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Published in: Magnetic Resonance Materials in Physics, Biology and Medicine 5/2014

01-10-2014 | Research Article

Two-dimensional accelerated MP-RAGE imaging with flexible linear reordering

Authors: Daniel Brenner, Rüdiger Stirnberg, Eberhard D. Pracht, Tony Stöcker

Published in: Magnetic Resonance Materials in Physics, Biology and Medicine | Issue 5/2014

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Abstract

Object

Implementation of an accelerated Magnetization Prepared RApid Gradient Echo (MP-RAGE) sequence for T1 weighted neuroimaging; exploiting modern MRI technologies to minimize scan time while preserving the image quality.

Materials and methods

A custom MP-RAGE sequence was implemented on a state-of-the-art 3T MR scanner equipped with a 32-channel receiver array head coil. The sequence utilized a shifted CAIPIRINHA k y k z under-sampling pattern combined with elliptical scanning and a two-dimensional view ordering scheme to achieve high parallel imaging acceleration factors at maintained image contrast.

Results

It could be shown that MP-RAGE accelerated in two k-space directions outperforms single direction acceleration, which is the common practice with standard view ordering. Applying the CAIPIRINHA technique in conjunction with elliptical scanning further increased this benefit.

Conclusion

By combining MP-RAGE with CAIPIRINHA sampling and elliptical scanning, the scan time can be reduced from 4–5 min to 2–3 min with insignificant reduction in image quality.
Literature
1.
go back to reference Mugler JP, Brookeman JR (1990) Three-dimensional magnetization-prepared rapid gradient-echo imaging (3D MP RAGE). Magn Reson Med 15:152–157PubMedCrossRef Mugler JP, Brookeman JR (1990) Three-dimensional magnetization-prepared rapid gradient-echo imaging (3D MP RAGE). Magn Reson Med 15:152–157PubMedCrossRef
2.
go back to reference Jack CR, Bernstein MA, Fox NC, Thompson P, Alexander G, Harvey D, Borowski B, Britson PJ, Whitwell JL, Ward C, Dale AM, Felmlee JP, Gunter JL, Hill DLG, Killiany R, Schuff N, Fox-Bosetti S, Lin C, Studholme C, DeCarli CS, Krueger G, Ward HA, Metzger GJ, Scott KT, Mallozzi R, Blezek D, Levy J, Debbins JP, Fleisher AS, Albert M, Green R, Bartzokis G, Glover G, Mugler J, Weiner MW (2008) The Alzheimer’s disease neuroimaging initiative (ADNI): MRI methods. J Magn Reson Imaging 27:685–691PubMedCrossRefPubMedCentral Jack CR, Bernstein MA, Fox NC, Thompson P, Alexander G, Harvey D, Borowski B, Britson PJ, Whitwell JL, Ward C, Dale AM, Felmlee JP, Gunter JL, Hill DLG, Killiany R, Schuff N, Fox-Bosetti S, Lin C, Studholme C, DeCarli CS, Krueger G, Ward HA, Metzger GJ, Scott KT, Mallozzi R, Blezek D, Levy J, Debbins JP, Fleisher AS, Albert M, Green R, Bartzokis G, Glover G, Mugler J, Weiner MW (2008) The Alzheimer’s disease neuroimaging initiative (ADNI): MRI methods. J Magn Reson Imaging 27:685–691PubMedCrossRefPubMedCentral
3.
go back to reference Glasser MF, Sotiropoulos SN, Wilson JA, Coalson TS, Fischl B, Andersson JL, Xu J, Jbabdi S, Webster M, Polimeni JR, Van Essen DC, Jenkinson M (2013) The minimal preprocessing pipelines for the human connectome project. Neuroimage 80:105–124 Glasser MF, Sotiropoulos SN, Wilson JA, Coalson TS, Fischl B, Andersson JL, Xu J, Jbabdi S, Webster M, Polimeni JR, Van Essen DC, Jenkinson M (2013) The minimal preprocessing pipelines for the human connectome project. Neuroimage 80:105–124
4.
go back to reference Griswold MA, Jakob PM, Heidemann RM, Nittka M, Jellus V, Wang J, Kiefer B, Haase A (2002) Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn Reson Med 47:1202–1210PubMedCrossRef Griswold MA, Jakob PM, Heidemann RM, Nittka M, Jellus V, Wang J, Kiefer B, Haase A (2002) Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn Reson Med 47:1202–1210PubMedCrossRef
5.
go back to reference Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P (1999) SENSE: sensitivity encoding for fast MRI. Magn Reson Med 42:952–962PubMedCrossRef Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P (1999) SENSE: sensitivity encoding for fast MRI. Magn Reson Med 42:952–962PubMedCrossRef
6.
