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Published in: European Radiology 11/2009

01-11-2009 | Neuro

Pitfalls in fMRI

Authors: Sven Haller, Andreas J. Bartsch

Published in: European Radiology | Issue 11/2009

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Abstract

Several different techniques allow a functional assessment of neuronal activations by magnetic resonance imaging (fMRI). The by far most influential fMRI technique is based on a local T2*-sensitive hemodynamic response to neuronal activation, also known as the blood oxygenation level dependent or BOLD effect. Consequently, the term ‘fMRI’ is often used synonymously with BOLD imaging. Because interpretations of fMRI brain activation maps often appear intuitive and compelling, the reader might be tempted not to critically question the fundamental processes and assumptions. We review some essential processes and assumptions of BOLD fMRI and discuss related confounds and pitfalls in fMRI – from the underlying physiological effect, to data acquisition, data analysis and the interpretation of the results including clinical fMRI. A background framework is provided for the systematic and critical interpretation of fMRI results.
Literature
1.
go back to reference Villringer A, Dirnagl U (1995) Coupling of brain activity and cerebral blood flow: basis of functional neuroimaging. Cerebrovasc Brain Metab Rev 3:240–276 Villringer A, Dirnagl U (1995) Coupling of brain activity and cerebral blood flow: basis of functional neuroimaging. Cerebrovasc Brain Metab Rev 3:240–276
2.
go back to reference Ogawa S, Tank DW, Menon R et al (1992) Intrinsic signal changes accompanying sensory stimulation: functional brain mapping with magnetic resonance imaging. Proc Natl Acad Sci USA 13:5951–5955 Ogawa S, Tank DW, Menon R et al (1992) Intrinsic signal changes accompanying sensory stimulation: functional brain mapping with magnetic resonance imaging. Proc Natl Acad Sci USA 13:5951–5955
3.
go back to reference Kwong KK, Belliveau JW, Chesler DA et al (1992) Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation. Proc Natl Acad Sci USA 12:5675–5679 Kwong KK, Belliveau JW, Chesler DA et al (1992) Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation. Proc Natl Acad Sci USA 12:5675–5679
4.
go back to reference Moonen CTW, Bandettini PA, and Aguirre GK (2000) Functional MRI, Springer Verlag, Berlin, Heidelberg, New York Moonen CTW, Bandettini PA, and Aguirre GK (2000) Functional MRI, Springer Verlag, Berlin, Heidelberg, New York
5.
go back to reference Buxton RB (2002) Introduction to Functional Magnetic Resonance Imaging: Principles and Techniques, Cambridge University Press, Cambridge, UK Buxton RB (2002) Introduction to Functional Magnetic Resonance Imaging: Principles and Techniques, Cambridge University Press, Cambridge, UK
6.
go back to reference Walter H (2005) Funktionelle Bildgebung in Psychiatrie und Psychotherapie: Methodische Grundlagen und klinische Anwendungen, Schattauer Walter H (2005) Funktionelle Bildgebung in Psychiatrie und Psychotherapie: Methodische Grundlagen und klinische Anwendungen, Schattauer
7.
go back to reference Leon Partain C (2006) JMRI special issue: clinical potential of brain mapping using MRI. J Magn Reson Imaging 6:785–786 Leon Partain C (2006) JMRI special issue: clinical potential of brain mapping using MRI. J Magn Reson Imaging 6:785–786
8.
go back to reference Stippich C, Blatow M, and Delmaire C (2007) Clinical Functional MRI: Presurgical Functional Neuroimaging, Medical Radiology/Diagnostic Imaging, Springer Verlag, Berlin, Heidelberg, New York Stippich C, Blatow M, and Delmaire C (2007) Clinical Functional MRI: Presurgical Functional Neuroimaging, Medical Radiology/Diagnostic Imaging, Springer Verlag, Berlin, Heidelberg, New York
9.
go back to reference Rombouts SARB, Barkhof F, and Scheltens P (2008), Clinical Applications of Functional Brain MRI, Oxford University Press, Oxford, UK Rombouts SARB, Barkhof F, and Scheltens P (2008), Clinical Applications of Functional Brain MRI, Oxford University Press, Oxford, UK
10.
go back to reference Huettel SA, Song AW, and McCarthy G (2008) Functional Magnetic Resonance Imaging, Second edition; Sinauer Associates, Sunderland MA, USA Huettel SA, Song AW, and McCarthy G (2008) Functional Magnetic Resonance Imaging, Second edition; Sinauer Associates, Sunderland MA, USA
11.
go back to reference Logothetis NK (2008) What we can do and what we cannot do with fMRI. Nature 7197:869–878 Logothetis NK (2008) What we can do and what we cannot do with fMRI. Nature 7197:869–878
12.
go back to reference Logothetis NK, Pauls J, Augath M et al (2001) Neurophysiological investigation of the basis of the fMRI signal. Nature 6843:150–157 Logothetis NK, Pauls J, Augath M et al (2001) Neurophysiological investigation of the basis of the fMRI signal. Nature 6843:150–157
13.
go back to reference Cohen ER, Ugurbil K, Kim SG (2002) Effect of basal conditions on the magnitude and dynamics of the blood oxygenation level-dependent fMRI response. J Cereb Blood Flow Metab 9:1042–1053 Cohen ER, Ugurbil K, Kim SG (2002) Effect of basal conditions on the magnitude and dynamics of the blood oxygenation level-dependent fMRI response. J Cereb Blood Flow Metab 9:1042–1053
14.
go back to reference Magalhaes AC (2005) Functional magnetic resonance and spectroscopy in drug and substance abuse. Top Magn Reson Imaging 3:247–251 Magalhaes AC (2005) Functional magnetic resonance and spectroscopy in drug and substance abuse. Top Magn Reson Imaging 3:247–251
15.
go back to reference Jacobsen LK, Gore JC, Skudlarski P et al (2002) Impact of intravenous nicotine on BOLD signal response to photic stimulation. Magn Reson Imaging 2:141–145 Jacobsen LK, Gore JC, Skudlarski P et al (2002) Impact of intravenous nicotine on BOLD signal response to photic stimulation. Magn Reson Imaging 2:141–145
16.
go back to reference Seifritz E, Bilecen D, Hanggi D et al (2000) Effect of ethanol on BOLD response to acoustic stimulation: implications for neuropharmacological fMRI. Psychiatry Res 1:1–13 Seifritz E, Bilecen D, Hanggi D et al (2000) Effect of ethanol on BOLD response to acoustic stimulation: implications for neuropharmacological fMRI. Psychiatry Res 1:1–13
17.
go back to reference Borgwardt SJ, Allen P, Bhattacharyya S et al (2008) Neural Basis of Delta-9-Tetrahydrocannabinol and Cannabidiol: Effects During Response Inhibition. Biol Psychiatry 11:966–973 Borgwardt SJ, Allen P, Bhattacharyya S et al (2008) Neural Basis of Delta-9-Tetrahydrocannabinol and Cannabidiol: Effects During Response Inhibition. Biol Psychiatry 11:966–973
18.
