Skip to main content
Top
Published in: Virology Journal 1/2007

Open Access 01-12-2007 | Research

Oligomerization of the human immunodeficiency virus type 1 (HIV-1) Vpu protein – a genetic, biochemical and biophysical analysis

Authors: Amjad Hussain, Suman R Das, Charu Tanwar, Shahid Jameel

Published in: Virology Journal | Issue 1/2007

Login to get access

Abstract

Background

The human immunodeficiency virus type 1(HIV-1) is a complex retrovirus and the causative agent of acquired immunodeficiency syndrome (AIDS). The HIV-1 Vpu protein is an oligomeric integral membrane protein essential for particle release, viral load and CD4 degradation. In silico models show Vpu to form pentamers with an ion channel activity.

Results

Using Vpu proteins from a primary subtype C and the pNL4-3 subtype B isolates of HIV-1, we show oligomerization of the full-length protein as well as its transmembrane (TM) domain by genetic, biochemical and biophysical methods. We also provide direct evidence of the presence of Vpu pentamers in a stable equilibrium with its monomers in vitro. This was also true for the TM domain of Vpu. Confocal microscopy localized Vpu to the endoplasmic reticulum and Golgi regions of the cell, as well as to post-Golgi vesicles. In fluorescence resonance energy transfer (FRET) experiments in live cells we show that Vpu oligomerizes in what appears to be either the Golgi region or intracellular vesicles, but not in the ER.

