Skip to main content
Top
Published in: Journal of Imaging Informatics in Medicine 2/2024

10-01-2024

SAA-SDM: Neural Networks Faster Learned to Segment Organ Images

Authors: Chao Gao, Yongtao Shi, Shuai Yang, Bangjun Lei

Published in: Journal of Imaging Informatics in Medicine | Issue 2/2024

Login to get access

Abstract

In the field of medicine, rapidly and accurately segmenting organs in medical images is a crucial application of computer technology. This paper introduces a feature map module, Strength Attention Area Signed Distance Map (SAA-SDM), based on the principal component analysis (PCA) principle. The module is designed to accelerate neural networks’ convergence speed in rapidly achieving high precision. SAA-SDM provides the neural network with confidence information regarding the target and background, similar to the signed distance map (SDM), thereby enhancing the network’s understanding of semantic information related to the target. Furthermore, this paper presents a training scheme tailored for the module, aiming to achieve finer segmentation and improved generalization performance. Validation of our approach is carried out using TRUS and chest X-ray datasets. Experimental results demonstrate that our method significantly enhances neural networks’ convergence speed and precision. For instance, the convergence speed of UNet and UNET +  + is improved by more than 30%. Moreover, Segformer achieves an increase of over 6% and 3% in mIoU (mean Intersection over Union) on two test datasets without requiring pre-trained parameters. Our approach reduces the time and resource costs associated with training neural networks for organ segmentation tasks while effectively guiding the network to achieve meaningful learning even without pre-trained parameters. 
Literature
1.
go back to reference Hao, S.; Zhou, Y.; Guo, Y. A Brief Survey on Semantic Segmentation with Deep Learning. Neurocomputing 2020, 406, 302–321.CrossRef Hao, S.; Zhou, Y.; Guo, Y. A Brief Survey on Semantic Segmentation with Deep Learning. Neurocomputing 2020, 406, 302–321.CrossRef
2.
go back to reference Asgari Taghanaki, S.; Abhishek, K.; Cohen, J.P.; Cohen-Adad, J.; Hamarneh, G. Deep Semantic Segmentation of Natural and Medical Images: A Review. Artificial Intelligence Review 2021, 54, 137–178.CrossRef Asgari Taghanaki, S.; Abhishek, K.; Cohen, J.P.; Cohen-Adad, J.; Hamarneh, G. Deep Semantic Segmentation of Natural and Medical Images: A Review. Artificial Intelligence Review 2021, 54, 137–178.CrossRef
4.
go back to reference Wang, X.-F.; Min, H.; Zou, L.; Zhang, Y.-G.; Tang, Y.-Y.; Chen, C.-L.P. An Efficient Level Set Method Based on Multi-Scale Image Segmentation and Hermite Differential Operator. Neurocomputing 2016, 188, 90–101.CrossRef Wang, X.-F.; Min, H.; Zou, L.; Zhang, Y.-G.; Tang, Y.-Y.; Chen, C.-L.P. An Efficient Level Set Method Based on Multi-Scale Image Segmentation and Hermite Differential Operator. Neurocomputing 2016, 188, 90–101.CrossRef
5.
go back to reference Li, Z.; Liu, F.; Yang, W.; Peng, S.; Zhou, J. A Survey of Convolutional Neural Networks: Analysis, Applications, and Prospects. IEEE transactions on neural networks and learning systems 2021. Li, Z.; Liu, F.; Yang, W.; Peng, S.; Zhou, J. A Survey of Convolutional Neural Networks: Analysis, Applications, and Prospects. IEEE transactions on neural networks and learning systems 2021.
6.
go back to reference Gunel, B. Leveraging Prior Knowledge and Structure for Data-Efficient Machine Learning; Stanford University, 2022; Gunel, B. Leveraging Prior Knowledge and Structure for Data-Efficient Machine Learning; Stanford University, 2022;
7.
go back to reference Li, J.; Nebelung, S.; Schock, J.; Rath, B.; Tingart, M.; Liu, Y.; Siroros, N.; Eschweiler, J. A Novel Combined Level Set Model for Carpus Segmentation from Magnetic Resonance Images with Prior Knowledge Aligned in Polar Coordinate System. Computer Methods and Programs in Biomedicine 2021, 208, 106245.CrossRefPubMed Li, J.; Nebelung, S.; Schock, J.; Rath, B.; Tingart, M.; Liu, Y.; Siroros, N.; Eschweiler, J. A Novel Combined Level Set Model for Carpus Segmentation from Magnetic Resonance Images with Prior Knowledge Aligned in Polar Coordinate System. Computer Methods and Programs in Biomedicine 2021, 208, 106245.CrossRefPubMed
8.
go back to reference Peng, T.; Wu, Y.; Qin, J.; Wu, Q.J.; Cai, J. H-ProSeg: Hybrid Ultrasound Prostate Segmentation Based on Explainability-Guided Mathematical Model. Computer Methods and Programs in Biomedicine 2022, 219, 106752.CrossRefPubMed Peng, T.; Wu, Y.; Qin, J.; Wu, Q.J.; Cai, J. H-ProSeg: Hybrid Ultrasound Prostate Segmentation Based on Explainability-Guided Mathematical Model. Computer Methods and Programs in Biomedicine 2022, 219, 106752.CrossRefPubMed
