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Published in: Virology Journal 1/2009

Open Access 01-12-2009 | Short report

Phylogenetic analysis of three genes of Penguinpox virus corresponding to Vaccinia virus G8R (VLTF-1), A3L (P4b) and H3L reveals that it is most closely related to Turkeypox virus, Ostrichpox virus and Pigeonpox virus

Authors: Olivia Carulei, Nicola Douglass, Anna-Lise Williamson

Published in: Virology Journal | Issue 1/2009

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Abstract

Phylogenetic analysis of three genes of Penguinpox virus, a novel Avipoxvirus isolated from African penguins, reveals its relationship to other poxviruses. The genes corresponding to Vaccinia virus G8R (VLTF-1), A3L (P4b) and H3L were sequenced and phylogenetic trees (Neighbour-Joining and UPGMA) constructed from MUSCLE nucleotide and amino acid alignments of the equivalent sequences from several different poxviruses. Based on this analysis, PEPV was confirmed to belong to the genus Avipoxvirus, specifically, clade A, subclade A2 and to be most closely related to Turkeypox virus (TKPV), Ostrichpox virus (OSPV)and Pigeonpox virus (PGPV).
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Literature
1.
go back to reference Anderson RJ, Hannan CM, Gilbert SC, Laidlaw SM, Sheu EG, Korten S, Sinden R, Butcher GA, Skinner MA, Hill AVS: Enhanced CD8+T cell immune responses and protection elicited against plasmodium berghei malaria by prime boost immunization regimens using a novel attenuated fowlpox virus. J Immunol 2004, 172: 3094-3100.CrossRefPubMed Anderson RJ, Hannan CM, Gilbert SC, Laidlaw SM, Sheu EG, Korten S, Sinden R, Butcher GA, Skinner MA, Hill AVS: Enhanced CD8+T cell immune responses and protection elicited against plasmodium berghei malaria by prime boost immunization regimens using a novel attenuated fowlpox virus. J Immunol 2004, 172: 3094-3100.CrossRefPubMed
2.
go back to reference Dale CJ, De Rose R, Stratov I, Chea S, Monteflori DC, Thompson S, Ramshaw IA, Coupar BEH, Boyle DB, Law M, Kent SJ: Efficacy of DNA and Fowlpox virus priming/boosting vaccines for Simian/human immunodeficiency virus. Virology 2004, 78: 13819-13828. 10.1128/JVI.78.24.13819-13828.2004CrossRef Dale CJ, De Rose R, Stratov I, Chea S, Monteflori DC, Thompson S, Ramshaw IA, Coupar BEH, Boyle DB, Law M, Kent SJ: Efficacy of DNA and Fowlpox virus priming/boosting vaccines for Simian/human immunodeficiency virus. Virology 2004, 78: 13819-13828. 10.1128/JVI.78.24.13819-13828.2004CrossRef
3.
go back to reference El Garch H, Minke JM, Rehder J, Richard S, Edlund Toulemonde C, Dinic S, Andreoni C, Audonnet JC, Nordgren R, Juillard V: A west Nile virus (WNV) recombinant canarypox virus vaccine elicits WNV-specific neutralizing antibodies and cell-mediated immune responses in the horse. Vet Immunol Immunopath 2008, 123: 230-239. 10.1016/j.vetimm.2008.02.002CrossRef El Garch H, Minke JM, Rehder J, Richard S, Edlund Toulemonde C, Dinic S, Andreoni C, Audonnet JC, Nordgren R, Juillard V: A west Nile virus (WNV) recombinant canarypox virus vaccine elicits WNV-specific neutralizing antibodies and cell-mediated immune responses in the horse. Vet Immunol Immunopath 2008, 123: 230-239. 10.1016/j.vetimm.2008.02.002CrossRef
4.
go back to reference Engelmeyer J, Larsson M, Lee A, Lee M, Cox WI, Steinman RM, Bhardwaj N: Mature dendritic cells infected with canarypox virus elicit strong anti-human immunodeficiency virus CD8+ and CD4+ T-cell responses from chronically infected individuals. J Virol 2001, 75: 2142-2153. 10.1128/JVI.75.5.2142-2153.2001CrossRef Engelmeyer J, Larsson M, Lee A, Lee M, Cox WI, Steinman RM, Bhardwaj N: Mature dendritic cells infected with canarypox virus elicit strong anti-human immunodeficiency virus CD8+ and CD4+ T-cell responses from chronically infected individuals. J Virol 2001, 75: 2142-2153. 10.1128/JVI.75.5.2142-2153.2001CrossRef
5.