go back to reference Bruhn H, Kleinschmidt A, Boecker H et al (1994) The effect of acetazolamide on regional cerebral blood oxygenation at rest and under stimulation as assessed by MRI. J Cereb Blood Flow Metab 5:742–748 Bruhn H, Kleinschmidt A, Boecker H et al (1994) The effect of acetazolamide on regional cerebral blood oxygenation at rest and under stimulation as assessed by MRI. J Cereb Blood Flow Metab 5:742–748
19.
go back to reference Mulderink TA, Gitelman DR, Mesulam MM et al (2002) On the use of caffeine as a contrast booster for BOLD fMRI studies. Neuroimage 1:37–44 Mulderink TA, Gitelman DR, Mesulam MM et al (2002) On the use of caffeine as a contrast booster for BOLD fMRI studies. Neuroimage 1:37–44
20.
go back to reference Morton DW, Maravilla KR, Meno JR et al (2002) Systemic theophylline augments the blood oxygen level-dependent response to forepaw stimulation in rats. AJNR Am J Neuroradiol 4:588–593 Morton DW, Maravilla KR, Meno JR et al (2002) Systemic theophylline augments the blood oxygen level-dependent response to forepaw stimulation in rats. AJNR Am J Neuroradiol 4:588–593
21.
go back to reference Chen CM, Hou BL, Holodny AI (2008) Effect of age and tumor grade on BOLD functional MR imaging in preoperative assessment of patients with glioma. Radiology 3:971–978 Chen CM, Hou BL, Holodny AI (2008) Effect of age and tumor grade on BOLD functional MR imaging in preoperative assessment of patients with glioma. Radiology 3:971–978
22.
go back to reference Carusone LM, Srinivasan J, Gitelman DR et al (2002) Hemodynamic response changes in cerebrovascular disease: implications for functional MR imaging. AJNR Am J Neuroradiol 7:1222–1228 Carusone LM, Srinivasan J, Gitelman DR et al (2002) Hemodynamic response changes in cerebrovascular disease: implications for functional MR imaging. AJNR Am J Neuroradiol 7:1222–1228
23.
go back to reference Aguirre GK, Zarahn E, D’esposito M (1998) The variability of human, BOLD hemodynamic responses. Neuroimage 4:360–369 Aguirre GK, Zarahn E, D’esposito M (1998) The variability of human, BOLD hemodynamic responses. Neuroimage 4:360–369
24.
go back to reference Huettel SA, McCarthy G (2001) Regional differences in the refractory period of the hemodynamic response: an event-related fMRI study. Neuroimage 5:967–976 Huettel SA, McCarthy G (2001) Regional differences in the refractory period of the hemodynamic response: an event-related fMRI study. Neuroimage 5:967–976
25.
go back to reference Saad ZS, Ropella KM, Cox RW et al (2001) Analysis and use of FMRI response delays. Hum Brain Mapp 2:74–93 Saad ZS, Ropella KM, Cox RW et al (2001) Analysis and use of FMRI response delays. Hum Brain Mapp 2:74–93
26.
go back to reference Haller S, Wetzel SG, Radue EW et al (2006) Mapping continuous neuronal activation without an ON-OFF paradigm: initial results of BOLD ceiling fMRI. Eur J Neurosci 9:2672–2678 Haller S, Wetzel SG, Radue EW et al (2006) Mapping continuous neuronal activation without an ON-OFF paradigm: initial results of BOLD ceiling fMRI. Eur J Neurosci 9:2672–2678
27.
go back to reference Haller S, Bonati LH, Rick J et al (2008) Reduced Cerebrovascular Reserve at CO2 BOLD MR Imaging Is Associated with Increased Risk of Periinterventional Ischemic Lesions during Carotid Endarterectomy or Stent Placement: Preliminary Results. Radiology 1:251–258 Haller S, Bonati LH, Rick J et al (2008) Reduced Cerebrovascular Reserve at CO2 BOLD MR Imaging Is Associated with Increased Risk of Periinterventional Ischemic Lesions during Carotid Endarterectomy or Stent Placement: Preliminary Results. Radiology 1:251–258
28.
go back to reference Rostrup E, Law I, Blinkenberg M et al (2000) Regional differences in the CBF and BOLD responses to hypercapnia: a combined PET and fMRI study. Neuroimage 2:87–97 Rostrup E, Law I, Blinkenberg M et al (2000) Regional differences in the CBF and BOLD responses to hypercapnia: a combined PET and fMRI study. Neuroimage 2:87–97
29.
go back to reference Preibisch C, Haase A (2001) Perfusion imaging using spin-labeling methods: contrast-to-noise comparison in functional MRI applications. Magn Reson Med 1:172–182 Preibisch C, Haase A (2001) Perfusion imaging using spin-labeling methods: contrast-to-noise comparison in functional MRI applications. Magn Reson Med 1:172–182
30.
go back to reference Helenius J, Perkio J, Soinne L et al (2003) Cerebral hemodynamics in a healthy population measured by dynamic susceptibility contrast MR imaging. Acta Radiol 5:538–546 Helenius J, Perkio J, Soinne L et al (2003) Cerebral hemodynamics in a healthy population measured by dynamic susceptibility contrast MR imaging. Acta Radiol 5:538–546
31.
go back to reference Wise RG, Ide K, Poulin MJ et al (2004) Resting fluctuations in arterial carbon dioxide induce significant low frequency variations in BOLD signal. Neuroimage 4:1652–1664 Wise RG, Ide K, Poulin MJ et al (2004) Resting fluctuations in arterial carbon dioxide induce significant low frequency variations in BOLD signal. Neuroimage 4:1652–1664
32.
go back to reference van der Zande FH, Hofman PA, Backes WH (2005) Mapping hypercapnia-induced cerebrovascular reactivity using BOLD MRI. Neuroradiology 2:114–120 van der Zande FH, Hofman PA, Backes WH (2005) Mapping hypercapnia-induced cerebrovascular reactivity using BOLD MRI. Neuroradiology 2:114–120
33.
go back to reference D’Arcy RC, Hamilton A, Jarmasz M et al (2006) Exploratory data analysis reveals visuovisual interhemispheric transfer in functional magnetic resonance imaging. Magn Reson Med 4:952–958 D’Arcy RC, Hamilton A, Jarmasz M et al (2006) Exploratory data analysis reveals visuovisual interhemispheric transfer in functional magnetic resonance imaging. Magn Reson Med 4:952–958
34.
go back to reference Mazerolle EL, D’Arcy RC, and Beyea SD (2008) Detecting functional magnetic resonance imaging activation in white matter: interhemispheric transfer across the corpus callosum. BMC Neurosci 9:84 Mazerolle EL, D’Arcy RC, and Beyea SD (2008) Detecting functional magnetic resonance imaging activation in white matter: interhemispheric transfer across the corpus callosum. BMC Neurosci 9:84
35.
go back to reference Corbetta M, Miezin FM, Dobmeyer S et al (1990) Attentional modulation of neural processing of shape, color, and velocity in humans. Science 4962:1556–1559 Corbetta M, Miezin FM, Dobmeyer S et al (1990) Attentional modulation of neural processing of shape, color, and velocity in humans. Science 4962:1556–1559
36.
