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Published in: Insights into Imaging 1/2021

01-12-2021 | Original Article

T-staging pulmonary oncology from radiological reports using natural language processing: translating into a multi-language setting

Authors: J. Martijn Nobel, Sander Puts, Jakob Weiss, Hugo J. W. L. Aerts, Raymond H. Mak, Simon G. F. Robben, André L. A. J. Dekker

Published in: Insights into Imaging | Issue 1/2021

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Abstract

Background

In the era of datafication, it is important that medical data are accurate and structured for multiple applications. Especially data for oncological staging need to be accurate to stage and treat a patient, as well as population-level surveillance and outcome assessment. To support data extraction from free-text radiological reports, Dutch natural language processing (NLP) algorithm was built to quantify T-stage of pulmonary tumors according to the tumor node metastasis (TNM) classification. This structuring tool was translated and validated on English radiological free-text reports. A rule-based algorithm to classify T-stage was trained and validated on, respectively, 200 and 225 English free-text radiological reports from diagnostic computed tomography (CT) obtained for staging of patients with lung cancer. The automated T-stage extracted by the algorithm from the report was compared to manual staging. A graphical user interface was built for training purposes to visualize the results of the algorithm by highlighting the extracted concepts and its modifying context.

Results

Accuracy of the T-stage classifier was 0.89 in the validation set, 0.84 when considering the T-substages, and 0.76 when only considering tumor size. Results were comparable with the Dutch results (respectively, 0.88, 0.89 and 0.79). Most errors were made due to ambiguity issues that could not be solved by the rule-based nature of the algorithm.

Conclusions

NLP can be successfully applied for staging lung cancer from free-text radiological reports in different languages. Focused introduction of machine learning should be introduced in a hybrid approach to improve performance.
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Literature
1.
go back to reference Pinto dos Santos D (2019) The value of structured reporting for AI. In: Ranschaert ER, Morozov S, Algra PR (eds) Artifical intelligence in medical imaging: opportunities, applications and risks. Springer Nature, Cham Pinto dos Santos D (2019) The value of structured reporting for AI. In: Ranschaert ER, Morozov S, Algra PR (eds) Artifical intelligence in medical imaging: opportunities, applications and risks. Springer Nature, Cham
5.
go back to reference Jain NL, Friedman C (1997) Identification of findings suspicious for breast cancer based on natural language processing of mammogram reports. In: Proc AMIA Annu Fall Symp, pp 829–833 Jain NL, Friedman C (1997) Identification of findings suspicious for breast cancer based on natural language processing of mammogram reports. In: Proc AMIA Annu Fall Symp, pp 829–833
6.
go back to reference Mamlin BW, Heinze DT, McDonald CJ (2003) Automated extraction and normalization of findings from cancer related free-text radiology reports. In: AMIA Annu Symp Proc, pp 420–424 Mamlin BW, Heinze DT, McDonald CJ (2003) Automated extraction and normalization of findings from cancer related free-text radiology reports. In: AMIA Annu Symp Proc, pp 420–424
7.
go back to reference Brierley J, Gospodarowicz MK, Wittekind C (eds) (2017) TNM classification of malignant tumours, 8th edn. Wiley, Chichester Brierley J, Gospodarowicz MK, Wittekind C (eds) (2017) TNM classification of malignant tumours, 8th edn. Wiley, Chichester
20.
go back to reference Honnibal M, Montani I (2017) An improved non-monotonic transition system for dependency parsing. In: Proceedings of the 2015 conference on empirical methods in natural language processing, pp 1373–1378 Honnibal M, Montani I (2017) An improved non-monotonic transition system for dependency parsing. In: Proceedings of the 2015 conference on empirical methods in natural language processing, pp 1373–1378
Metadata
Title
T-staging pulmonary oncology from radiological reports using natural language processing: translating into a multi-language setting
Authors
J. Martijn Nobel
Sander Puts
Jakob Weiss
Hugo J. W. L. Aerts
Raymond H. Mak
Simon G. F. Robben
André L. A. J. Dekker
Publication date
01-12-2021
Publisher
Springer International Publishing
Published in
Insights into Imaging / Issue 1/2021
Electronic ISSN: 1869-4101
DOI
https://doi.org/10.1186/s13244-021-01018-1

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