijegoonewardena M, González IJ, et al. Antimicrob Resist Africa: Syst Rev BMC Infect Dis. 2017;17:616.
5.
go back to reference Saleem N, Nawaz M, Ghafoor A, Javeed A, Mustafa A, Yousuf MR, et al. Phenotypic and Molecular Analysis of Antibiotic Resistance in Lactobacilli of Poultry origin from Lahore, Pakistan. Pak Vet J. 2018;38(4):409–13.CrossRef Saleem N, Nawaz M, Ghafoor A, Javeed A, Mustafa A, Yousuf MR, et al. Phenotypic and Molecular Analysis of Antibiotic Resistance in Lactobacilli of Poultry origin from Lahore, Pakistan. Pak Vet J. 2018;38(4):409–13.CrossRef
6.
go back to reference Chen CJ, Huang YC. New epidemiology of Staphylococcus aureus infection in Asia. Clin Microbiol Infect. 2014;20:605–23.CrossRefPubMed Chen CJ, Huang YC. New epidemiology of Staphylococcus aureus infection in Asia. Clin Microbiol Infect. 2014;20:605–23.CrossRefPubMed
7.
go back to reference Tong SY, Davis JS, Eichenberger E, Holland TL, Fowler VG. Staphylococcus aureus infections: Epidemiology, pathophysiology, clinical manifestation, and management. Clin Microbiol Rev. 2015;28:603–11.CrossRefPubMedPubMedCentral Tong SY, Davis JS, Eichenberger E, Holland TL, Fowler VG. Staphylococcus aureus infections: Epidemiology, pathophysiology, clinical manifestation, and management. Clin Microbiol Rev. 2015;28:603–11.CrossRefPubMedPubMedCentral
8.
go back to reference Kandemir O, Oztuna V, Colak M, Akdag A, Camdeviren H. Comparison of the efficacy of tigecycline and teicoplanin in an experimental methicillin–resistant Staphylococcus aureus osteomyelitis mode. J Chemother. 2008;20:53–7.CrossRefPubMed Kandemir O, Oztuna V, Colak M, Akdag A, Camdeviren H. Comparison of the efficacy of tigecycline and teicoplanin in an experimental methicillin–resistant Staphylococcus aureus osteomyelitis mode. J Chemother. 2008;20:53–7.CrossRefPubMed
9.
go back to reference McGuinness WA, Malachowa N, Deleo FR. Vancomycin resistance in Staphylococcus aureus. J Bio Med. 2017;90(2):269–81. McGuinness WA, Malachowa N, Deleo FR. Vancomycin resistance in Staphylococcus aureus. J Bio Med. 2017;90(2):269–81.
12.
go back to reference Al-Amery K, Elhariri M, Elsayed A, EI-Moghazy G, Elhelw R, EI-Mahallawy H, et al. Vancomycin-resistant Staphylococcus aureus isolated from Camel meat and slaughterhouse workers in Egypt. Antimicrob Resist Infect Control. 2019;8:129: 2–8.CrossRef Al-Amery K, Elhariri M, Elsayed A, EI-Moghazy G, Elhelw R, EI-Mahallawy H, et al. Vancomycin-resistant Staphylococcus aureus isolated from Camel meat and slaughterhouse workers in Egypt. Antimicrob Resist Infect Control. 2019;8:129: 2–8.CrossRef
14.
go back to reference Goudarzi M, Seyedjavadi SS, Nasiri MJ, Goudarzi H, Nia RS, Dabiri H. Molecular characterization of Methicillin-resistant Staphylococcus aureus (MRSA) strains isolated from patients with bacteraemia based on MLS, SCCmec,Spa, and agr locus type analysis. Microb Pathog. 2017;104:328–35.CrossRefPubMed Goudarzi M, Seyedjavadi SS, Nasiri MJ, Goudarzi H, Nia RS, Dabiri H. Molecular characterization of Methicillin-resistant Staphylococcus aureus (MRSA) strains isolated from patients with bacteraemia based on MLS, SCCmec,Spa, and agr locus type analysis. Microb Pathog. 2017;104:328–35.CrossRefPubMed
15.
go back to reference CLSI., Performance Standards for antimicrobial Susceptibility testing: CLSI Supplement M100S; Clinical and Laboratory Standards Institute Wayne, PA, USA. 2016. CLSI., Performance Standards for antimicrobial Susceptibility testing: CLSI Supplement M100S; Clinical and Laboratory Standards Institute Wayne, PA, USA. 2016.
16.
go back to reference CLSI., Performance Standards for antimicrobial Susceptibility testing: CLSI Supplement M100S; Clinical and Laboratory Standards Institute Wayne, PA, USA. 2018. CLSI., Performance Standards for antimicrobial Susceptibility testing: CLSI Supplement M100S; Clinical and Laboratory Standards Institute Wayne, PA, USA. 2018.