go back to reference Breuer FA, Kannengiesser SAR, Blaimer M, Seiberlich N, Jakob PM, Griswold MA (2009) General formulation for quantitative G-factor calculation in GRAPPA reconstructions. Magn Reson Med 62:739–746PubMedCrossRef Breuer FA, Kannengiesser SAR, Blaimer M, Seiberlich N, Jakob PM, Griswold MA (2009) General formulation for quantitative G-factor calculation in GRAPPA reconstructions. Magn Reson Med 62:739–746PubMedCrossRef
7.
go back to reference Weiger M, Pruessmann KP, Boesiger P (2002) 2D SENSE for faster 3D MRI. Magn Reson Mater Phy 14:10–19CrossRef Weiger M, Pruessmann KP, Boesiger P (2002) 2D SENSE for faster 3D MRI. Magn Reson Mater Phy 14:10–19CrossRef
8.
go back to reference Wiggins GC, Triantafyllou C, Potthast A, Reykowski A, Nittka M, Wald LL (2006) 32-channel 3 Tesla receive-only phased-array head coil with soccer-ball element geometry. Magn Reson Med 56:216–223PubMedCrossRef Wiggins GC, Triantafyllou C, Potthast A, Reykowski A, Nittka M, Wald LL (2006) 32-channel 3 Tesla receive-only phased-array head coil with soccer-ball element geometry. Magn Reson Med 56:216–223PubMedCrossRef
9.
go back to reference Breuer FA, Blaimer M, Mueller MF, Seiberlich N, Heidemann RM, Griswold MA, Jakob PM (2006) Controlled aliasing in volumetric parallel imaging (2D CAIPIRINHA). Magn Reson Med 55:549–556PubMedCrossRef Breuer FA, Blaimer M, Mueller MF, Seiberlich N, Heidemann RM, Griswold MA, Jakob PM (2006) Controlled aliasing in volumetric parallel imaging (2D CAIPIRINHA). Magn Reson Med 55:549–556PubMedCrossRef
10.
go back to reference Riffel P, Attenberger UI, Kannengiesser S, Nickel MD, Arndt C, Meyer M, Schoenberg SO, Michaely HJ (2013) Highly accelerated t1-weighted abdominal imaging using 2-dimensional controlled aliasing in parallel imaging results in higher acceleration: a comparison with generalized autocalibrating partially parallel acquisitions parallel imaging. Invest Radiol 48:554–561PubMedCrossRef Riffel P, Attenberger UI, Kannengiesser S, Nickel MD, Arndt C, Meyer M, Schoenberg SO, Michaely HJ (2013) Highly accelerated t1-weighted abdominal imaging using 2-dimensional controlled aliasing in parallel imaging results in higher acceleration: a comparison with generalized autocalibrating partially parallel acquisitions parallel imaging. Invest Radiol 48:554–561PubMedCrossRef
11.
go back to reference Bernstein MA, Fain SB, Riederer SJ (2001) Effect of windowing and zero-filled reconstruction of MRI data on spatial resolution and acquisition strategy. J Magn Reson Imaging 14:270–280PubMedCrossRef Bernstein MA, Fain SB, Riederer SJ (2001) Effect of windowing and zero-filled reconstruction of MRI data on spatial resolution and acquisition strategy. J Magn Reson Imaging 14:270–280PubMedCrossRef
12.
go back to reference Silver MS, Joseph RI, Hoult DI (1985) Selective spin inversion in nuclear magnetic resonance and coherent optics through an exact solution of the Bloch–Riccati equation. Phys Rev A 31:2753–2755PubMedCrossRef Silver MS, Joseph RI, Hoult DI (1985) Selective spin inversion in nuclear magnetic resonance and coherent optics through an exact solution of the Bloch–Riccati equation. Phys Rev A 31:2753–2755PubMedCrossRef
13.
go back to reference Zur Y, Wood ML, Neuringer LJ (1991) Spoiling of transverse magnetization in steady-state sequences. Magn Reson Med 21:251–263PubMedCrossRef Zur Y, Wood ML, Neuringer LJ (1991) Spoiling of transverse magnetization in steady-state sequences. Magn Reson Med 21:251–263PubMedCrossRef
14.
go back to reference Roemer PB, Edelstein WA, Hayes CE, Souza SP, Mueller OM (1990) The NMR phased array. Magn Reson Med 16:192–225PubMedCrossRef Roemer PB, Edelstein WA, Hayes CE, Souza SP, Mueller OM (1990) The NMR phased array. Magn Reson Med 16:192–225PubMedCrossRef
15.
go back to reference Busse RF, Brau ACS, Vu A, Michelich CR, Bayram E, Kijowski R, Reeder SB, Rowley HA (2008) Effects of refocusing flip angle modulation and view ordering in 3D fast spin echo. Magn Reson Med 60:640–649PubMedCrossRefPubMedCentral Busse RF, Brau ACS, Vu A, Michelich CR, Bayram E, Kijowski R, Reeder SB, Rowley HA (2008) Effects of refocusing flip angle modulation and view ordering in 3D fast spin echo. Magn Reson Med 60:640–649PubMedCrossRefPubMedCentral
16.
go back to reference Dietrich O, Raya JG, Reeder SB, Reiser MF, Schoenberg SO (2007) Measurement of signal-to-noise ratios in MR images: influence of multichannel coils, parallel imaging, and reconstruction filters. J Magn Reson Imaging 26:375–385PubMedCrossRef Dietrich O, Raya JG, Reeder SB, Reiser MF, Schoenberg SO (2007) Measurement of signal-to-noise ratios in MR images: influence of multichannel coils, parallel imaging, and reconstruction filters. J Magn Reson Imaging 26:375–385PubMedCrossRef