go back to reference Braitenberg V, Schuez A (1998) Cortex: Statistics and Geometry of Neuronal Connectivity, 2nd edn. Springer, Berlin Braitenberg V, Schuez A (1998) Cortex: Statistics and Geometry of Neuronal Connectivity, 2nd edn. Springer, Berlin
37.
go back to reference Jueptner M, Weiller C (1995) Review: does measurement of regional cerebral blood flow reflect synaptic activity. Implications for PET and fMRI. Neuroimage 2:148–156 Jueptner M, Weiller C (1995) Review: does measurement of regional cerebral blood flow reflect synaptic activity. Implications for PET and fMRI. Neuroimage 2:148–156
38.
go back to reference Stefanovic B, Warnking JM, Pike GB (2004) Hemodynamic and metabolic responses to neuronal inhibition. Neuroimage 2:771–778 Stefanovic B, Warnking JM, Pike GB (2004) Hemodynamic and metabolic responses to neuronal inhibition. Neuroimage 2:771–778
39.
go back to reference Shmuel A, Yacoub E, Pfeuffer J et al (2002) Sustained negative BOLD, blood flow and oxygen consumption response and its coupling to the positive response in the human brain. Neuron 6:1195–1210 Shmuel A, Yacoub E, Pfeuffer J et al (2002) Sustained negative BOLD, blood flow and oxygen consumption response and its coupling to the positive response in the human brain. Neuron 6:1195–1210
40.
go back to reference Shmuel A, Augath M, Oeltermann A et al (2006) Negative functional MRI response correlates with decreases in neuronal activity in monkey visual area V1. Nat Neurosci 4:569–577 Shmuel A, Augath M, Oeltermann A et al (2006) Negative functional MRI response correlates with decreases in neuronal activity in monkey visual area V1. Nat Neurosci 4:569–577
41.
go back to reference Uludag K, Dubowitz DJ, Yoder EJ et al (2004) Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI. Neuroimage 1:148–155 Uludag K, Dubowitz DJ, Yoder EJ et al (2004) Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI. Neuroimage 1:148–155
42.
go back to reference Friston KJ, Price CJ, Fletcher P et al (1996) The trouble with cognitive subtraction. Neuroimage 2:97–104 Friston KJ, Price CJ, Fletcher P et al (1996) The trouble with cognitive subtraction. Neuroimage 2:97–104
43.
go back to reference Binder JR, Swanson SJ, Hammeke TA et al (2008) A comparison of five fMRI protocols for mapping speech comprehension systems. Epilepsia 12:1980–1997 Binder JR, Swanson SJ, Hammeke TA et al (2008) A comparison of five fMRI protocols for mapping speech comprehension systems. Epilepsia 12:1980–1997
44.
go back to reference Amaro EJ, Barker GJ (2006) Study design in fMRI: basic principles. Brain Cogn 3:220–232 Amaro EJ, Barker GJ (2006) Study design in fMRI: basic principles. Brain Cogn 3:220–232
45.
go back to reference Cunnington R, Windischberger C, Deecke L et al (2002) The preparation and execution of self-initiated and externally-triggered movement: a study of event-related fMRI. Neuroimage 2:373–385 Cunnington R, Windischberger C, Deecke L et al (2002) The preparation and execution of self-initiated and externally-triggered movement: a study of event-related fMRI. Neuroimage 2:373–385
46.
go back to reference Buckner RL, Bandettini PA, O’Craven KM et al (1996) Detection of cortical activation during averaged single trials of a cognitive task using functional magnetic resonance imaging. Proc Natl Acad Sci USA 25:14878–14883 Buckner RL, Bandettini PA, O’Craven KM et al (1996) Detection of cortical activation during averaged single trials of a cognitive task using functional magnetic resonance imaging. Proc Natl Acad Sci USA 25:14878–14883
47.
go back to reference Friston KJ, Fletcher P, Josephs O et al (1998) Event-related fMRI: characterizing differential responses. Neuroimage 1:30–40 Friston KJ, Fletcher P, Josephs O et al (1998) Event-related fMRI: characterizing differential responses. Neuroimage 1:30–40
48.
go back to reference Burock MA, Buckner RL, Woldorff MG et al (1998) Randomized event-related experimental designs allow for extremely rapid presentation rates using functional MRI. Neuroreport 16:3735–3739 Burock MA, Buckner RL, Woldorff MG et al (1998) Randomized event-related experimental designs allow for extremely rapid presentation rates using functional MRI. Neuroreport 16:3735–3739
49.
go back to reference Biswal B, Yetkin FZ, Haughton VM et al (1995) Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 4:537–541 Biswal B, Yetkin FZ, Haughton VM et al (1995) Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 4:537–541
50.
go back to reference Damoiseaux JS, Rombouts SA, Barkhof F et al (2006) Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci USA 37:13848–13853 Damoiseaux JS, Rombouts SA, Barkhof F et al (2006) Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci USA 37:13848–13853
51.
go back to reference Sorg C, Riedl V, Muhlau M et al (2007) Selective changes of resting-state networks in individuals at risk for Alzheimer’s disease. Proc Natl Acad Sci USA 47:18760–18765 Sorg C, Riedl V, Muhlau M et al (2007) Selective changes of resting-state networks in individuals at risk for Alzheimer’s disease. Proc Natl Acad Sci USA 47:18760–18765
52.
go back to reference Hajnal JV, Myers R, Oatridge A et al (1994) Artifacts due to stimulus correlated motion in functional imaging of the brain. Magn Reson Med 3:283–291 Hajnal JV, Myers R, Oatridge A et al (1994) Artifacts due to stimulus correlated motion in functional imaging of the brain. Magn Reson Med 3:283–291
53.
go back to reference Smith SM, Jenkinson M, Woolrich MW et al (2004) Advances in functional and structural MR image analysis and implementation as FSL. Neuroimage 23 Suppl 1:S208–19 Smith SM, Jenkinson M, Woolrich MW et al (2004) Advances in functional and structural MR image analysis and implementation as FSL. Neuroimage 23 Suppl 1:S208–19
54.
go back to reference Soltysik DA, Hyde JS (2006) Strategies for block-design fMRI experiments during task-related motion of structures of the oral cavity. Neuroimage 4:1260–1271 Soltysik DA, Hyde JS (2006) Strategies for block-design fMRI experiments during task-related motion of structures of the oral cavity. Neuroimage 4:1260–1271
55.
go back to reference Heim S, Amunts K, Mohlberg H et al (2006) Head motion during overt language production in functional magnetic resonance imaging. Neuroreport 6:579–582 Heim S, Amunts K, Mohlberg H et al (2006) Head motion during overt language production in functional magnetic resonance imaging. Neuroreport 6:579–582
56.
go back to reference Edward V, Windischberger C, Cunnington R et al (2000) Quantification of fMRI artifact reduction by a novel plaster cast head holder. Hum Brain Mapp 3:207–213 Edward V, Windischberger C, Cunnington R et al (2000) Quantification of fMRI artifact reduction by a novel plaster cast head holder. Hum Brain Mapp 3:207–213
57.
