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Published in: BMC Cancer 1/2006

Open Access 01-12-2006 | Research article

Selection, affinity maturation, and characterization of a human scFv antibody against CEA protein

Authors: Emiliano Pavoni, Michela Flego, Maria Luisa Dupuis, Stefano Barca, Fiorella Petronzelli, Anna Maria Anastasi, Valeria D'Alessio, Angela Pelliccia, Paola Vaccaro, Giorgia Monteriù, Alessandro Ascione, Rita De Santis, Franco Felici, Maurizio Cianfriglia, Olga Minenkova

Published in: BMC Cancer | Issue 1/2006

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Abstract

Background

CEA is a tumor-associated antigen abundantly expressed on several cancer types, including those naturally refractory to chemotherapy. The selection and characterization of human anti-CEA single-chain antibody fragments (scFv) is a first step toward the construction of new anticancer monoclonal antibodies designed for optimal blood clearance and tumor penetration.

Methods

The human MA39 scFv, selected for its ability to recognize a CEA epitope expressed on human colon carcinomas, was first isolated from a large semi-synthetic ETH-2 antibody phage library, panned on human purified CEA protein. Subsequently, by in vitro mutagenesis of a gene encoding for the scFv MA39, a new library was established, and new scFv antibodies with improved affinity towards the CEA cognate epitope were selected and characterized.

Results

The scFv MA39 antibody was affinity-maturated by in vitro mutagenesis and the new scFv clone, E8, was isolated, typed for CEA family member recognition and its CEACAM1, 3 and 5 shared epitope characterized for expression in a large panel of human normal and tumor tissues and cells.