9.
go back to reference Zhang, Z.; Gao, S.; Huang, Z. An Automatic Glioma Segmentation System Using a Multilevel Attention Pyramid Scene Parsing Network. Current Medical Imaging 2021, 17, 751–761.CrossRefPubMed Zhang, Z.; Gao, S.; Huang, Z. An Automatic Glioma Segmentation System Using a Multilevel Attention Pyramid Scene Parsing Network. Current Medical Imaging 2021, 17, 751–761.CrossRefPubMed
10.
go back to reference Long, X.; Zhang, W.; Zhao, B. PSPNet-SLAM: A Semantic SLAM Detect Dynamic Object by Pyramid Scene Parsing Network. IEEE Access 2020, 8, 214685–214695.CrossRef Long, X.; Zhang, W.; Zhao, B. PSPNet-SLAM: A Semantic SLAM Detect Dynamic Object by Pyramid Scene Parsing Network. IEEE Access 2020, 8, 214685–214695.CrossRef
13.
go back to reference Islam*, M.A.; Jia*, S.; Bruce, N.D.B. How Much Position Information Do Convolutional Neural Networks Encode?; September 25 2019. Islam*, M.A.; Jia*, S.; Bruce, N.D.B. How Much Position Information Do Convolutional Neural Networks Encode?; September 25 2019.
14.
go back to reference Liu, R.; Lehman, J.; Molino, P.; Petroski Such, F.; Frank, E.; Sergeev, A.; Yosinski, J. An Intriguing Failing of Convolutional Neural Networks and the CoordConv Solution. Advances in Neural Information Processing Systems 2018, 31. Liu, R.; Lehman, J.; Molino, P.; Petroski Such, F.; Frank, E.; Sergeev, A.; Yosinski, J. An Intriguing Failing of Convolutional Neural Networks and the CoordConv Solution. Advances in Neural Information Processing Systems 2018, 31.
15.
go back to reference Li, S.; Zhang, C.; He, X. Shape-Aware Semi-Supervised 3D Semantic Segmentation for Medical Images. In Proceedings of the Medical Image Computing and Computer Assisted Intervention–MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part I 23; Springer, 2020; pp. 552–561. Li, S.; Zhang, C.; He, X. Shape-Aware Semi-Supervised 3D Semantic Segmentation for Medical Images. In Proceedings of the Medical Image Computing and Computer Assisted Intervention–MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part I 23; Springer, 2020; pp. 552–561.
16.
go back to reference Liu, S.; Li, Y.; Li, X.; Cao, G. Shape-Aware Multi-Task Learning for Semi-Supervised 3D Medical Image Segmentation. In Proceedings of the 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM); December 2021; pp. 1418–1423. Liu, S.; Li, Y.; Li, X.; Cao, G. Shape-Aware Multi-Task Learning for Semi-Supervised 3D Medical Image Segmentation. In Proceedings of the 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM); December 2021; pp. 1418–1423.
17.
go back to reference Grandvalet, Y.; Bengio, Y.; Chapelle, O.; Schölkopf, B.; Zien, A. Entropy Regularization. Springer 2006. Grandvalet, Y.; Bengio, Y.; Chapelle, O.; Schölkopf, B.; Zien, A. Entropy Regularization. Springer 2006.
18.
go back to reference Lee, D.-H. Pseudo-Label: The Simple and Efficient Semi-Supervised Learning Method for Deep Neural Networks. In Proceedings of the Workshop on challenges in representation learning, ICML; 2013; Vol. 3, p. 896. Lee, D.-H. Pseudo-Label: The Simple and Efficient Semi-Supervised Learning Method for Deep Neural Networks. In Proceedings of the Workshop on challenges in representation learning, ICML; 2013; Vol. 3, p. 896.
23.
go back to reference Ronneberger, O.; Fischer, P.; Brox, T. U-Net: Convolutional Networks for Biomedical Image Segmentation. In Proceedings of the Medical Image Computing and Computer-Assisted Intervention–MICCAI 2015: 18th International Conference, Munich, Germany, October 5–9, 2015, Proceedings, Part III 18; Springer, 2015; pp. 234–241. Ronneberger, O.; Fischer, P.; Brox, T. U-Net: Convolutional Networks for Biomedical Image Segmentation. In Proceedings of the Medical Image Computing and Computer-Assisted Intervention–MICCAI 2015: 18th International Conference, Munich, Germany, October 5–9, 2015, Proceedings, Part III 18; Springer, 2015; pp. 234–241.
30.
go back to reference Strudel, R.; Garcia, R.; Laptev, I.; Schmid, C. Segmenter: Transformer for Semantic Segmentation.; 2021; pp. 7262–7272. Strudel, R.; Garcia, R.; Laptev, I.; Schmid, C. Segmenter: Transformer for Semantic Segmentation.; 2021; pp. 7262–7272.
Metadata
Title
SAA-SDM: Neural Networks Faster Learned to Segment Organ Images
Authors
Chao Gao
Yongtao Shi
Shuai Yang
Bangjun Lei
Publication date
10-01-2024
Publisher
Springer International Publishing
Published in
Journal of Imaging Informatics in Medicine / Issue 2/2024
Print ISSN: 2948-2925
Electronic ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-023-00947-1

Other articles of this Issue 2/2024

Journal of Imaging Informatics in Medicine 2/2024 Go to the issue