go back to reference Bandettini PA, Wong EC, Hinks RS et al (1992) Time course EPI of human brain function during task activation. Magn Reson Med 2:390–397 Bandettini PA, Wong EC, Hinks RS et al (1992) Time course EPI of human brain function during task activation. Magn Reson Med 2:390–397
58.
go back to reference Ogawa S, Menon RS, Tank DW et al (1993) Functional brain mapping by blood oxygenation level-dependent contrast magnetic resonance imaging. A comparison of signal characteristics with a biophysical model. Biophys J 3:803–812 Ogawa S, Menon RS, Tank DW et al (1993) Functional brain mapping by blood oxygenation level-dependent contrast magnetic resonance imaging. A comparison of signal characteristics with a biophysical model. Biophys J 3:803–812
59.
go back to reference Thulborn KR, Chang SY, Shen GX et al (1997) High-resolution echo-planar fMRI of human visual cortex at 3.0 tesla. NMR Biomed 4–5:183–190 Thulborn KR, Chang SY, Shen GX et al (1997) High-resolution echo-planar fMRI of human visual cortex at 3.0 tesla. NMR Biomed 4–5:183–190
60.
go back to reference Wegner C, Filippi M, Korteweg T et al (2008) Relating functional changes during hand movement to clinical parameters in patients with multiple sclerosis in a multi-centre fMRI study. Eur J Neurol 2:113–122 Wegner C, Filippi M, Korteweg T et al (2008) Relating functional changes during hand movement to clinical parameters in patients with multiple sclerosis in a multi-centre fMRI study. Eur J Neurol 2:113–122
61.
go back to reference Schulte AC, Speck O, Oesterle C et al (2001) Separation and quantification of perfusion and BOLD effects by simultaneous acquisition of functional I(0)- and T2(*)-parameter maps. Magn Reson Med 5:811–816 Schulte AC, Speck O, Oesterle C et al (2001) Separation and quantification of perfusion and BOLD effects by simultaneous acquisition of functional I(0)- and T2(*)-parameter maps. Magn Reson Med 5:811–816
62.
go back to reference Schmitz BL, Aschoff AJ, Hoffmann MH et al (2005) Advantages and pitfalls in 3T MR brain imaging: a pictorial review. AJNR Am J Neuroradiol 9:2229–2237 Schmitz BL, Aschoff AJ, Hoffmann MH et al (2005) Advantages and pitfalls in 3T MR brain imaging: a pictorial review. AJNR Am J Neuroradiol 9:2229–2237
63.
go back to reference Duong TQ, Yacoub E, Adriany G et al (2003) Microvascular BOLD contribution at 4 and 7 T in the human brain: gradient-echo and spin-echo fMRI with suppression of blood effects. Magn Reson Med 6:1019–1027 Duong TQ, Yacoub E, Adriany G et al (2003) Microvascular BOLD contribution at 4 and 7 T in the human brain: gradient-echo and spin-echo fMRI with suppression of blood effects. Magn Reson Med 6:1019–1027
64.
go back to reference Karakas S, Kavakli A (2005) Morphometric examination of the paranasal sinuses and mastoid air cells using computed tomography. Ann Saudi Med 1:41–45 Karakas S, Kavakli A (2005) Morphometric examination of the paranasal sinuses and mastoid air cells using computed tomography. Ann Saudi Med 1:41–45
65.
go back to reference Blaimer M, Breuer F, Mueller M et al (2004) SMASH, SENSE, PILS, GRAPPA: how to choose the optimal method. Top Magn Reson Imaging 4:223–236 Blaimer M, Breuer F, Mueller M et al (2004) SMASH, SENSE, PILS, GRAPPA: how to choose the optimal method. Top Magn Reson Imaging 4:223–236
66.
go back to reference Dietrich O, Raya JG, Reeder SB et al (2008) Influence of multichannel combination, parallel imaging and other reconstruction techniques on MRI noise characteristics. Magn Reson Imaging 6:754–762 Dietrich O, Raya JG, Reeder SB et al (2008) Influence of multichannel combination, parallel imaging and other reconstruction techniques on MRI noise characteristics. Magn Reson Imaging 6:754–762
67.
go back to reference Dietrich O, Raya JG, Reeder SB et al (2007) Measurement of signal-to-noise ratios in MR images: influence of multichannel coils, parallel imaging, and reconstruction filters. J Magn Reson Imaging 2:375–385 Dietrich O, Raya JG, Reeder SB et al (2007) Measurement of signal-to-noise ratios in MR images: influence of multichannel coils, parallel imaging, and reconstruction filters. J Magn Reson Imaging 2:375–385
68.
go back to reference Bandettini PA, Jesmanowicz A, Van Kylen J et al (1998) Functional MRI of brain activation induced by scanner acoustic noise. Magn Reson Med 3:410–416 Bandettini PA, Jesmanowicz A, Van Kylen J et al (1998) Functional MRI of brain activation induced by scanner acoustic noise. Magn Reson Med 3:410–416
69.
go back to reference Hall DA, Haggard MP, Akeroyd MA et al (1999) “Sparse” temporal sampling in auditory fMRI. Hum Brain Mapp 3:213–223 Hall DA, Haggard MP, Akeroyd MA et al (1999) “Sparse” temporal sampling in auditory fMRI. Hum Brain Mapp 3:213–223
70.
go back to reference Seifritz E, Di Salle F, Esposito F et al (2006) Enhancing BOLD response in the auditory system by neurophysiologically tuned fMRI sequence. Neuroimage 3:1013–1022 Seifritz E, Di Salle F, Esposito F et al (2006) Enhancing BOLD response in the auditory system by neurophysiologically tuned fMRI sequence. Neuroimage 3:1013–1022
71.
go back to reference Giraud AL, Lorenzi C, Ashburner J et al (2000) Representation of the temporal envelope of sounds in the human brain. J Neurophysiol 3:1588–1598 Giraud AL, Lorenzi C, Ashburner J et al (2000) Representation of the temporal envelope of sounds in the human brain. J Neurophysiol 3:1588–1598
72.
go back to reference Fox PT, Raichle ME (1984) Stimulus rate dependence of regional cerebral blood flow in human striate cortex, demonstrated by positron emission tomography. J Neurophysiol 5:1109–1120 Fox PT, Raichle ME (1984) Stimulus rate dependence of regional cerebral blood flow in human striate cortex, demonstrated by positron emission tomography. J Neurophysiol 5:1109–1120
73.
go back to reference Banbury SP, Macken WJ, Tremblay S et al (2001) Auditory distraction and short-term memory: phenomena and practical implications. Hum Factors 1:12–29 Banbury SP, Macken WJ, Tremblay S et al (2001) Auditory distraction and short-term memory: phenomena and practical implications. Hum Factors 1:12–29
74.
go back to reference Mazard A, Mazoyer B, Etard O et al (2002) Impact of fMRI acoustic noise on the functional anatomy of visual mental imagery. J Cogn Neurosci 2:172–186 Mazard A, Mazoyer B, Etard O et al (2002) Impact of fMRI acoustic noise on the functional anatomy of visual mental imagery. J Cogn Neurosci 2:172–186
75.