Conclusion

The binding affinity of the scFv E8 is in a range for efficient, in vivo, antigen capture in tumor cells expressing a shared epitope of the CEACAM1, 3 and 5 proteins. This new immunoreagent meets all criteria for a potential anticancer compound: it is human, hence poorly or not at all immunogenic, and it binds selectively and with good affinity to the CEA epitope expressed by metastatic melanoma and colon and lung carcinomas. Furthermore, its small molecular size should provide for efficient tissue penetration, yet give rapid plasma clearance.
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Literature
1.
go back to reference Coligan JE, Lautenschleger JT, Egan ML, Todd CW: Isolation and characterization of carcinoembryonic antigen. Immunochemistry. 1972, 9 (4): 377-386. 10.1016/0019-2791(72)90308-4.CrossRefPubMed Coligan JE, Lautenschleger JT, Egan ML, Todd CW: Isolation and characterization of carcinoembryonic antigen. Immunochemistry. 1972, 9 (4): 377-386. 10.1016/0019-2791(72)90308-4.CrossRefPubMed
2.
3.
go back to reference Thompson JA, Grunert F, Zimmermann W: Carcinoembryonic antigen gene family: molecular biology and clinical perspectives. J Clin Lab Anal. 1991, 5: 344-366.CrossRefPubMed Thompson JA, Grunert F, Zimmermann W: Carcinoembryonic antigen gene family: molecular biology and clinical perspectives. J Clin Lab Anal. 1991, 5: 344-366.CrossRefPubMed
4.
go back to reference Hammarstrom S: The carcinoembryonic antigen (CEA) family: structures, suggested functions and expression in normal and malignant tissues. Semin Cancer Biol. 1999, 9: 67-81. 10.1006/scbi.1998.0119.CrossRefPubMed Hammarstrom S: The carcinoembryonic antigen (CEA) family: structures, suggested functions and expression in normal and malignant tissues. Semin Cancer Biol. 1999, 9: 67-81. 10.1006/scbi.1998.0119.CrossRefPubMed
5.
go back to reference Graham RA, Wang S, Catalano PJ, Haller DG: Postsurgical surveillance of colon cancer: preliminary cost analysis of physician examination, carcinoembryonic antigen testing, chest x-ray, and colonoscopy. Ann Surg. 1998, 228 (1): 59-63. 10.1097/00000658-199807000-00009.CrossRefPubMedPubMedCentral Graham RA, Wang S, Catalano PJ, Haller DG: Postsurgical surveillance of colon cancer: preliminary cost analysis of physician examination, carcinoembryonic antigen testing, chest x-ray, and colonoscopy. Ann Surg. 1998, 228 (1): 59-63. 10.1097/00000658-199807000-00009.CrossRefPubMedPubMedCentral
6.
go back to reference Goldenberg DM, DeLand F, Kim E, Bennett S, Primus FJ, van Nagell JR, Estes N, DeSimone P, Rayburn P: Use of radiolabeled antibodies to carcinoembryonic antigen for the detection and localization of diverse cancers by external photoscanning. N Engl J Med. 1978, 298 (25): 1384-1386.CrossRefPubMed Goldenberg DM, DeLand F, Kim E, Bennett S, Primus FJ, van Nagell JR, Estes N, DeSimone P, Rayburn P: Use of radiolabeled antibodies to carcinoembryonic antigen for the detection and localization of diverse cancers by external photoscanning. N Engl J Med. 1978, 298 (25): 1384-1386.CrossRefPubMed
7.
go back to reference Kim JC, Kim WS, Ryu JS, Oh SJ, Lee DH, Koo KH, Roh SA, Kim HC, Yu CS, Kang GH, Bodmer WF: Applicability of carcinoembryonic antigen-specific monoclonal antibodies to radioimmunoguided surgery for human colorectal carcinoma. Cancer Res. 2000, 60 (17): 4825-4829.PubMed Kim JC, Kim WS, Ryu JS, Oh SJ, Lee DH, Koo KH, Roh SA, Kim HC, Yu CS, Kang GH, Bodmer WF: Applicability of carcinoembryonic antigen-specific monoclonal antibodies to radioimmunoguided surgery for human colorectal carcinoma. Cancer Res. 2000, 60 (17): 4825-4829.PubMed
8.
go back to reference Fuster D, Maurel J, Muxi A, Setoain X, Ayuso C, Martin F, Ortega ML, Fuertes S, Pons F: Is there a role for (99 m)Tc-anti-CEA monoclonal antibody imaging in the diagnosis of recurrent colorectal carcinoma?. Q J Nucl Med. 2003, 47 (2): 109-115.PubMed Fuster D, Maurel J, Muxi A, Setoain X, Ayuso C, Martin F, Ortega ML, Fuertes S, Pons F: Is there a role for (99 m)Tc-anti-CEA monoclonal antibody imaging in the diagnosis of recurrent colorectal carcinoma?. Q J Nucl Med. 2003, 47 (2): 109-115.PubMed