17.
19.
go back to reference Strommenger B, Kettlitz C, Werner G, Witte W. Multiplex PCR assay for simultaneous detection of nine clinically relevant antibiotic resistance genes in Staphylococcus aureus. J Clin Microbiol. 2003;41(9):4089–94.CrossRefPubMedPubMedCentral Strommenger B, Kettlitz C, Werner G, Witte W. Multiplex PCR assay for simultaneous detection of nine clinically relevant antibiotic resistance genes in Staphylococcus aureus. J Clin Microbiol. 2003;41(9):4089–94.CrossRefPubMedPubMedCentral
20.
go back to reference Aziman A, Havaei SA, Fazeli H, Naderi M, Ghazvini K, Samiee SM, et al. Genetic characterization of a Vancomycin-resistant Staphylococcus aureus isolates from the respiratory tract of a patient in a University hospital in North eastern Iran. J Clin Microbiol. 2012;50(11):3581–5.CrossRef Aziman A, Havaei SA, Fazeli H, Naderi M, Ghazvini K, Samiee SM, et al. Genetic characterization of a Vancomycin-resistant Staphylococcus aureus isolates from the respiratory tract of a patient in a University hospital in North eastern Iran. J Clin Microbiol. 2012;50(11):3581–5.CrossRef
21.
go back to reference Saadat S, solhjoo K, Norooz-Nejad MJ, Kazemi A. VanA and VanB positive Vancomycin-resistant S. aureus among clinical isolates in Shiraz, South of Iran. Oman Med J. 2014;29:335.CrossRefPubMedPubMedCentral Saadat S, solhjoo K, Norooz-Nejad MJ, Kazemi A. VanA and VanB positive Vancomycin-resistant S. aureus among clinical isolates in Shiraz, South of Iran. Oman Med J. 2014;29:335.CrossRefPubMedPubMedCentral
22.
go back to reference Goudarzi GR, Tahmasbi F, Anbari K, Ghafarzadeh M. The prevalence of Macrolide-resistant genes among Staphylococci isolated from the nasal cavity of hospital employees in Khorrramabad, Iran. Iran Red. Cres Med J. 2016;18(2):e25701. Goudarzi GR, Tahmasbi F, Anbari K, Ghafarzadeh M. The prevalence of Macrolide-resistant genes among Staphylococci isolated from the nasal cavity of hospital employees in Khorrramabad, Iran. Iran Red. Cres Med J. 2016;18(2):e25701.
23.
go back to reference Khoshnood S, Shahi F, Jomehzadeh N, Montazeri EA, Saki M, Mortazavi SM, et al. Distribution of genes encoding resistance to Macrolides, Lincosamides, and Streptogramins among Methicillin–resistant Staphylococcus aureus strains isolated from burn patients. Acta Microbiol et Immunoloica Hungarica. 2019;66(3):387–98.CrossRef Khoshnood S, Shahi F, Jomehzadeh N, Montazeri EA, Saki M, Mortazavi SM, et al. Distribution of genes encoding resistance to Macrolides, Lincosamides, and Streptogramins among Methicillin–resistant Staphylococcus aureus strains isolated from burn patients. Acta Microbiol et Immunoloica Hungarica. 2019;66(3):387–98.CrossRef
24.
go back to reference Maalik A, Ali S, Anam Iftikhar MR, Ahmad H, Khan I. Prevalence and antibiotic resistance of Staphylococcus aureus and Risk factors for bovine subclinical mastitis in District Kasur, Punjab, Pakistan. Pak J Zoo. 2019;51:1123–30.CrossRef Maalik A, Ali S, Anam Iftikhar MR, Ahmad H, Khan I. Prevalence and antibiotic resistance of Staphylococcus aureus and Risk factors for bovine subclinical mastitis in District Kasur, Punjab, Pakistan. Pak J Zoo. 2019;51:1123–30.CrossRef
26.
go back to reference Khanal LK, Jha BK. Prevalence of methicillin-resistant S. Aureus (MRSA) among skin infection cases at a hospital in Chitwai, Nepal. Nepal Med Coll J. 2010;12(4):224–8.PubMed Khanal LK, Jha BK. Prevalence of methicillin-resistant S. Aureus (MRSA) among skin infection cases at a hospital in Chitwai, Nepal. Nepal Med Coll J. 2010;12(4):224–8.PubMed
27.
go back to reference Rossato AM, Primon-Barros M, Rocha L, Reiter KC, Dias CAG. Alves D’ Azevedo P. Resistance profile to antimicrobials agents in methicillin-resistant S. Aureus isolated from hospitals in South Brazil between 2014–2019. J Braz Soc Trop Med. 2020;53(e2020431):1–10. Rossato AM, Primon-Barros M, Rocha L, Reiter KC, Dias CAG. Alves D’ Azevedo P. Resistance profile to antimicrobials agents in methicillin-resistant S. Aureus isolated from hospitals in South Brazil between 2014–2019. J Braz Soc Trop Med. 2020;53(e2020431):1–10.
28.
go back to reference Sharama C, Rokana N, Chandra M, Singh BP, Gullhance RD, Gill TPS, et al. Antimicrobial resistance: its Surveillance, Impact and Alternative Management strategies in dairy animals. Front Vet Sci. 2018;237(4):1–27. Sharama C, Rokana N, Chandra M, Singh BP, Gullhance RD, Gill TPS, et al. Antimicrobial resistance: its Surveillance, Impact and Alternative Management strategies in dairy animals. Front Vet Sci. 2018;237(4):1–27.
29.
go back to reference Baddour MM, AbuEIheir MM, Fatani AJ. Comparison of mecA polymerase chain reaction with phenotypic methods for the detection of methicillin-resistant S. Aureus Curr. Microbiol. 2007;55:473–9. Baddour MM, AbuEIheir MM, Fatani AJ. Comparison of mecA polymerase chain reaction with phenotypic methods for the detection of methicillin-resistant S. Aureus Curr. Microbiol. 2007;55:473–9.
31.
go back to reference Pournajaf A, Ardebili A, Goudarzi L, Khodabandeh M, Narimani T, Abbazadeh H. PCR-based identification of methicillin-resistant S. aureus strains and their antibiotic resistance profiles. Asi Pacif J Tropic Biomed. 2014;4(suppl 1):293–S297.CrossRef Pournajaf A, Ardebili A, Goudarzi L, Khodabandeh M, Narimani T, Abbazadeh H. PCR-based identification of methicillin-resistant S. aureus strains and their antibiotic resistance profiles. Asi Pacif J Tropic Biomed. 2014;4(suppl 1):293–S297.CrossRef
32.
go back to reference Alghizzi M, Alansari M, Shami A. The prevalence of S. Aureus and Methicillin Resistant S. Aureus in processed food samples in Riyadh, Saudi Arabia. J Pure Appl Microbiol. 2021;15(1):91–9.CrossRef Alghizzi M, Alansari M, Shami A. The prevalence of S. Aureus and Methicillin Resistant S. Aureus in processed food samples in Riyadh, Saudi Arabia. J Pure Appl Microbiol. 2021;15(1):91–9.CrossRef
33.
go back to reference Khashesi R, Malekzadegan Y, Ebrahim-Saraie HS, Razavi Z. Phenotypic and genotypic characterization of Macrolide, Lincosamide and Streptogramin B resistance among clinical isolates of Staphylococci in Southwest of Iran. BMC Res note. 2018;11:711.CrossRef Khashesi R, Malekzadegan Y, Ebrahim-Saraie HS, Razavi Z. Phenotypic and genotypic characterization of Macrolide, Lincosamide and Streptogramin B resistance among clinical isolates of Staphylococci in Southwest of Iran. BMC Res note. 2018;11:711.CrossRef
34.
go back to reference Razeghi M, Saffarian P, Goudarzi M. Incidence of inducible clindamycin resistance and antibacterial resistance genes variability in clinical S. aureus strains: a two- year multicentre study in Tehran Iran. Gen Rep. 2019;16:100411. Razeghi M, Saffarian P, Goudarzi M. Incidence of inducible clindamycin resistance and antibacterial resistance genes variability in clinical S. aureus strains: a two- year multicentre study in Tehran Iran. Gen Rep. 2019;16:100411.
35.
go back to reference Fasihi Y, Saffari F, Kandehkar Ghahraman MRK. Kalantar–Neyestanaki D. Molecular detection of Macrolide and Lincosamide– Resistance genes in clinical methicillin-resistant Staphylococcus aureus isolates from Kerman. Iran Arch Pediatr Infect Dis. 2017;5:e37761. Fasihi Y, Saffari F, Kandehkar Ghahraman MRK. Kalantar–Neyestanaki D. Molecular detection of Macrolide and Lincosamide– Resistance genes in clinical methicillin-resistant Staphylococcus aureus isolates from Kerman. Iran Arch Pediatr Infect Dis. 2017;5:e37761.