go back to reference Novitski N, Anourova I, Martinkauppi S et al (2003) Effects of noise from functional magnetic resonance imaging on auditory event-related potentials in working memory task. Neuroimage 2:1320–1328 Novitski N, Anourova I, Martinkauppi S et al (2003) Effects of noise from functional magnetic resonance imaging on auditory event-related potentials in working memory task. Neuroimage 2:1320–1328
76.
go back to reference Tomasi D, Caparelli EC, Chang L et al (2005) fMRI-acoustic noise alters brain activation during working memory tasks. Neuroimage 2:377–386 Tomasi D, Caparelli EC, Chang L et al (2005) fMRI-acoustic noise alters brain activation during working memory tasks. Neuroimage 2:377–386
77.
go back to reference Haller S, Bartsch AJ, Radue EW et al (2005) Effect of fMRI acoustic noise on non-auditory working memory task: comparison between continuous and pulsed sound emitting EPI. MAGMA 5:263–271 Haller S, Bartsch AJ, Radue EW et al (2005) Effect of fMRI acoustic noise on non-auditory working memory task: comparison between continuous and pulsed sound emitting EPI. MAGMA 5:263–271
78.
go back to reference Bartsch AJ and Specht K (2003) Detection of the scanner’s genuine gradient noise by functional echo planar imaging. Riv Neuroradiol 16:995–1000 Bartsch AJ and Specht K (2003) Detection of the scanner’s genuine gradient noise by functional echo planar imaging. Riv Neuroradiol 16:995–1000
79.
go back to reference Seifritz E, Esposito F, Hennel F et al (2002) Spatiotemporal pattern of neural processing in the human auditory cortex. Science 5587:1706–1708 Seifritz E, Esposito F, Hennel F et al (2002) Spatiotemporal pattern of neural processing in the human auditory cortex. Science 5587:1706–1708
80.
go back to reference Bartsch AJ, Homola G, Thesen S et al (2007) Scanning for the scanner: FMRI of audition by read-out omissions from echo-planar imaging. Neuroimage 1:234–243 Bartsch AJ, Homola G, Thesen S et al (2007) Scanning for the scanner: FMRI of audition by read-out omissions from echo-planar imaging. Neuroimage 1:234–243
81.
go back to reference Smith SM, Nichols TE (2009) Threshold-free cluster enhancement: Addressing problems of smoothing, threshold dependence and localisation in cluster inference. Neuroimage 1:83–98 Smith SM, Nichols TE (2009) Threshold-free cluster enhancement: Addressing problems of smoothing, threshold dependence and localisation in cluster inference. Neuroimage 1:83–98
82.
go back to reference Friston KJ, Holmes AP, Worsley KJ et al (1995) Statistical Parametric Maps in Functional Imaging: A General Linear Approach. Hum Brain Mapp 2:189–210 Friston KJ, Holmes AP, Worsley KJ et al (1995) Statistical Parametric Maps in Functional Imaging: A General Linear Approach. Hum Brain Mapp 2:189–210
83.
go back to reference Beckmann CF, Smith SM (2004) Probabilistic independent component analysis for functional magnetic resonance imaging. IEEE Trans Med Imaging 2:137–152 Beckmann CF, Smith SM (2004) Probabilistic independent component analysis for functional magnetic resonance imaging. IEEE Trans Med Imaging 2:137–152
84.
go back to reference Beckmann CF, Smith SM (2005) Tensorial extensions of independent component analysis for multisubject FMRI analysis. Neuroimage 1:294–311 Beckmann CF, Smith SM (2005) Tensorial extensions of independent component analysis for multisubject FMRI analysis. Neuroimage 1:294–311
85.
go back to reference Calhoun VD, Adali T, Pearlson GD et al (2001) A method for making group inferences from functional MRI data using independent component analysis. Hum Brain Mapp 3:140–151 Calhoun VD, Adali T, Pearlson GD et al (2001) A method for making group inferences from functional MRI data using independent component analysis. Hum Brain Mapp 3:140–151
86.
go back to reference Guo Y, Pagnoni G (2008) A unified framework for group independent component analysis for multi-subject fMRI data. Neuroimage 3:1078–1093 Guo Y, Pagnoni G (2008) A unified framework for group independent component analysis for multi-subject fMRI data. Neuroimage 3:1078–1093
87.
go back to reference Logan BR, Rowe DB (2004) An evaluation of thresholding techniques in fMRI analysis. Neuroimage 1:95–108 Logan BR, Rowe DB (2004) An evaluation of thresholding techniques in fMRI analysis. Neuroimage 1:95–108
88.
go back to reference Woolrich MW, Ripley BD, Brady M et al (2001) Temporal autocorrelation in univariate linear modeling of FMRI data. Neuroimage 6:1370–1386 Woolrich MW, Ripley BD, Brady M et al (2001) Temporal autocorrelation in univariate linear modeling of FMRI data. Neuroimage 6:1370–1386
89.
go back to reference Friston KJ, Worsley KJ, Frackowiak RSJ et al (1994) Assessing the Significance of Focal Activations Using their Spatial Extent. Hum Brain Mapp 1:214–220 Friston KJ, Worsley KJ, Frackowiak RSJ et al (1994) Assessing the Significance of Focal Activations Using their Spatial Extent. Hum Brain Mapp 1:214–220
90.
go back to reference Worsley KJ (2005) An improved theoretical P value for SPMs based on discrete local maxima. Neuroimage 4:1056–1062 Worsley KJ (2005) An improved theoretical P value for SPMs based on discrete local maxima. Neuroimage 4:1056–1062
91.
go back to reference Genovese CR, Lazar NA, Nichols T (2002) Thresholding of statistical maps in functional neuroimaging using the false discovery rate. Neuroimage 4:870–878 Genovese CR, Lazar NA, Nichols T (2002) Thresholding of statistical maps in functional neuroimaging using the false discovery rate. Neuroimage 4:870–878
92.
go back to reference Hartvig NV, Jensen JL (2000) Spatial mixture modeling of fMRI data. Hum Brain Mapp 4:233–248 Hartvig NV, Jensen JL (2000) Spatial mixture modeling of fMRI data. Hum Brain Mapp 4:233–248
93.
go back to reference Beckmann CF, Woolrich MW, Smith SM (2003) Gaussian/Gamma mixture modelling of ICA/GLM spatial maps. Ninth International Conference on Functional Mapping of the Human Brain 2:S985 Beckmann CF, Woolrich MW, Smith SM (2003) Gaussian/Gamma mixture modelling of ICA/GLM spatial maps. Ninth International Conference on Functional Mapping of the Human Brain 2:S985
94.
go back to reference Woolrich MW, Behrens TE, Beckmann CF et al (2005) Mixture models with adaptive spatial regularization for segmentation with an application to FMRI data. IEEE Trans Med Imaging 1:1–11 Woolrich MW, Behrens TE, Beckmann CF et al (2005) Mixture models with adaptive spatial regularization for segmentation with an application to FMRI data. IEEE Trans Med Imaging 1:1–11
95.