9.
go back to reference Mayer A, Tsiompanou E, O'Malley D, Boxer GM, Bhatia J, Flynn AA, Chester KA, Davidson BR, Lewis AA, Winslet MC, Dhillon AP, Hilson AJ, Begent RH: Radioimmunoguided surgery in colorectal cancer using a genetically engineered anti-CEA single-chain Fv antibody. Clin Cancer Res. 2000, 6 (5): 1711-1719.PubMed Mayer A, Tsiompanou E, O'Malley D, Boxer GM, Bhatia J, Flynn AA, Chester KA, Davidson BR, Lewis AA, Winslet MC, Dhillon AP, Hilson AJ, Begent RH: Radioimmunoguided surgery in colorectal cancer using a genetically engineered anti-CEA single-chain Fv antibody. Clin Cancer Res. 2000, 6 (5): 1711-1719.PubMed
10.
go back to reference Viti F, Nilsson F, Demartis S, Huber A, Neri D: Design and use of phage display libraries for the selection of antibodies and enzymes. Methods Enzymol. 2000, 326: 480-505.CrossRefPubMed Viti F, Nilsson F, Demartis S, Huber A, Neri D: Design and use of phage display libraries for the selection of antibodies and enzymes. Methods Enzymol. 2000, 326: 480-505.CrossRefPubMed
11.
go back to reference Pini A, Viti F, Santucci A, Carnemolla B, Zardi L, Neri P, Neri D: Design and use of a phage display library. Human antibodies with subnanomolar affinity against a marker of angiogenesis eluted from a two-dimensional gel. J Biol Chem. 1998, 273 (34): 21769-21776. 10.1074/jbc.273.34.21769.CrossRefPubMed Pini A, Viti F, Santucci A, Carnemolla B, Zardi L, Neri P, Neri D: Design and use of a phage display library. Human antibodies with subnanomolar affinity against a marker of angiogenesis eluted from a two-dimensional gel. J Biol Chem. 1998, 273 (34): 21769-21776. 10.1074/jbc.273.34.21769.CrossRefPubMed
12.
go back to reference Sambrook J, Fritsch EF, Maniatis T: Molecular cloning: A laboratory manual. Cold Spring Harbor. 1989, Cold Spring Harbor Laboratory Press Sambrook J, Fritsch EF, Maniatis T: Molecular cloning: A laboratory manual. Cold Spring Harbor. 1989, Cold Spring Harbor Laboratory Press
13.
go back to reference Ascione A, Flego M, Zamboni S, De Cinti E, Dupuis ML, Cianfriglia M: Isolation and characterization of the human monoclonal antibodies C10 in single-chain fragment variable (scFv) format to glucose oxidase from Aspergillus niger. Hybrid Hybridomics. 2004, 23 (6): 380-384.CrossRefPubMed Ascione A, Flego M, Zamboni S, De Cinti E, Dupuis ML, Cianfriglia M: Isolation and characterization of the human monoclonal antibodies C10 in single-chain fragment variable (scFv) format to glucose oxidase from Aspergillus niger. Hybrid Hybridomics. 2004, 23 (6): 380-384.CrossRefPubMed
14.
go back to reference Cadwell RC, Joyce GF: Randomization of genes by PCR mutagenesis. PCR Methods Appl. 1992, 2 (1): 28-33.CrossRefPubMed Cadwell RC, Joyce GF: Randomization of genes by PCR mutagenesis. PCR Methods Appl. 1992, 2 (1): 28-33.CrossRefPubMed
15.
go back to reference Gram H, Marconi LA, Barbas CF, Collet TA, Lerner RA, Kang AS: In vitro selection and affinity maturation of antibodies from a naïve combinatorial immunoglobulin library. Proc Natl Acad Sci USA. 1992, 89 (8): 3576-3580.CrossRefPubMedPubMedCentral Gram H, Marconi LA, Barbas CF, Collet TA, Lerner RA, Kang AS: In vitro selection and affinity maturation of antibodies from a naïve combinatorial immunoglobulin library. Proc Natl Acad Sci USA. 1992, 89 (8): 3576-3580.CrossRefPubMedPubMedCentral
16.
go back to reference Knappik A, Pluckthun A: Engineered turns of a recombinant antibody improve its in vivo folding. Protein Eng. 1995, 8 (1): 81-89.CrossRefPubMed Knappik A, Pluckthun A: Engineered turns of a recombinant antibody improve its in vivo folding. Protein Eng. 1995, 8 (1): 81-89.CrossRefPubMed
18.
go back to reference Eggertsson G, Soll D: Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli. Microbiol Rev. 1988, 52 (3): 354-374.PubMedPubMedCentral Eggertsson G, Soll D: Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli. Microbiol Rev. 1988, 52 (3): 354-374.PubMedPubMedCentral
19.