36.
go back to reference Faccone D, Togneri AM, Podesta L, Perez M, Gagetti P, Sanchez S, et al. MRSA paediatric clone expressing ermC Plus LnuA genes causing nosocomial transmission and healthcare workers colonization in a neonatal intensive care unit. Infect Genet Evol. 2014;25:78–80.CrossRefPubMed Faccone D, Togneri AM, Podesta L, Perez M, Gagetti P, Sanchez S, et al. MRSA paediatric clone expressing ermC Plus LnuA genes causing nosocomial transmission and healthcare workers colonization in a neonatal intensive care unit. Infect Genet Evol. 2014;25:78–80.CrossRefPubMed
37.
go back to reference Tunkei AR, Hartman BJ, Kaplan SL, Kaufman BA, Roos KL, Scheld WM, et al. Practice guidelines for the management of bacterial meningitis. Clin Infect Dis. 2004;39:1267–84.CrossRef Tunkei AR, Hartman BJ, Kaplan SL, Kaufman BA, Roos KL, Scheld WM, et al. Practice guidelines for the management of bacterial meningitis. Clin Infect Dis. 2004;39:1267–84.CrossRef
38.
go back to reference Karasin G, Bayram Y, Parlak M, Aypak C, Akgül M. Güdücüoğlu the evaluation of Vancomycin–resistant enterococci and carbapenemase producing Klebsiella colonization among ICU– hospitalized patients. Afri Health Scs. 2021;21(4):1662–8.CrossRef Karasin G, Bayram Y, Parlak M, Aypak C, Akgül M. Güdücüoğlu the evaluation of Vancomycin–resistant enterococci and carbapenemase producing Klebsiella colonization among ICU– hospitalized patients. Afri Health Scs. 2021;21(4):1662–8.CrossRef
39.
go back to reference Sarrou S, Malli E, Tsili pounidaki K, Florou Z, Medvecky M, Skoulakis A, et al. MLSB resistant S. aureus in central Greece: rate of resistance and molecular characterization. Microb Drug Res. 2019;25(4):543–50.CrossRef Sarrou S, Malli E, Tsili pounidaki K, Florou Z, Medvecky M, Skoulakis A, et al. MLSB resistant S. aureus in central Greece: rate of resistance and molecular characterization. Microb Drug Res. 2019;25(4):543–50.CrossRef
40.
go back to reference Pekana A, Green E. Antimicrobial Resistance profiles of S. Aureus isolated from meat carcasses and Bovine milk in abattoirs and dairy farm of the Eastern Cape, South Africa. Int J Environ Res Public Health. 2018;15:2223.CrossRefPubMedPubMedCentral Pekana A, Green E. Antimicrobial Resistance profiles of S. Aureus isolated from meat carcasses and Bovine milk in abattoirs and dairy farm of the Eastern Cape, South Africa. Int J Environ Res Public Health. 2018;15:2223.CrossRefPubMedPubMedCentral
41.
go back to reference Gao J, Ferreri M, Liu XQ, Chen IB, Su JI, Han B. Development of Multiplex polymerase chain reaction assay for rapid detection of S. Aureus and selected antibiotic resistance genes in bovine mastitis milk samples. J Vet Diagn Investig. 2011;23:894–901.CrossRef Gao J, Ferreri M, Liu XQ, Chen IB, Su JI, Han B. Development of Multiplex polymerase chain reaction assay for rapid detection of S. Aureus and selected antibiotic resistance genes in bovine mastitis milk samples. J Vet Diagn Investig. 2011;23:894–901.CrossRef
42.
go back to reference Yang F, Wang Q, Wang XR, Wang L, Li X-P, Luo J, et al. Genetic characterization of antimicrobial resistance in S. Aureus isolated from bovine mastitis cases in North West China. J Integr Agric. 2016;15:2542–847.CrossRef Yang F, Wang Q, Wang XR, Wang L, Li X-P, Luo J, et al. Genetic characterization of antimicrobial resistance in S. Aureus isolated from bovine mastitis cases in North West China. J Integr Agric. 2016;15:2542–847.CrossRef
43.
go back to reference Frey Y, Rodriguez JP, Thomann A, Schwendener S, Perreten V. Genetic characterization of antimicrobial resistance in coagulase-negative Staphylococci from bovine mastitis milk. J Dairy Sci. 2013;96:2247–57.CrossRefPubMed Frey Y, Rodriguez JP, Thomann A, Schwendener S, Perreten V. Genetic characterization of antimicrobial resistance in coagulase-negative Staphylococci from bovine mastitis milk. J Dairy Sci. 2013;96:2247–57.CrossRefPubMed
Metadata
Title
Antimicrobial resistance markers distribution in Staphylococcus aureus from Nsukka, Nigeria
Authors
Martina C. Agbo
Ifeoma M. Ezeonu
Beatrice O. Onodagu
Chukwuemeka C. Ezeh
Chizoba A. Ozioko
Stephen C. Emencheta
Publication date
01-12-2024
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2024
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-024-09126-1

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