Conclusion

We provide here direct evidence that the TM domain, is critical for Vpu oligomerization and the most favourable channel assembly is a pentamer. The Vpu oligomerization appears to be either the Golgi region or intracellular vesicles, but not in the ER.
Appendix
Available only for authorised users
Literature
1.
go back to reference Freed EO, Martin MA: HIVs and their replication. In Field's Virology. Volume 2. 4th edition. Edited by: Knipe DM, Howley PM. Philadelphia, Lippincott Williams and Wilkins; 2001:1971-2041. Freed EO, Martin MA: HIVs and their replication. In Field's Virology. Volume 2. 4th edition. Edited by: Knipe DM, Howley PM. Philadelphia, Lippincott Williams and Wilkins; 2001:1971-2041.
2.
go back to reference Strebel K, Klimkait T, Martin MA: A novel gene of HIV-1, vpu, and its 16-kilodalton product. Science 1988, 241: 1221-1223. 10.1126/science.3261888PubMedCrossRef Strebel K, Klimkait T, Martin MA: A novel gene of HIV-1, vpu, and its 16-kilodalton product. Science 1988, 241: 1221-1223. 10.1126/science.3261888PubMedCrossRef
3.
go back to reference Bour S, Strebel K: The human immunodeficiency virus (HIV) type 2 envelope protein is a functional complement to HIV type 1Vpu that enhances particle release of heterologous retroviruses. J Virol 1996, 70: 8285-8300.PubMedPubMedCentral Bour S, Strebel K: The human immunodeficiency virus (HIV) type 2 envelope protein is a functional complement to HIV type 1Vpu that enhances particle release of heterologous retroviruses. J Virol 1996, 70: 8285-8300.PubMedPubMedCentral
4.
go back to reference Ritter GD, Yamshchikov G, Cohen SJ, Mulligan MJ: Human immunodeficiency virus type 2 glycoprotein enhancement of particle budding: role of the cytoplasmic domain. J Virol 1996, 70: 2669-2673.PubMedPubMedCentral Ritter GD, Yamshchikov G, Cohen SJ, Mulligan MJ: Human immunodeficiency virus type 2 glycoprotein enhancement of particle budding: role of the cytoplasmic domain. J Virol 1996, 70: 2669-2673.PubMedPubMedCentral
5.
go back to reference Cohen EA, Terwilliger EF, Sodroski JG, Haseltine WA: Identification of a protein encoded by the vpu gene of HIV-1. Nature 1988, 334: 532-534. 10.1038/334532a0PubMedCrossRef Cohen EA, Terwilliger EF, Sodroski JG, Haseltine WA: Identification of a protein encoded by the vpu gene of HIV-1. Nature 1988, 334: 532-534. 10.1038/334532a0PubMedCrossRef
6.
go back to reference Schubert U, Henklein P, Boldyreff B, Wingender E, Strebel K, Porstmann T: The human immunodeficiency virus type 1 encoded Vpu protein is phosphorylated by casein kinase-2 (CK-2) at positions Ser52 and Ser56 within a predicted alpha-helix-turn-alpha-helix motif. J Mol Biol 1994, 236: 16-25. 10.1006/jmbi.1994.1114PubMedCrossRef Schubert U, Henklein P, Boldyreff B, Wingender E, Strebel K, Porstmann T: The human immunodeficiency virus type 1 encoded Vpu protein is phosphorylated by casein kinase-2 (CK-2) at positions Ser52 and Ser56 within a predicted alpha-helix-turn-alpha-helix motif. J Mol Biol 1994, 236: 16-25. 10.1006/jmbi.1994.1114PubMedCrossRef
7.
go back to reference Bour S, Strebel K: The HIV-1 Vpu protein: a multifunctional enhancer of viral particle release. Microbes Infection 2003, 5: 1029-1039. 10.1016/S1286-4579(03)00191-6PubMedCrossRef Bour S, Strebel K: The HIV-1 Vpu protein: a multifunctional enhancer of viral particle release. Microbes Infection 2003, 5: 1029-1039. 10.1016/S1286-4579(03)00191-6PubMedCrossRef
8.
go back to reference Bour S, Geleziunas R, Wainberg MA: The human immunodeficiency virus type 1 (HIV-1) CD4 receptor and its central role in the promotion of HIV-1 infection. Microbiol Rev 1995, 59: 63-93.PubMedPubMedCentral Bour S, Geleziunas R, Wainberg MA: The human immunodeficiency virus type 1 (HIV-1) CD4 receptor and its central role in the promotion of HIV-1 infection. Microbiol Rev 1995, 59: 63-93.PubMedPubMedCentral