go back to reference Kopelowitz J, Hampe C, Goldman R, Reches M, Engelberg-Kulka H: Influence of codon context on UGA suppression and readthrough. J Mol Biol. 1992, 225 (2): 261-269. 10.1016/0022-2836(92)90920-F.CrossRefPubMed Kopelowitz J, Hampe C, Goldman R, Reches M, Engelberg-Kulka H: Influence of codon context on UGA suppression and readthrough. J Mol Biol. 1992, 225 (2): 261-269. 10.1016/0022-2836(92)90920-F.CrossRefPubMed
20.
go back to reference Tate WP, Mannering SA: Three, four or more: the translational stop signal at length. Mol Microbiol. 1996, 21 (2): 213-219. 10.1046/j.1365-2958.1996.6391352.x.CrossRefPubMed Tate WP, Mannering SA: Three, four or more: the translational stop signal at length. Mol Microbiol. 1996, 21 (2): 213-219. 10.1046/j.1365-2958.1996.6391352.x.CrossRefPubMed
21.
go back to reference Lovett PS, Ambulos NP, Mulbry W, Noguchi N, Rogers EJ: UGA can be decoded as tryptophan at low efficiency in Bacillus subtilis. J Bacteriol. 1991, 173 (5): 1810-1812.PubMedPubMedCentral Lovett PS, Ambulos NP, Mulbry W, Noguchi N, Rogers EJ: UGA can be decoded as tryptophan at low efficiency in Bacillus subtilis. J Bacteriol. 1991, 173 (5): 1810-1812.PubMedPubMedCentral
22.
go back to reference Khazaie K, Buchanan JH, Rosenberger RF: The accuracy of Q beta RNA translation. 1. Errors during the synthesis of Q beta proteins by intact Escherichia coli cells. Eur J Biochem. 1984, 144 (3): 485-489. 10.1111/j.1432-1033.1984.tb08491.x.CrossRefPubMed Khazaie K, Buchanan JH, Rosenberger RF: The accuracy of Q beta RNA translation. 1. Errors during the synthesis of Q beta proteins by intact Escherichia coli cells. Eur J Biochem. 1984, 144 (3): 485-489. 10.1111/j.1432-1033.1984.tb08491.x.CrossRefPubMed
23.
24.
go back to reference Beauchemin N, Draber P, Dveksler G, Gold P, Gray-Owen S, Grunert F, Hammarstrom S, Holmes KV, Karlsson A, Kuroki M, Lin SH, Lucka L, Najjar SM, Neumaier M, Obrink B, Shively JE, Skubitz KM, Stanners CP, Thomas P, Thompson JA, Virji M, von Kleist S, Wagener C, Watt S, Zimmermann W: Redefined nomenclature for members of the carcinoembryonic antigen family. Exp Cell Res. 1999, 252 (2): 243-249. 10.1006/excr.1999.4610.CrossRefPubMed Beauchemin N, Draber P, Dveksler G, Gold P, Gray-Owen S, Grunert F, Hammarstrom S, Holmes KV, Karlsson A, Kuroki M, Lin SH, Lucka L, Najjar SM, Neumaier M, Obrink B, Shively JE, Skubitz KM, Stanners CP, Thomas P, Thompson JA, Virji M, von Kleist S, Wagener C, Watt S, Zimmermann W: Redefined nomenclature for members of the carcinoembryonic antigen family. Exp Cell Res. 1999, 252 (2): 243-249. 10.1006/excr.1999.4610.CrossRefPubMed
25.
go back to reference Stoffel A, Neumaier M, Gaida FJ, Fenger U, Drzeniek Z, Haubeck HD, Wagener C: Monoclonal, anti-domain and anti-peptide antibodies assign the molecular weight 160,000 granulocyte membrane antigen of the CD66 cluster to a mRNA species encoded by the biliary glycoprotein gene, a member of the carcinoembryonic antigen gene family. J Immunol. 1993, 150 (11): 4978-4984.PubMed Stoffel A, Neumaier M, Gaida FJ, Fenger U, Drzeniek Z, Haubeck HD, Wagener C: Monoclonal, anti-domain and anti-peptide antibodies assign the molecular weight 160,000 granulocyte membrane antigen of the CD66 cluster to a mRNA species encoded by the biliary glycoprotein gene, a member of the carcinoembryonic antigen gene family. J Immunol. 1993, 150 (11): 4978-4984.PubMed
26.
go back to reference Watt SM, Sala-Newby G, Hoang T, Gilmore DJ, Grunert F, Nagel G, Murdoch SJ, Tchilian E, Lennox ES, Waldmann H: CD66 identifies a neutrophil-specific epitope within the hematopoietic system that is expressed by members of the carcinoembryonic antigen family of adhesion molecules. Blood. 1991, 78 (1): 63-74.PubMed Watt SM, Sala-Newby G, Hoang T, Gilmore DJ, Grunert F, Nagel G, Murdoch SJ, Tchilian E, Lennox ES, Waldmann H: CD66 identifies a neutrophil-specific epitope within the hematopoietic system that is expressed by members of the carcinoembryonic antigen family of adhesion molecules. Blood. 1991, 78 (1): 63-74.PubMed
27.
go back to reference Brummer J, Neumaier M, Gopfert C, Wagener C: Association of pp60c-src with biliary glycoprotein (CD66a), an adhesion molecule of the carcinoembryonic antigen family downregulated in colorectal carcinomas. Oncogene. 1995, 11 (8): 1649-1655.PubMed Brummer J, Neumaier M, Gopfert C, Wagener C: Association of pp60c-src with biliary glycoprotein (CD66a), an adhesion molecule of the carcinoembryonic antigen family downregulated in colorectal carcinomas. Oncogene. 1995, 11 (8): 1649-1655.PubMed
28.
go back to reference Busch C, Hanssen TA, Wagener C, OBrink B: Down-regulation of CEACAM1 in human prostate cancer: correlation with loss of cell polarity, increased proliferation rate, and Gleason grade 3 to 4 transition. Hum Pathol. 2002, 33 (3): 290-298. 10.1053/hupa.2002.32218.CrossRefPubMed Busch C, Hanssen TA, Wagener C, OBrink B: Down-regulation of CEACAM1 in human prostate cancer: correlation with loss of cell polarity, increased proliferation rate, and Gleason grade 3 to 4 transition. Hum Pathol. 2002, 33 (3): 290-298. 10.1053/hupa.2002.32218.CrossRefPubMed
29.
go back to reference Volpert O, Luo W, Liu TJ, Estrera VT, Logothetis C, Lin SH: Inhibition of prostate tumor angiogenesis by the tumor suppressor CEACAM1. J Biol Chem. 2002, 277 (38): 35696-35702. 10.1074/jbc.M205319200.CrossRefPubMed Volpert O, Luo W, Liu TJ, Estrera VT, Logothetis C, Lin SH: Inhibition of prostate tumor angiogenesis by the tumor suppressor CEACAM1. J Biol Chem. 2002, 277 (38): 35696-35702. 10.1074/jbc.M205319200.CrossRefPubMed
30.
go back to reference Ebrahimnejad A, Streichert T, Nollau P, Horst AK, Wagener C, Bamberger AM, Brummer J: CEACAM1 enhances invasion and migration of melanocytic and melanoma cells. Am J Pathol. 2004, 165 (5): 1781-1787.CrossRefPubMedPubMedCentral Ebrahimnejad A, Streichert T, Nollau P, Horst AK, Wagener C, Bamberger AM, Brummer J: CEACAM1 enhances invasion and migration of melanocytic and melanoma cells. Am J Pathol. 2004, 165 (5): 1781-1787.CrossRefPubMedPubMedCentral
31.
go back to reference Thies A, Moll I, Berger J, Wagener C, Brummer J, Schulze HJ, Brunner G, Schumacher U: CEACAM1 expression in cutaneous malignant melanoma predicts the development of metastatic disease. J Clin Oncol. 2002, 20 (10): 2530-2536. 10.1200/JCO.2002.05.033.CrossRefPubMed Thies A, Moll I, Berger J, Wagener C, Brummer J, Schulze HJ, Brunner G, Schumacher U: CEACAM1 expression in cutaneous malignant melanoma predicts the development of metastatic disease. J Clin Oncol. 2002, 20 (10): 2530-2536. 10.1200/JCO.2002.05.033.CrossRefPubMed
32.
go back to reference Oliveira-Ferrer L, Tilki D, Ziegeler G, Hauschild J, Loges S, Irmak S, Kilic E, Huland H, Friedrich M, Ergun S: Dual role of carcinoembryonic antigen-related cell adhesion molecule 1 in angiogenesis and invasion of human urinary bladder cancer. Cancer Res. 2004, 64 (24): 8932-8938. 10.1158/0008-5472.CAN-04-0505.CrossRefPubMed Oliveira-Ferrer L, Tilki D, Ziegeler G, Hauschild J, Loges S, Irmak S, Kilic E, Huland H, Friedrich M, Ergun S: Dual role of carcinoembryonic antigen-related cell adhesion molecule 1 in angiogenesis and invasion of human urinary bladder cancer. Cancer Res. 2004, 64 (24): 8932-8938. 10.1158/0008-5472.CAN-04-0505.CrossRefPubMed
33.
go back to reference Laack E, Nikbakht H, Peters A, Kugler C, Jasiewicz Y, Edler L, Brummer J, Schumacher U, Hossfeld DK: Expression of CEACAM1 in adenocarcinoma of the lung: a factor of independent prognostic significance. J Clin Oncol. 2002, 20 (21): 4279-4284. 10.1200/JCO.2002.08.067.CrossRefPubMed Laack E, Nikbakht H, Peters A, Kugler C, Jasiewicz Y, Edler L, Brummer J, Schumacher U, Hossfeld DK: Expression of CEACAM1 in adenocarcinoma of the lung: a factor of independent prognostic significance. J Clin Oncol. 2002, 20 (21): 4279-4284. 10.1200/JCO.2002.08.067.CrossRefPubMed
Metadata
Title
Selection, affinity maturation, and characterization of a human scFv antibody against CEA protein
Authors
Emiliano Pavoni
Michela Flego
Maria Luisa Dupuis
Stefano Barca
Fiorella Petronzelli
Anna Maria Anastasi
Valeria D'Alessio
Angela Pelliccia
Paola Vaccaro
Giorgia Monteriù
Alessandro Ascione
Rita De Santis
Franco Felici
Maurizio Cianfriglia
Olga Minenkova
Publication date
01-12-2006
Publisher
BioMed Central
Published in
BMC Cancer / Issue 1/2006
Electronic ISSN: 1471-2407
DOI
https://doi.org/10.1186/1471-2407-6-41

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