go back to reference Bartsch AJ, Homola G, Biller A et al (2006) Diagnostic functional MRI: illustrated clinical applications and decision-making. J Magn Reson Imaging 6:921–932 Bartsch AJ, Homola G, Biller A et al (2006) Diagnostic functional MRI: illustrated clinical applications and decision-making. J Magn Reson Imaging 6:921–932
96.
go back to reference Friston KJ, Holmes AP, Price CJ et al (1999) Multisubject fMRI studies and conjunction analyses. Neuroimage 4:385–396 Friston KJ, Holmes AP, Price CJ et al (1999) Multisubject fMRI studies and conjunction analyses. Neuroimage 4:385–396
97.
go back to reference Beckmann CF, Jenkinson M, Smith SM (2003) General multilevel linear modeling for group analysis in FMRI. Neuroimage 2:1052–1063 Beckmann CF, Jenkinson M, Smith SM (2003) General multilevel linear modeling for group analysis in FMRI. Neuroimage 2:1052–1063
98.
go back to reference Woolrich MW, Behrens TE, Beckmann CF et al (2004) Multilevel linear modelling for FMRI group analysis using Bayesian inference. Neuroimage 4:1732–1747 Woolrich MW, Behrens TE, Beckmann CF et al (2004) Multilevel linear modelling for FMRI group analysis using Bayesian inference. Neuroimage 4:1732–1747
99.
go back to reference Friston KJ, Holmes AP, Worsley KJ (1999) How many subjects constitute a study. Neuroimage 1:1–5 Friston KJ, Holmes AP, Worsley KJ (1999) How many subjects constitute a study. Neuroimage 1:1–5
100.
go back to reference Price CJ, Friston KJ (1997) Cognitive conjunction: a new approach to brain activation experiments. Neuroimage 4 Pt 1:261–270 Price CJ, Friston KJ (1997) Cognitive conjunction: a new approach to brain activation experiments. Neuroimage 4 Pt 1:261–270
101.
go back to reference Nichols T, Brett M, Andersson J et al (2005) Valid conjunction inference with the minimum statistic. Neuroimage 3:653–660 Nichols T, Brett M, Andersson J et al (2005) Valid conjunction inference with the minimum statistic. Neuroimage 3:653–660
102.
go back to reference Seghier ML (2008) Laterality index in functional MRI: methodological issues. Magn Reson Imaging 5:594–601 Seghier ML (2008) Laterality index in functional MRI: methodological issues. Magn Reson Imaging 5:594–601
103.
go back to reference Richter W, Ugurbil K, Georgopoulos A et al (1997) Time-resolved fMRI of mental rotation. Neuroreport 17:3697–3702CrossRef Richter W, Ugurbil K, Georgopoulos A et al (1997) Time-resolved fMRI of mental rotation. Neuroreport 17:3697–3702CrossRef
104.
go back to reference Menon RS, Luknowsky DC, Gati JS (1998) Mental chronometry using latency-resolved functional MRI. Proc Natl Acad Sci USA 18:10902–10907 Menon RS, Luknowsky DC, Gati JS (1998) Mental chronometry using latency-resolved functional MRI. Proc Natl Acad Sci USA 18:10902–10907
105.
go back to reference Formisano E, Linden DE, Di Salle F et al (2002) Tracking the mind’s image in the brain I: time-resolved fMRI during visuospatial mental imagery. Neuron 1:185–194 Formisano E, Linden DE, Di Salle F et al (2002) Tracking the mind’s image in the brain I: time-resolved fMRI during visuospatial mental imagery. Neuron 1:185–194
106.
go back to reference Hernandez L, Badre D, Noll D et al (2002) Temporal sensitivity of event-related fMRI. Neuroimage 2:1018–1026 Hernandez L, Badre D, Noll D et al (2002) Temporal sensitivity of event-related fMRI. Neuroimage 2:1018–1026
107.
go back to reference Bellgowan PS, Saad ZS, Bandettini PA (2003) Understanding neural system dynamics through task modulation and measurement of functional MRI amplitude, latency, and width. Proc Natl Acad Sci USA 3:1415–1419 Bellgowan PS, Saad ZS, Bandettini PA (2003) Understanding neural system dynamics through task modulation and measurement of functional MRI amplitude, latency, and width. Proc Natl Acad Sci USA 3:1415–1419
108.
go back to reference Haller S, Klarhoefer M, Schwarzbach J et al (2007) Spatial and temporal analysis of fMRI data on word and sentence reading. Eur J Neurosci 7:2074–2084 Haller S, Klarhoefer M, Schwarzbach J et al (2007) Spatial and temporal analysis of fMRI data on word and sentence reading. Eur J Neurosci 7:2074–2084
109.
go back to reference Woolrich MW, Jenkinson M, Brady JM et al (2004) Fully Bayesian spatio-temporal modeling of FMRI data. IEEE Trans Med Imaging 2:213–231 Woolrich MW, Jenkinson M, Brady JM et al (2004) Fully Bayesian spatio-temporal modeling of FMRI data. IEEE Trans Med Imaging 2:213–231
110.
go back to reference Woolrich MW, Behrens TE, Smith SM (2004) Constrained linear basis sets for HRF modelling using Variational Bayes. Neuroimage 4:1748–1761 Woolrich MW, Behrens TE, Smith SM (2004) Constrained linear basis sets for HRF modelling using Variational Bayes. Neuroimage 4:1748–1761
111.
go back to reference Broca P (1861) Remarques sur le siège de la faculté de langage articulé, suives d’une observation d’aphémie (perte de la parole). Bulletin de la Societe de Anatomie 36:330–357 Broca P (1861) Remarques sur le siège de la faculté de langage articulé, suives d’une observation d’aphémie (perte de la parole). Bulletin de la Societe de Anatomie 36:330–357
112.
go back to reference Hamzei F, Rijntjes M, Dettmers C et al (2003) The human action recognition system and its relationship to Broca’s area: an fMRI study. Neuroimage 3:637–644 Hamzei F, Rijntjes M, Dettmers C et al (2003) The human action recognition system and its relationship to Broca’s area: an fMRI study. Neuroimage 3:637–644
113.
go back to reference Hagoort P (2005) On Broca, brain, and binding: a new framework. Trends Cogn Sci 9:416–423PubMed Hagoort P (2005) On Broca, brain, and binding: a new framework. Trends Cogn Sci 9:416–423PubMed
114.
go back to reference Mesulam MM (1998) From sensation to cognition. Brain Pt 6:1013–1052 Mesulam MM (1998) From sensation to cognition. Brain Pt 6:1013–1052
115.
go back to reference Haxby JV, Gobbini MI, Furey ML et al (2001) Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 5539:2425–2430 Haxby JV, Gobbini MI, Furey ML et al (2001) Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 5539:2425–2430
116.
go back to reference Bogomolny DL, Petrovich NM, Hou BL et al (2004) Functional MRI in the Brain Tumor Patient. Topics in Magnetic Resonance Imaging 5:325 Bogomolny DL, Petrovich NM, Hou BL et al (2004) Functional MRI in the Brain Tumor Patient. Topics in Magnetic Resonance Imaging 5:325
117.
go back to reference Sunaert S (2006) Presurgical planning for tumor resectioning. J Magn Reson Imaging 6:887–905 Sunaert S (2006) Presurgical planning for tumor resectioning. J Magn Reson Imaging 6:887–905
118.