9.
go back to reference Bour S, Schubert U, Strebel K: The human immunodeficiency virus type 1 Vpu protein specifically binds to the cytoplasmic domain of CD4: implications for the mechanism of degradation. J Virol 1995, 69: 1510-1520.PubMedPubMedCentral Bour S, Schubert U, Strebel K: The human immunodeficiency virus type 1 Vpu protein specifically binds to the cytoplasmic domain of CD4: implications for the mechanism of degradation. J Virol 1995, 69: 1510-1520.PubMedPubMedCentral
10.
go back to reference Margottin F, Bour SP, Durand H, Selig L, Benichou S, Richard V, Thomas D, Strebel K: A novel human WD protein, h-beta TrCp, that interacts with HIV-1 Vpu connects CD4 to the ER degradation pathway through an F-box motif. Mol Cell 1998, 1: 565-574. 10.1016/S1097-2765(00)80056-8PubMedCrossRef Margottin F, Bour SP, Durand H, Selig L, Benichou S, Richard V, Thomas D, Strebel K: A novel human WD protein, h-beta TrCp, that interacts with HIV-1 Vpu connects CD4 to the ER degradation pathway through an F-box motif. Mol Cell 1998, 1: 565-574. 10.1016/S1097-2765(00)80056-8PubMedCrossRef
11.
go back to reference Bai C, Sen P, Hofmann K, Ma L, Goebl M, Harper JW, Elledge SW: SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996, 86: 263-274. 10.1016/S0092-8674(00)80098-7PubMedCrossRef Bai C, Sen P, Hofmann K, Ma L, Goebl M, Harper JW, Elledge SW: SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996, 86: 263-274. 10.1016/S0092-8674(00)80098-7PubMedCrossRef
12.
go back to reference Fujita K, Omura S, Silver J: Rapid degradation of CD4 in cells expressing human immunodeficiency virus type 1 Env and Vpu is blocked by proteasome inhibitors. J Gen Virol 1997, 78: 619-625.PubMedCrossRef Fujita K, Omura S, Silver J: Rapid degradation of CD4 in cells expressing human immunodeficiency virus type 1 Env and Vpu is blocked by proteasome inhibitors. J Gen Virol 1997, 78: 619-625.PubMedCrossRef
13.
go back to reference Schubert U, Anton LC, Bacik I, Cox JH, Bour S, Bennink JR, Orlowski M, Strebel K, Yewdell JW: CD4 glycoprotein degradation induced by human immunodeficiency virus type 1 Vpu protein requires the function of proteasomes and the ubiquitin-conjugating pathway. J Virol 1998, 72: 2280-2288.PubMedPubMedCentral Schubert U, Anton LC, Bacik I, Cox JH, Bour S, Bennink JR, Orlowski M, Strebel K, Yewdell JW: CD4 glycoprotein degradation induced by human immunodeficiency virus type 1 Vpu protein requires the function of proteasomes and the ubiquitin-conjugating pathway. J Virol 1998, 72: 2280-2288.PubMedPubMedCentral
14.
go back to reference Bour S, Perrin C, Akari H, Strebel K: The human immunodeficiency virus type 1 Vpu protein inhibits NF-kappa B activation by interfering with beta TrCP-mediated degradation of Ikappa B. J Biol Chem 2001, 276: 15920-15928. 10.1074/jbc.M010533200PubMedCrossRef Bour S, Perrin C, Akari H, Strebel K: The human immunodeficiency virus type 1 Vpu protein inhibits NF-kappa B activation by interfering with beta TrCP-mediated degradation of Ikappa B. J Biol Chem 2001, 276: 15920-15928. 10.1074/jbc.M010533200PubMedCrossRef
15.
go back to reference Akari H, Bour S, Kao S, Adachi A, Strebel K: The human immunodeficiency virus type 1 accessory protein Vpu induces apoptosis by suppressing the nuclear factor kappa B-dependent expression of antiapoptotic factors. J Exp Med 2001, 194: 1299-1311. 10.1084/jem.194.9.1299PubMedPubMedCentralCrossRef Akari H, Bour S, Kao S, Adachi A, Strebel K: The human immunodeficiency virus type 1 accessory protein Vpu induces apoptosis by suppressing the nuclear factor kappa B-dependent expression of antiapoptotic factors. J Exp Med 2001, 194: 1299-1311. 10.1084/jem.194.9.1299PubMedPubMedCentralCrossRef
16.