17.
18.
go back to reference Krueger G, Granziera C, Jack CR, Gunter JL, Littmann A, Mortamet B, Kannengiesser S, Sorensen AG, Ward CP, Reyes DA, Britson PJ, Fischer H, Bernstein MA (2012) Effects of MRI scan acceleration on brain volume measurement consistency. J Magn Reson Imaging 36:1234–1240PubMedCrossRefPubMedCentral Krueger G, Granziera C, Jack CR, Gunter JL, Littmann A, Mortamet B, Kannengiesser S, Sorensen AG, Ward CP, Reyes DA, Britson PJ, Fischer H, Bernstein MA (2012) Effects of MRI scan acceleration on brain volume measurement consistency. J Magn Reson Imaging 36:1234–1240PubMedCrossRefPubMedCentral
19.
go back to reference Lin C, Bernstein MA (2008) 3D magnetization prepared elliptical centric fast gradient echo imaging. Magn Reson Med 59:434–439PubMedCrossRef Lin C, Bernstein MA (2008) 3D magnetization prepared elliptical centric fast gradient echo imaging. Magn Reson Med 59:434–439PubMedCrossRef
20.
go back to reference Deichmann R, Good CD, Josephs O, Ashburner J, Turner R (2000) Optimization of 3-D MP-RAGE sequences for structural brain imaging. Neuroimage 12:112–127PubMedCrossRef Deichmann R, Good CD, Josephs O, Ashburner J, Turner R (2000) Optimization of 3-D MP-RAGE sequences for structural brain imaging. Neuroimage 12:112–127PubMedCrossRef
21.
go back to reference Feiweier T (2006) US Patent US 7,728,588, B2 Feiweier T (2006) US Patent US 7,728,588, B2
22.
go back to reference Mugler JP, Epstein FH, Brookeman JR (1992) Shaping the signal response during the approach to steady state in three-dimensional magnetization-prepared rapid gradient-echo imaging using variable flip angles. Magn Reson Med 28:165–185PubMedCrossRef Mugler JP, Epstein FH, Brookeman JR (1992) Shaping the signal response during the approach to steady state in three-dimensional magnetization-prepared rapid gradient-echo imaging using variable flip angles. Magn Reson Med 28:165–185PubMedCrossRef
23.
go back to reference Stoecker T, Shah NJ (2006) MP-SAGE: a new MP-RAGE sequence with enhanced SNR and CNR for brain imaging utilizing square-spiral phase encoding and variable flip angles. Magn Reson Med 56:824–834CrossRef Stoecker T, Shah NJ (2006) MP-SAGE: a new MP-RAGE sequence with enhanced SNR and CNR for brain imaging utilizing square-spiral phase encoding and variable flip angles. Magn Reson Med 56:824–834CrossRef
24.
go back to reference Marques JP, Kober T, Krueger G, van der Zwaag W, Van de Moortele P-F, Gruetter R (2010) MP2RAGE, a self bias-field corrected sequence for improved segmentation and T1-mapping at high field. Neuroimage 49:1271–1281PubMedCrossRef Marques JP, Kober T, Krueger G, van der Zwaag W, Van de Moortele P-F, Gruetter R (2010) MP2RAGE, a self bias-field corrected sequence for improved segmentation and T1-mapping at high field. Neuroimage 49:1271–1281PubMedCrossRef
25.
go back to reference Tanner M, Gambarota G, Kober T, Krueger G, Erritzoe D, Marques JP, Newbould R (2012) Fluid and white matter suppression with the MP2RAGE sequence. J Magn Reson Imaging 35:1063–1070PubMedCrossRef Tanner M, Gambarota G, Kober T, Krueger G, Erritzoe D, Marques JP, Newbould R (2012) Fluid and white matter suppression with the MP2RAGE sequence. J Magn Reson Imaging 35:1063–1070PubMedCrossRef
27.
go back to reference Kwon KT, Wu HH, Shin T, Cukur T, Lustig M, Nishimura DG (2013) Three-dimensional magnetization-prepared imaging using a concentric cylinders trajectory. Magn Reson Med. doi:10.1002/mrm.24823 Kwon KT, Wu HH, Shin T, Cukur T, Lustig M, Nishimura DG (2013) Three-dimensional magnetization-prepared imaging using a concentric cylinders trajectory. Magn Reson Med. doi:10.​1002/​mrm.​24823
Metadata
Title
Two-dimensional accelerated MP-RAGE imaging with flexible linear reordering
Authors
Daniel Brenner
Rüdiger Stirnberg
Eberhard D. Pracht
Tony Stöcker
Publication date
01-10-2014
Publisher
Springer Berlin Heidelberg
Published in
Magnetic Resonance Materials in Physics, Biology and Medicine / Issue 5/2014
Print ISSN: 0968-5243
Electronic ISSN: 1352-8661
DOI
https://doi.org/10.1007/s10334-014-0430-y

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