go back to reference Sperling R (2007) Functional MRI studies of associative encoding in normal aging, mild cognitive impairment, and Alzheimer’s disease. Ann NY Acad Sci 1097:146–155 Sperling R (2007) Functional MRI studies of associative encoding in normal aging, mild cognitive impairment, and Alzheimer’s disease. Ann NY Acad Sci 1097:146–155
119.
go back to reference Fusar-Poli P, Perez J, Broome M et al (2007) Neurofunctional correlates of vulnerability to psychosis: a systematic review and meta-analysis. Neurosci Biobehav Rev 4:465–484 Fusar-Poli P, Perez J, Broome M et al (2007) Neurofunctional correlates of vulnerability to psychosis: a systematic review and meta-analysis. Neurosci Biobehav Rev 4:465–484
120.
go back to reference Hsu YY, Chang CN, Jung SM et al (2004) Blood oxygenation level-dependent MRI of cerebral gliomas during breath holding. J Magn Reson Imaging 2:160–167 Hsu YY, Chang CN, Jung SM et al (2004) Blood oxygenation level-dependent MRI of cerebral gliomas during breath holding. J Magn Reson Imaging 2:160–167
121.
go back to reference Fujiwara N, Sakatani K, Katayama Y et al (2004) Evoked-cerebral blood oxygenation changes in false-negative activations in BOLD contrast functional MRI of patients with brain tumors. Neuroimage 4:1464–1471 Fujiwara N, Sakatani K, Katayama Y et al (2004) Evoked-cerebral blood oxygenation changes in false-negative activations in BOLD contrast functional MRI of patients with brain tumors. Neuroimage 4:1464–1471
122.
go back to reference Kim MJ, Holodny AI, Hou BL et al (2005) The effect of prior surgery on blood oxygen level-dependent functional MR imaging in the preoperative assessment of brain tumors. AJNR Am J Neuroradiol 8:1980–1985 Kim MJ, Holodny AI, Hou BL et al (2005) The effect of prior surgery on blood oxygen level-dependent functional MR imaging in the preoperative assessment of brain tumors. AJNR Am J Neuroradiol 8:1980–1985
123.
go back to reference Vlieger EJ, Majoie CB, Leenstra S et al (2004) Functional magnetic resonance imaging for neurosurgical planning in neurooncology. Eur Radiol 7:1143–1153 Vlieger EJ, Majoie CB, Leenstra S et al (2004) Functional magnetic resonance imaging for neurosurgical planning in neurooncology. Eur Radiol 7:1143–1153
124.
go back to reference Yousry TA, Schmid UD, Alkadhi H et al (1997) Localization of the motor hand area to a knob on the precentral gyrus. A new landmark. Brain Pt 1:141–157 Yousry TA, Schmid UD, Alkadhi H et al (1997) Localization of the motor hand area to a knob on the precentral gyrus. A new landmark. Brain Pt 1:141–157
125.
go back to reference Gordon AM, Lee JH, Flament D et al (1998) Functional magnetic resonance imaging of motor, sensory, and posterior parietal cortical areas during performance of sequential typing movements. Exp Brain Res 2:153–166 Gordon AM, Lee JH, Flament D et al (1998) Functional magnetic resonance imaging of motor, sensory, and posterior parietal cortical areas during performance of sequential typing movements. Exp Brain Res 2:153–166
126.
go back to reference Chung GH, Han YM, Jeong SH et al (2005) Functional heterogeneity of the supplementary motor area. AJNR Am J Neuroradiol 7:1819–1823 Chung GH, Han YM, Jeong SH et al (2005) Functional heterogeneity of the supplementary motor area. AJNR Am J Neuroradiol 7:1819–1823
127.
go back to reference Nielsen F (2003) The Brede database: a small database for functional neuroimaging. 9th International Conference on Functional Mapping of the Human Brain 2:Available on CD-Rom. Nielsen F (2003) The Brede database: a small database for functional neuroimaging. 9th International Conference on Functional Mapping of the Human Brain 2:Available on CD-Rom.
128.
go back to reference Cabeza R, Nyberg L (2000) Imaging cognition II: An empirical review of 275 PET and fMRI studies. J Cogn Neurosci 1:1–47 Cabeza R, Nyberg L (2000) Imaging cognition II: An empirical review of 275 PET and fMRI studies. J Cogn Neurosci 1:1–47
129.
go back to reference Bookheimer S (2007) Pre-surgical language mapping with functional magnetic resonance imaging. Neuropsychol Rev 2:145–155 Bookheimer S (2007) Pre-surgical language mapping with functional magnetic resonance imaging. Neuropsychol Rev 2:145–155
130.
go back to reference Knecht S, Drager B, Deppe M et al (2000) Handedness and hemispheric language dominance in healthy humans. Brain 123:2512–2518 Knecht S, Drager B, Deppe M et al (2000) Handedness and hemispheric language dominance in healthy humans. Brain 123:2512–2518
131.
go back to reference Jorgens S, Kleiser R, Indefrey P et al (2007) Handedness and functional MRI-activation patterns in sentence processing. Neuroreport 13:1339–1343 Jorgens S, Kleiser R, Indefrey P et al (2007) Handedness and functional MRI-activation patterns in sentence processing. Neuroreport 13:1339–1343
132.
go back to reference Adcock JE, Wise RG, Oxbury JM et al (2003) Quantitative fMRI assessment of the differences in lateralization of language-related brain activation in patients with temporal lobe epilepsy. Neuroimage 2:423–438 Adcock JE, Wise RG, Oxbury JM et al (2003) Quantitative fMRI assessment of the differences in lateralization of language-related brain activation in patients with temporal lobe epilepsy. Neuroimage 2:423–438
133.
go back to reference Perani D, Abutalebi J, Paulesu E et al (2003) The role of age of acquisition and language usage in early, high-proficient bilinguals: an fMRI study during verbal fluency. Hum Brain Mapp 3:170–182 Perani D, Abutalebi J, Paulesu E et al (2003) The role of age of acquisition and language usage in early, high-proficient bilinguals: an fMRI study during verbal fluency. Hum Brain Mapp 3:170–182
134.
go back to reference Perani D, Paulesu E, Galles NS et al (1998) The bilingual brain. Proficiency and age of acquisition of the second language. Brain Pt 10:1841–1852 Perani D, Paulesu E, Galles NS et al (1998) The bilingual brain. Proficiency and age of acquisition of the second language. Brain Pt 10:1841–1852
135.
go back to reference Bloch C, Kaiser A, Kuenzli E et al (2009) The age of second language acquisition determines the variability in activation elicited by narration in three languages in Broca’s and Wernicke’s area. Neuropsychologia 47(3):625–33PubMed Bloch C, Kaiser A, Kuenzli E et al (2009) The age of second language acquisition determines the variability in activation elicited by narration in three languages in Broca’s and Wernicke’s area. Neuropsychologia 47(3):625–33PubMed
136.