go back to reference Klimkait T, Strebel K, Hoggan MD, Martin MA, Orenstein JM: The human immunodeficiency virus type 1-specific protein vpu is required for efficient virus maturation and release. J Virol 1990, 64: 621-629.PubMedPubMedCentral Klimkait T, Strebel K, Hoggan MD, Martin MA, Orenstein JM: The human immunodeficiency virus type 1-specific protein vpu is required for efficient virus maturation and release. J Virol 1990, 64: 621-629.PubMedPubMedCentral
17.
go back to reference Ewart GD, Sutherland T, Gage PW, Cox GB: The Vpu protein of human immunodeficiency virus type 1 forms cation-selective ion channels. J Virol 1996, 70: 7108-7115.PubMedPubMedCentral Ewart GD, Sutherland T, Gage PW, Cox GB: The Vpu protein of human immunodeficiency virus type 1 forms cation-selective ion channels. J Virol 1996, 70: 7108-7115.PubMedPubMedCentral
18.
go back to reference Callahan MA, Handley MA, Lee YH, Talbot KJ, Harper JW, Panganiban AT: Functional interaction of human immunodeficiency virus type 1Vpu and Gag with a novel member of the tetratricopeptide repeat protein family. J Virol 1998, 72: 5189-5197.PubMedPubMedCentral Callahan MA, Handley MA, Lee YH, Talbot KJ, Harper JW, Panganiban AT: Functional interaction of human immunodeficiency virus type 1Vpu and Gag with a novel member of the tetratricopeptide repeat protein family. J Virol 1998, 72: 5189-5197.PubMedPubMedCentral
19.
go back to reference Paul M, Mazumder S, Raja N, Jabbar MA: Mutational analysis of the human immunodeficiency virus type 1 Vpu transmembrane domain that promotes the enhanced release of virus-like particles from the plasma membrane of mammalian cells. J Virol 1998, 72: 1270-1279.PubMedPubMedCentral Paul M, Mazumder S, Raja N, Jabbar MA: Mutational analysis of the human immunodeficiency virus type 1 Vpu transmembrane domain that promotes the enhanced release of virus-like particles from the plasma membrane of mammalian cells. J Virol 1998, 72: 1270-1279.PubMedPubMedCentral
20.
go back to reference Schubert U, Bour S, Ferrer-Montiel AV, Montal M, Maldarelli F, Strebel K: The two biological activities of human immunodeficiency virus type 1 Vpu protein involve two separable structural domains. J Virol 1996, 70: 809-819.PubMedPubMedCentral Schubert U, Bour S, Ferrer-Montiel AV, Montal M, Maldarelli F, Strebel K: The two biological activities of human immunodeficiency virus type 1 Vpu protein involve two separable structural domains. J Virol 1996, 70: 809-819.PubMedPubMedCentral
21.
go back to reference Hout DR, Gomez ML, Pacyniak E, Gomez LM, Inbody SH, Mulcahy ER, Culley N, Pinson DM, Powers MF, Wong SW, Stephens EB: Scrambling of the amino acids within the transmembrane domain of Vpu results in a simian-human immunodeficiency virus (SHIVTM) that is less pathogenic for pig-tailed macaques. Virology 2005, 339: 56-69. 10.1016/j.virol.2005.04.038PubMedCrossRef Hout DR, Gomez ML, Pacyniak E, Gomez LM, Inbody SH, Mulcahy ER, Culley N, Pinson DM, Powers MF, Wong SW, Stephens EB: Scrambling of the amino acids within the transmembrane domain of Vpu results in a simian-human immunodeficiency virus (SHIVTM) that is less pathogenic for pig-tailed macaques. Virology 2005, 339: 56-69. 10.1016/j.virol.2005.04.038PubMedCrossRef
22.
go back to reference Maldarelli F, Chen MY, Willey RL, Strebel K: Human immunodeficiency virus type 1 Vpu protein is an oligomeric type I integral membrane protein. J Virol 1993, 67: 5056-5061.PubMedPubMedCentral Maldarelli F, Chen MY, Willey RL, Strebel K: Human immunodeficiency virus type 1 Vpu protein is an oligomeric type I integral membrane protein. J Virol 1993, 67: 5056-5061.PubMedPubMedCentral
23.
go back to reference Moore PB, Zhong Q, Husslein T, Klein ML: Simulation of the HIV-1 Vpu transmembrane domain as a pentameric bundle. FEBS Lett 1998, 431: 143-148. 10.1016/S0014-5793(98)00714-5PubMedCrossRef Moore PB, Zhong Q, Husslein T, Klein ML: Simulation of the HIV-1 Vpu transmembrane domain as a pentameric bundle. FEBS Lett 1998, 431: 143-148. 10.1016/S0014-5793(98)00714-5PubMedCrossRef