go back to reference Jäger E, Karbach J, Gnatic S, Neumann A, Bender A, Valmori D, Ayyoub M, Ritter E, Ritter D, Jäger D, Panicali D, Hoffman E, Pan L, Oettgen H, Old LJ, Knuth A: Recombinant vaccinia/fowlpox NY-ESO-1 vaccines induce both humoral and cellular NY-ESO-1-specific immune responses in cancer patients. Proc Natl Acad Sci 2006, 103: 14453-14458. 10.1073/pnas.0606512103PubMedCentralCrossRefPubMed Jäger E, Karbach J, Gnatic S, Neumann A, Bender A, Valmori D, Ayyoub M, Ritter E, Ritter D, Jäger D, Panicali D, Hoffman E, Pan L, Oettgen H, Old LJ, Knuth A: Recombinant vaccinia/fowlpox NY-ESO-1 vaccines induce both humoral and cellular NY-ESO-1-specific immune responses in cancer patients. Proc Natl Acad Sci 2006, 103: 14453-14458. 10.1073/pnas.0606512103PubMedCentralCrossRefPubMed
6.
go back to reference Karaca K, Swayne DE, Grosenbaugh D, Bublot M, Robles A, Spackman E, Nordgren R: Immunogenicity of fowlpox virus expressing the avian influenza virus H5 gene (TROVAC AIV-H5) in cats. Clin Diagn Lab Immunol 2005, 12: 1340-1342.PubMedCentralPubMed Karaca K, Swayne DE, Grosenbaugh D, Bublot M, Robles A, Spackman E, Nordgren R: Immunogenicity of fowlpox virus expressing the avian influenza virus H5 gene (TROVAC AIV-H5) in cats. Clin Diagn Lab Immunol 2005, 12: 1340-1342.PubMedCentralPubMed
7.
go back to reference Poulet H, Brunet S, Boularand C, Guiot AL, Leroy V, Minke J, Audonnet JC, Desmettre P, Tartaglia J: Efficacy of a canarypox virus-vectored vaccine against feline leukaemia. Vet Rec 2003, 153: 141-145.CrossRefPubMed Poulet H, Brunet S, Boularand C, Guiot AL, Leroy V, Minke J, Audonnet JC, Desmettre P, Tartaglia J: Efficacy of a canarypox virus-vectored vaccine against feline leukaemia. Vet Rec 2003, 153: 141-145.CrossRefPubMed
8.
go back to reference Taylor J, Meignier B, Tartaglia J, Languet B, Guillemin F, Desmettre P, Paoletti E: Biological and immunogenic properties of a canarypox-rabies recombinant, ALVAC-RG (vCP65) in non-avian species. Vaccine 1995, 13: 539-549. 10.1016/0264-410X(94)00028-LCrossRefPubMed Taylor J, Meignier B, Tartaglia J, Languet B, Guillemin F, Desmettre P, Paoletti E: Biological and immunogenic properties of a canarypox-rabies recombinant, ALVAC-RG (vCP65) in non-avian species. Vaccine 1995, 13: 539-549. 10.1016/0264-410X(94)00028-LCrossRefPubMed
9.
10.
go back to reference Tulman ER, Afonso CL, Lu Z, Zsak L, Kutish GF, Rock DL: The genome of canarypox virus. J Virol 2003, 78: 353-366. 10.1128/JVI.78.1.353-366.2004CrossRef Tulman ER, Afonso CL, Lu Z, Zsak L, Kutish GF, Rock DL: The genome of canarypox virus. J Virol 2003, 78: 353-366. 10.1128/JVI.78.1.353-366.2004CrossRef
11.
go back to reference Amano H, Morikawa S, Shimizu H, Shoji I, Kurosawa D, Matsuura Y, Miyamura T, Ueda Y: Identification of the Canarypox virus thymidine kinase gene and insertion of foreign genes. Virology 1999, 256: 280-290. 10.1006/viro.1999.9648CrossRefPubMed Amano H, Morikawa S, Shimizu H, Shoji I, Kurosawa D, Matsuura Y, Miyamura T, Ueda Y: Identification of the Canarypox virus thymidine kinase gene and insertion of foreign genes. Virology 1999, 256: 280-290. 10.1006/viro.1999.9648CrossRefPubMed
12.
go back to reference Kow D: Characterization of Avipoxviruses for use in recombinant vaccines. PhD thesis. University of Cape Town, Department of Clinical and Laboratory Sciences; 1992. Kow D: Characterization of Avipoxviruses for use in recombinant vaccines. PhD thesis. University of Cape Town, Department of Clinical and Laboratory Sciences; 1992.
13.
go back to reference Stannard L, Marais D, Kow D, Dumbell KR: Evidence for incomplete replication of a penguin poxvirus in cells of mammalian origin. J Gen Virol 1998, 79: 1637-1646.CrossRefPubMed Stannard L, Marais D, Kow D, Dumbell KR: Evidence for incomplete replication of a penguin poxvirus in cells of mammalian origin. J Gen Virol 1998, 79: 1637-1646.CrossRefPubMed
14.
go back to reference Jarmin S, Manvell R, Gough RE, Laidlaw SM, Skinner MA: Avipoxvirus phylogenetics: identification of a PCR length polymorphism that discriminates between the two major clades. J Gen Virol 2006, 87: 2191-2201. 10.1099/vir.0.81738-0CrossRefPubMed Jarmin S, Manvell R, Gough RE, Laidlaw SM, Skinner MA: Avipoxvirus phylogenetics: identification of a PCR length polymorphism that discriminates between the two major clades. J Gen Virol 2006, 87: 2191-2201. 10.1099/vir.0.81738-0CrossRefPubMed
15.
16.