go back to reference Woermann FG, Jokeit H, Luerding R et al (2003) Language lateralization by Wada test and fMRI in 100 patients with epilepsy. Neurology 5:699–701 Woermann FG, Jokeit H, Luerding R et al (2003) Language lateralization by Wada test and fMRI in 100 patients with epilepsy. Neurology 5:699–701
137.
go back to reference Roberts DW, Hartov A, Kennedy FE et al (1998) Intraoperative brain shift and deformation: a quantitative analysis of cortical displacement in 28 cases. Neurosurgery 4:749–58 discussion 758–60 Roberts DW, Hartov A, Kennedy FE et al (1998) Intraoperative brain shift and deformation: a quantitative analysis of cortical displacement in 28 cases. Neurosurgery 4:749–58 discussion 758–60
138.
go back to reference Nimsky C, Ganslandt O, Cerny S et al (2000) Quantification of, Visualization of, and Compensation for Brain Shift Using Intraoperative Magnetic Resonance Imaging. Neurosurgery 5:1070 Nimsky C, Ganslandt O, Cerny S et al (2000) Quantification of, Visualization of, and Compensation for Brain Shift Using Intraoperative Magnetic Resonance Imaging. Neurosurgery 5:1070
139.
go back to reference Kyriacou SK, Mohamed A, Miller K et al (2002) Brain mechanics For neurosurgery: modeling issues. Biomech Model Mechanobiol 2:151–164 Kyriacou SK, Mohamed A, Miller K et al (2002) Brain mechanics For neurosurgery: modeling issues. Biomech Model Mechanobiol 2:151–164
140.
go back to reference Gasser T, Ganslandt O, Sandalcioglu E et al (2005) Intraoperative functional MRI: implementation and preliminary experience. Neuroimage 3:685–693 Gasser T, Ganslandt O, Sandalcioglu E et al (2005) Intraoperative functional MRI: implementation and preliminary experience. Neuroimage 3:685–693
141.
go back to reference Roessler K, Donat M, Lanzenberger R et al (2005) Evaluation of preoperative high magnetic field motor functional MRI (3 Tesla) in glioma patients by navigated electrocortical stimulation and postoperative outcome. J Neurol Neurosurg Psychiatry 8:1152–1157 Roessler K, Donat M, Lanzenberger R et al (2005) Evaluation of preoperative high magnetic field motor functional MRI (3 Tesla) in glioma patients by navigated electrocortical stimulation and postoperative outcome. J Neurol Neurosurg Psychiatry 8:1152–1157
142.
go back to reference Haberg A, Kvistad KA, Unsgard G et al (2004) Preoperative blood oxygen level-dependent functional magnetic resonance imaging in patients with primary brain tumors: clinical application and outcome. Neurosurgery 4:902–14 discussion 914–5 Haberg A, Kvistad KA, Unsgard G et al (2004) Preoperative blood oxygen level-dependent functional magnetic resonance imaging in patients with primary brain tumors: clinical application and outcome. Neurosurgery 4:902–14 discussion 914–5
143.
go back to reference Basser PJ (1997) New histological and physiological stains derived from diffusion-tensor MR images. Ann NY Acad Sci 820:123–138 Basser PJ (1997) New histological and physiological stains derived from diffusion-tensor MR images. Ann NY Acad Sci 820:123–138
144.
go back to reference Smits M, Vernooij MW, Wielopolski PA et al (2007) Incorporating functional MR imaging into diffusion tensor tractography in the preoperative assessment of the corticospinal tract in patients with brain tumors. AJNR Am J Neuroradiol 7:1354–1361 Smits M, Vernooij MW, Wielopolski PA et al (2007) Incorporating functional MR imaging into diffusion tensor tractography in the preoperative assessment of the corticospinal tract in patients with brain tumors. AJNR Am J Neuroradiol 7:1354–1361
145.
go back to reference Kamada K, Todo T, Masutani Y et al (2007) Visualization of the frontotemporal language fibers by tractography combined with functional magnetic resonance imaging and magnetoencephalography. J Neurosurg 1:90–98 Kamada K, Todo T, Masutani Y et al (2007) Visualization of the frontotemporal language fibers by tractography combined with functional magnetic resonance imaging and magnetoencephalography. J Neurosurg 1:90–98
146.
go back to reference Bartsch AJ, Biller A, Homola G (2008) ‘Tractography for surgical targeting’. in: Johansen-Berg H and TE Behrens (Eds.), Imaging brain pathways - Diffusion MRI: from quantitative measurement to in-vivo neuroanatomy. Diffusion MRI for in-vivo neuroanatomy, Elsevier, Chapter 20 of Section 3, Elsevier Academic Press, Amsterdam Bartsch AJ, Biller A, Homola G (2008) ‘Tractography for surgical targeting’. in: Johansen-Berg H and TE Behrens (Eds.), Imaging brain pathways - Diffusion MRI: from quantitative measurement to in-vivo neuroanatomy. Diffusion MRI for in-vivo neuroanatomy, Elsevier, Chapter 20 of Section 3, Elsevier Academic Press, Amsterdam
147.
go back to reference Ward NS, Brown MM, Thompson AJ et al (2003) Neural correlates of outcome after stroke: a cross-sectional fMRI study. Brain Pt 6:1430–1448 Ward NS, Brown MM, Thompson AJ et al (2003) Neural correlates of outcome after stroke: a cross-sectional fMRI study. Brain Pt 6:1430–1448
148.
go back to reference Ward NS, Brown MM, Thompson AJ et al (2003) Neural correlates of motor recovery after stroke: a longitudinal fMRI study. Brain Pt 11:2476–2496 Ward NS, Brown MM, Thompson AJ et al (2003) Neural correlates of motor recovery after stroke: a longitudinal fMRI study. Brain Pt 11:2476–2496
149.
go back to reference Fernandez B, Cardebat D, Demonet JF et al (2004) Functional MRI follow-up study of language processes in healthy subjects and during recovery in a case of aphasia. Stroke 9:2171–2176 Fernandez B, Cardebat D, Demonet JF et al (2004) Functional MRI follow-up study of language processes in healthy subjects and during recovery in a case of aphasia. Stroke 9:2171–2176
150.
go back to reference Pariente J, Loubinoux I, Carel C et al (2001) Fluoxetine modulates motor performance and cerebral activation of patients recovering from stroke. Ann Neurol 6:718–729 Pariente J, Loubinoux I, Carel C et al (2001) Fluoxetine modulates motor performance and cerebral activation of patients recovering from stroke. Ann Neurol 6:718–729
151.
go back to reference Bjørnehued A and Due-Tønnessen P (2004) Combined fMRI and dynamic perfusion MR in pre-surgical assessment of cerebral arteriovenous malformations. NeuroImage 49 Bjørnehued A and Due-Tønnessen P (2004) Combined fMRI and dynamic perfusion MR in pre-surgical assessment of cerebral arteriovenous malformations. NeuroImage 49
Metadata
Title
Pitfalls in fMRI
Authors
Sven Haller
Andreas J. Bartsch
Publication date
01-11-2009
Publisher
Springer-Verlag
Published in
European Radiology / Issue 11/2009
Print ISSN: 0938-7994
Electronic ISSN: 1432-1084
DOI
https://doi.org/10.1007/s00330-009-1456-9

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