24.
25.
go back to reference Siegel RM, Chan FK-M, Zacharias DA, Swofford R, Holmes KL, Tsien RY, Leonardo MJ: Measurement of molecular interactions in living cells by fluorescence resonance energy transfer between variants of the green fluorescent protein. Sci STKE 2000, 38: pl1. [DOI: 10.1126/stke.2000.38.pl1]. Siegel RM, Chan FK-M, Zacharias DA, Swofford R, Holmes KL, Tsien RY, Leonardo MJ: Measurement of molecular interactions in living cells by fluorescence resonance energy transfer between variants of the green fluorescent protein. Sci STKE 2000, 38: pl1. [DOI: 10.1126/stke.2000.38.pl1].
26.
go back to reference Schubert U, Ferrer-Montiel AV, Oblatt-Montal M, Henklein P, Strebel K, Montal M: Identification of an ion channel activity of the Vpu transmembrane domain and its involvement in the regulation of virus release from HIV-1-infected cells. FEBS Lett 1996, 398: 12-18. 10.1016/S0014-5793(96)01146-5PubMedCrossRef Schubert U, Ferrer-Montiel AV, Oblatt-Montal M, Henklein P, Strebel K, Montal M: Identification of an ion channel activity of the Vpu transmembrane domain and its involvement in the regulation of virus release from HIV-1-infected cells. FEBS Lett 1996, 398: 12-18. 10.1016/S0014-5793(96)01146-5PubMedCrossRef
27.
go back to reference Marassi FM, Ma C, Gratowski H, Strauss SK, Strebel K, Oblatt-Montal M, Montal M, Opella SJ: Correlation of the structural and functional domains in the mebrane protein Vpu from HIV-1. Proc Natl Acad Sci USA 1999, 86: 14336-14341. 10.1073/pnas.96.25.14336CrossRef Marassi FM, Ma C, Gratowski H, Strauss SK, Strebel K, Oblatt-Montal M, Montal M, Opella SJ: Correlation of the structural and functional domains in the mebrane protein Vpu from HIV-1. Proc Natl Acad Sci USA 1999, 86: 14336-14341. 10.1073/pnas.96.25.14336CrossRef
28.
go back to reference Lopez CF, Montal M, Blasie JK, Klein ML, Moore PB: Molecular dynamics investigation of membrane-bound bundles of the channel-forming transmembrane domain of viral protein U from the human immunodeficiency virus HIV-1. Biophys J 2002, 83: 1259-1267.PubMedPubMedCentralCrossRef Lopez CF, Montal M, Blasie JK, Klein ML, Moore PB: Molecular dynamics investigation of membrane-bound bundles of the channel-forming transmembrane domain of viral protein U from the human immunodeficiency virus HIV-1. Biophys J 2002, 83: 1259-1267.PubMedPubMedCentralCrossRef
29.
go back to reference Becker CFW, Oblatt-Montal M, Kochendoerfer GG, Montal M: Chemical synthesis and single channel properties of tetrameric and pentameric TASPs (template-assembled synthetic proteins) derived from the transmembrane domain of HIV virus protein u (Vpu). J Biol Chem 2004, 279: 17483-17489. 10.1074/jbc.M313212200PubMedCrossRef Becker CFW, Oblatt-Montal M, Kochendoerfer GG, Montal M: Chemical synthesis and single channel properties of tetrameric and pentameric TASPs (template-assembled synthetic proteins) derived from the transmembrane domain of HIV virus protein u (Vpu). J Biol Chem 2004, 279: 17483-17489. 10.1074/jbc.M313212200PubMedCrossRef
30.
go back to reference Raja NU, Jabbar MA: The human immunodeficiency virus type 1 Vpu protein tethered to the CD4 extracellular domain is localized to the plasma membrane and is biologically active in the secretory pathway of mammalian cells: implications for the mechanisms of Vpu function. Virol 1996, 220: 141-151. 10.1006/viro.1996.0294CrossRef Raja NU, Jabbar MA: The human immunodeficiency virus type 1 Vpu protein tethered to the CD4 extracellular domain is localized to the plasma membrane and is biologically active in the secretory pathway of mammalian cells: implications for the mechanisms of Vpu function. Virol 1996, 220: 141-151. 10.1006/viro.1996.0294CrossRef