go back to reference Saitou N, Nei M: The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4: 406-425.PubMed Saitou N, Nei M: The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4: 406-425.PubMed
17.
go back to reference Gubser C, Hue S, Kellam P, Smith GL: Poxvirus genomes: a phylogenetic analysis. J Gen Virol 2004, 85: 105-117. 10.1099/vir.0.19565-0CrossRefPubMed Gubser C, Hue S, Kellam P, Smith GL: Poxvirus genomes: a phylogenetic analysis. J Gen Virol 2004, 85: 105-117. 10.1099/vir.0.19565-0CrossRefPubMed
18.
go back to reference Binns MM, Boursnell MEG, Tomley FM, Campbell J: Analysis of the Fowlpox virus gene encoding the 4b core polypeptide and demonstration that it possesses efficient promoter sequences. J Virol 1989, 170: 288-291. 10.1016/0042-6822(89)90380-2CrossRef Binns MM, Boursnell MEG, Tomley FM, Campbell J: Analysis of the Fowlpox virus gene encoding the 4b core polypeptide and demonstration that it possesses efficient promoter sequences. J Virol 1989, 170: 288-291. 10.1016/0042-6822(89)90380-2CrossRef
19.
go back to reference Luschow D, Hoffman T, Hafez HM: Differentiation of avian poxvirus strains on the basis of nucleotide sequences of 4b gene fragment. Avian Dis 2004, 48: 453-462. 10.1637/7111CrossRefPubMed Luschow D, Hoffman T, Hafez HM: Differentiation of avian poxvirus strains on the basis of nucleotide sequences of 4b gene fragment. Avian Dis 2004, 48: 453-462. 10.1637/7111CrossRefPubMed
20.
go back to reference Tadese T, Reed WM: Use of restriction fragment length polymorphism, immunoblotting, and polymerase chain reaction in the differentiation of avian poxviruses. J Vet Diagn Invest 2003, 15: 141-150.CrossRefPubMed Tadese T, Reed WM: Use of restriction fragment length polymorphism, immunoblotting, and polymerase chain reaction in the differentiation of avian poxviruses. J Vet Diagn Invest 2003, 15: 141-150.CrossRefPubMed
21.
go back to reference Weli SC, Traavik T, Tryland M, Coucheron DH, Nilssen Ø: Analysis and comparison of the 4b core protein gene of avipoxviruses from wild birds: evidence for interspecies spatial phylogenetic variation. Arch Virol 2004, 149: 2035-2046.PubMed Weli SC, Traavik T, Tryland M, Coucheron DH, Nilssen Ø: Analysis and comparison of the 4b core protein gene of avipoxviruses from wild birds: evidence for interspecies spatial phylogenetic variation. Arch Virol 2004, 149: 2035-2046.PubMed
22.
go back to reference Shivaprasad HL, Kim TJ, Woolcock PR, Tripathy DN: Genetic and antigenic characterization of a poxvirus isolate from ostriches. Avian Dis 2001, 46: 429-436. 10.1637/0005-2086(2002)046[0429:GAACOA]2.0.CO;2CrossRef Shivaprasad HL, Kim TJ, Woolcock PR, Tripathy DN: Genetic and antigenic characterization of a poxvirus isolate from ostriches. Avian Dis 2001, 46: 429-436. 10.1637/0005-2086(2002)046[0429:GAACOA]2.0.CO;2CrossRef
23.
go back to reference Allwright DM, Burger WP, Geyer A, Wessles J: Avian pox in ostriches. J S Afr Vet Assoc 1994, 65: 23-25.PubMed Allwright DM, Burger WP, Geyer A, Wessles J: Avian pox in ostriches. J S Afr Vet Assoc 1994, 65: 23-25.PubMed
24.
go back to reference Perelman B, Gur-lavie A, Samberg Y: Pox in ostriches. Avian Path 1998, 17: 735-739. 10.1080/03079458808436491CrossRef Perelman B, Gur-lavie A, Samberg Y: Pox in ostriches. Avian Path 1998, 17: 735-739. 10.1080/03079458808436491CrossRef
25.
go back to reference Gerlach H: Viruses. In Avian medicine: principles and application. Abridged edition. Edited by: Ritchie BW, Harrison GJ, Harrison LR. Lake Worth, Florida: Wingers Publishing; 1997:871. Gerlach H: Viruses. In Avian medicine: principles and application. Abridged edition. Edited by: Ritchie BW, Harrison GJ, Harrison LR. Lake Worth, Florida: Wingers Publishing; 1997:871.
Metadata
Title
Phylogenetic analysis of three genes of Penguinpox virus corresponding to Vaccinia virus G8R (VLTF-1), A3L (P4b) and H3L reveals that it is most closely related to Turkeypox virus, Ostrichpox virus and Pigeonpox virus
Authors
Olivia Carulei
Nicola Douglass
Anna-Lise Williamson
Publication date
01-12-2009
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2009
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-6-52

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