31.
go back to reference Pacyniak E, Gomez ML, Gomez LM, Mulcahy ER, Jackson M, Hout DR, Wisdom BR, Stephens EB: Identification of a region within the cytoplasmic domain of the subtype B Vpu protein of human immunodeficiency virus type 1 (HIV-1) that is responsible for retention in the Golgi complex and its absence in the Vpu protein from a subtype C HIV-1. AIDS Res Hum Ret 2005, 21: 379-394. 10.1089/aid.2005.21.379CrossRef Pacyniak E, Gomez ML, Gomez LM, Mulcahy ER, Jackson M, Hout DR, Wisdom BR, Stephens EB: Identification of a region within the cytoplasmic domain of the subtype B Vpu protein of human immunodeficiency virus type 1 (HIV-1) that is responsible for retention in the Golgi complex and its absence in the Vpu protein from a subtype C HIV-1. AIDS Res Hum Ret 2005, 21: 379-394. 10.1089/aid.2005.21.379CrossRef
32.
33.
go back to reference Rizzuto R, Duchen MR, Pozzan T: Flirting in little space: the ER/mitochontria Ca 2+ liaison. Sci STKE 2004. re1. Rizzuto R, Duchen MR, Pozzan T: Flirting in little space: the ER/mitochontria Ca 2+ liaison. Sci STKE 2004. re1.
34.
go back to reference Peterlin BM, Trono D: Hide, shield and strike back: how HIV-infected cells avoid immune eradication. Nat Rev Immunol 2003, 3: 97-107. 10.1038/nri998PubMedCrossRef Peterlin BM, Trono D: Hide, shield and strike back: how HIV-infected cells avoid immune eradication. Nat Rev Immunol 2003, 3: 97-107. 10.1038/nri998PubMedCrossRef
35.
go back to reference Kar-Roy A, Korkaya H, Oberoi R, Lal SK, Jameel S: The hepatitis E virus open reading frame 3 protein activates ERK through binding and inhibition of the MAPK phosphatase. J Biol Chem 2004, 279: 28345-28357. 10.1074/jbc.M400457200PubMedPubMedCentralCrossRef Kar-Roy A, Korkaya H, Oberoi R, Lal SK, Jameel S: The hepatitis E virus open reading frame 3 protein activates ERK through binding and inhibition of the MAPK phosphatase. J Biol Chem 2004, 279: 28345-28357. 10.1074/jbc.M400457200PubMedPubMedCentralCrossRef
36.
go back to reference Tyagi S, Surjit M, Kar-Roy A, Jameel S, Lal SK: The ORF3 protein of hepatitis E virus interacts with liver-specific α 1 -microglobulin and its precursor, α 1 -microglobulin.bikunin precursor (AMBP) and expedites their export from the hepatocyte. J Biol Chem 2004, 279: 29308-29319. 10.1074/jbc.M402017200PubMedCrossRef Tyagi S, Surjit M, Kar-Roy A, Jameel S, Lal SK: The ORF3 protein of hepatitis E virus interacts with liver-specific α 1 -microglobulin and its precursor, α 1 -microglobulin.bikunin precursor (AMBP) and expedites their export from the hepatocyte. J Biol Chem 2004, 279: 29308-29319. 10.1074/jbc.M402017200PubMedCrossRef
37.
go back to reference Harper JW, Adami GR, Wei N, Keyomarsi K, Elledge SJ: The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases. Cell 1993, 75: 805-816. 10.1016/0092-8674(93)90499-GPubMedCrossRef Harper JW, Adami GR, Wei N, Keyomarsi K, Elledge SJ: The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases. Cell 1993, 75: 805-816. 10.1016/0092-8674(93)90499-GPubMedCrossRef
38.
go back to reference Bai C, Elledge SJ: Gene identification using the yeast two-hybrid system. Methods Enzymol 1996, 273: 331-347.PubMedCrossRef Bai C, Elledge SJ: Gene identification using the yeast two-hybrid system. Methods Enzymol 1996, 273: 331-347.PubMedCrossRef
Metadata
Title
Oligomerization of the human immunodeficiency virus type 1 (HIV-1) Vpu protein – a genetic, biochemical and biophysical analysis
Authors
Amjad Hussain
Suman R Das
Charu Tanwar
Shahid Jameel
Publication date
01-12-2007
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2007
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-4-81

Other articles of this Issue 1/2007

Virology Journal 1/2007 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine