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Published in: Antimicrobial Resistance & Infection Control 1/2015

Open Access 01-12-2015 | Research

Multidrug resistant Enterobacteriaceae and extended spectrum β-lactamase producing Escherichia coli: a cross-sectional study in National Kidney Center, Nepal

Authors: Kamlesh Kumar Yadav, Nabaraj Adhikari, Rama Khadka, Anil Dev Pant, Bibha Shah

Published in: Antimicrobial Resistance & Infection Control | Issue 1/2015

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Abstract

Background

Emergence of antibacterial resistance and production of Extended spectrum β-lactamases (ESBLs) are responsible for the frequently observed empirical therapy failures. Most countries have experienced rapid dissemination of ESBLs producing Enterobacteriaceae isolates, particularly E. coli and Klebsiella pneumoniae. ESBLs are clinically significant and when detected, indicate the need for the use of appropriate antibacterial agents. But antibacterial choice is often complicated by multi-resistance.

Methods

This study was carried from June to November 2014 to study the multidrug resistant (MDR) Enterobacteriaceae and ESBL producing E. coli among urine isolates in hospital setting. Isolates from urine samples were primarily screened for possible ESBL production followed by phenotypic confirmation. Antibiotic susceptibility testing (AST) was done by Kirby Bauer disk diffusion method following Clinical and Laboratory Standard Institute (CLSI) guidelines.

Results

Out of 450 urine samples processed, 141 significant growths were obtained including 95 Enterobacteriaceae isolates with 67 E. coli. Among Enterobacteriaceae, 92 (96.84 %) were recorded as MDR and 18 (26.87 %) E. coli were confirmed as ESBLs producers.

Conclusions

Using the phenotypic confirmatory test forwarded by the CLSI, relatively significant E. coli isolates tested were ESBL producers. Also high numbers of MDR organisms were isolated among Enterobacteriaceae. Isolates showed significant resistance to the commonly prescribed drugs. These findings suggest for further study in this field including the consequences of colonization with MDR and ESBL-producing bacteria both in the community and in the hospital setting.
Literature
1.
go back to reference Kattel HP, Acharya J, Mishra SK, Rijal BP, Pokhrel BM. Bacteriology of urinary tract infection among patients attending Tribhuvan University Teaching Hospital, Kathmandu, Nepal. J Nepal Assoc Med Lab Sci. 2008;9:25–9. Kattel HP, Acharya J, Mishra SK, Rijal BP, Pokhrel BM. Bacteriology of urinary tract infection among patients attending Tribhuvan University Teaching Hospital, Kathmandu, Nepal. J Nepal Assoc Med Lab Sci. 2008;9:25–9.
2.
go back to reference Nachimuthu R, Sumathi CS, Balasubramanian V, Palaniappan KR, Kannan VR. Urinary tract infection and antimicrobial susceptibility pattern of extended spectrum of beta lactamase producing clinical isolates. Adv Biol Res. 2008;2:78–82. Nachimuthu R, Sumathi CS, Balasubramanian V, Palaniappan KR, Kannan VR. Urinary tract infection and antimicrobial susceptibility pattern of extended spectrum of beta lactamase producing clinical isolates. Adv Biol Res. 2008;2:78–82.
3.
go back to reference Thirapanmethee K. Extended spectrum β-lactamases: critical tools of bacterial resistance. Mahidol Univ J Pharm Sci. 2012;39:1–8. Thirapanmethee K. Extended spectrum β-lactamases: critical tools of bacterial resistance. Mahidol Univ J Pharm Sci. 2012;39:1–8.
4.
go back to reference Bradford PA. Extended-Spectrum β-Lactamases in the 21st Century: characterization, epidemiology, and detection of this important resistance threat. Clin Microbiol Rev. 2001;14:933–51.PubMedCentralCrossRefPubMed Bradford PA. Extended-Spectrum β-Lactamases in the 21st Century: characterization, epidemiology, and detection of this important resistance threat. Clin Microbiol Rev. 2001;14:933–51.PubMedCentralCrossRefPubMed
5.
go back to reference Mukherjee M, Basu S, Mukherjee SK, Majumder M. Multidrug-resistance and extended spectrum beta-lactamase production in uropathogenic E. coli which were isolated from hospitalized patients in Kolkata, India. J Clin Diagn Res. 2013;7:449–53.PubMedCentralPubMed Mukherjee M, Basu S, Mukherjee SK, Majumder M. Multidrug-resistance and extended spectrum beta-lactamase production in uropathogenic E. coli which were isolated from hospitalized patients in Kolkata, India. J Clin Diagn Res. 2013;7:449–53.PubMedCentralPubMed
6.
go back to reference Chander A, Shrestha CD. Prevalence of extended spectrum beta lactamase producing Escherichia coli and Klebsiella pneumoniae urinary isolates in a tertiary care hospital in Kathmandu, Nepal. BMC Res Notes. 2013;6:487–92.PubMedCentralCrossRefPubMed Chander A, Shrestha CD. Prevalence of extended spectrum beta lactamase producing Escherichia coli and Klebsiella pneumoniae urinary isolates in a tertiary care hospital in Kathmandu, Nepal. BMC Res Notes. 2013;6:487–92.PubMedCentralCrossRefPubMed
7.
go back to reference Chaudhary U, Aggarwal R. Extended spectrum β-lactamases (ESBL) - An emerging threat to clinical therapeutics. Indian J Med Microbiol. 2004;22:75–80.PubMed Chaudhary U, Aggarwal R. Extended spectrum β-lactamases (ESBL) - An emerging threat to clinical therapeutics. Indian J Med Microbiol. 2004;22:75–80.PubMed
8.
go back to reference Sahuquillo-Arce JM, Perpinan H, Armero C, Lopez-Quilez A, Selva M, Gonzalez F. Bayesian Approach to Urinary ESBL-Producing Escherichia coli. J Pharmacovigilance. 2014;2:133. Sahuquillo-Arce JM, Perpinan H, Armero C, Lopez-Quilez A, Selva M, Gonzalez F. Bayesian Approach to Urinary ESBL-Producing Escherichia coli. J Pharmacovigilance. 2014;2:133.
9.
go back to reference Cohen Stuart J, Dierikx C, Al Naiemi N, Karczmarek A, Van Hoek AHAM, Vos P, et al. Rapid detection of TEM, SHV and CTX-M extended-spectrum β-lactamases in Enterobacteriaceae using ligation-mediated amplification with microarray analysis. J Antimicrob Chemother. 2010;65:1377–81.CrossRefPubMed Cohen Stuart J, Dierikx C, Al Naiemi N, Karczmarek A, Van Hoek AHAM, Vos P, et al. Rapid detection of TEM, SHV and CTX-M extended-spectrum β-lactamases in Enterobacteriaceae using ligation-mediated amplification with microarray analysis. J Antimicrob Chemother. 2010;65:1377–81.CrossRefPubMed
10.
go back to reference Tambekar DH, Dhanorkar DV, Gulhane SR, Khandelwal VK, Dudhane MN. Antibacterial susceptibility of some urinary tract pathogens to commonly used antibiotics. Afr J Biotechnol. 2006;5:1562–65. Tambekar DH, Dhanorkar DV, Gulhane SR, Khandelwal VK, Dudhane MN. Antibacterial susceptibility of some urinary tract pathogens to commonly used antibiotics. Afr J Biotechnol. 2006;5:1562–65.
11.
go back to reference Mena A, Plasencia V, García L, Hidalgo O, Ayestarán JI, Alberti S, et al. Characterization of a Large Outbreak by CTX-M-1-Producing Klebsiella pneumoniae and Mechanisms Leading to In Vivo Carbapenem Resistance Development. J Clin Microbiol. 2006;44:2831.PubMedCentralCrossRefPubMed Mena A, Plasencia V, García L, Hidalgo O, Ayestarán JI, Alberti S, et al. Characterization of a Large Outbreak by CTX-M-1-Producing Klebsiella pneumoniae and Mechanisms Leading to In Vivo Carbapenem Resistance Development. J Clin Microbiol. 2006;44:2831.PubMedCentralCrossRefPubMed
12.
go back to reference Clinical and Laboratory Standards Institute (CLSI). Performance Standards for Antimicrobial Susceptibility Testing. USA: CLSI: M100-S25; 2015. Wayne, PA. Clinical and Laboratory Standards Institute (CLSI). Performance Standards for Antimicrobial Susceptibility Testing. USA: CLSI: M100-S25; 2015. Wayne, PA.
13.
go back to reference Maina D, Makau P, Nyerere A, Revathi G. Antimicrobial resistance patterns in extended-spectrum β-lactamase producing Escherichia coli and Klebsiella pneumoniae isolates in a private tertiary hospital, Kenya. Microb Discov. 2013;1:5.CrossRef Maina D, Makau P, Nyerere A, Revathi G. Antimicrobial resistance patterns in extended-spectrum β-lactamase producing Escherichia coli and Klebsiella pneumoniae isolates in a private tertiary hospital, Kenya. Microb Discov. 2013;1:5.CrossRef
14.
go back to reference Sharma AR, Bhatta DR, Shrestha J, Banjara MR. Antimicrobial Susceptibility Pattern of Escherichia coli isolated from Urinary Tract Infected Patients Attending Bir Hospital. Nepal J Sci Technol. 2013;14:177–84.CrossRef Sharma AR, Bhatta DR, Shrestha J, Banjara MR. Antimicrobial Susceptibility Pattern of Escherichia coli isolated from Urinary Tract Infected Patients Attending Bir Hospital. Nepal J Sci Technol. 2013;14:177–84.CrossRef
15.
go back to reference Moyo SJ, Aboud S, Kasubi M, Lyamuya EF, Maselle SY. Antimicrobial resistance among producers and non-producers of extended spectrum beta-lactamases in urinary isolates at a tertiary Hospital in Tanzania. BMC Res Notes. 2010;3:348–52.PubMedCentralCrossRefPubMed Moyo SJ, Aboud S, Kasubi M, Lyamuya EF, Maselle SY. Antimicrobial resistance among producers and non-producers of extended spectrum beta-lactamases in urinary isolates at a tertiary Hospital in Tanzania. BMC Res Notes. 2010;3:348–52.PubMedCentralCrossRefPubMed
17.
go back to reference Dhakal S, Manandhar S, Shrestha B, Dhakal R, Pudasaini M. Extended spectrum β-lactamase producing multidrug resistant urinary isolates from children visiting Kathmandu Model Hospital. Nepal Med Coll J. 2012;14:136–41.PubMed Dhakal S, Manandhar S, Shrestha B, Dhakal R, Pudasaini M. Extended spectrum β-lactamase producing multidrug resistant urinary isolates from children visiting Kathmandu Model Hospital. Nepal Med Coll J. 2012;14:136–41.PubMed
18.
go back to reference Ahmed OB, Omar AO, Asghar AH, Elhassan MM. Increasing prevalence of ESBL-producing Enterobacteriaceae in Sudan community patients with UTIs. Egypt Acad J Biolog Sci. 2013;5:17–24. Ahmed OB, Omar AO, Asghar AH, Elhassan MM. Increasing prevalence of ESBL-producing Enterobacteriaceae in Sudan community patients with UTIs. Egypt Acad J Biolog Sci. 2013;5:17–24.
19.
go back to reference Acharya A, Gautam R, Subedee L. Uropathogens and their antimicrobial susceptibility pattern in Bharatpur, Nepal. Nepal Med Coll J. 2011;13:30–3.PubMed Acharya A, Gautam R, Subedee L. Uropathogens and their antimicrobial susceptibility pattern in Bharatpur, Nepal. Nepal Med Coll J. 2011;13:30–3.PubMed
20.
go back to reference Khawcharoenporn T, Vasoo S, Singh K. Urinary Tract Infections due to Multidrug-Resistant Enterobacteriaceae: Prevalence and Risk Factors in a Chicago Emergency Department. Hindawi Publishing Corporation Emergency Medicine International. 2013; doi:10.1155/2013/258517 Khawcharoenporn T, Vasoo S, Singh K. Urinary Tract Infections due to Multidrug-Resistant Enterobacteriaceae: Prevalence and Risk Factors in a Chicago Emergency Department. Hindawi Publishing Corporation Emergency Medicine International. 2013; doi:10.1155/2013/258517
21.
go back to reference Thakur S, Pokhrel N, Sharma N. Prevalence of Multidrug Resistant Enterobacteriaceae and Extended Spectrum β Lactamase Producing Escherichia Coli in Urinary Tract Infection. RJPBCS. 2013;4:1615–24. Thakur S, Pokhrel N, Sharma N. Prevalence of Multidrug Resistant Enterobacteriaceae and Extended Spectrum β Lactamase Producing Escherichia Coli in Urinary Tract Infection. RJPBCS. 2013;4:1615–24.
22.
go back to reference Sorum H, Sunde M. Resistance to antibiotics in the normal flora of animals. Vet Res. 2001;32:227–41.CrossRefPubMed Sorum H, Sunde M. Resistance to antibiotics in the normal flora of animals. Vet Res. 2001;32:227–41.CrossRefPubMed
23.
go back to reference Kandeel A. Prevalence and risk factors of extended-spectrum β-lactamses producing Enterobacteriaceae in a general hospital in Saudi Arabia. JMID. 2014;4:50–4.CrossRef Kandeel A. Prevalence and risk factors of extended-spectrum β-lactamses producing Enterobacteriaceae in a general hospital in Saudi Arabia. JMID. 2014;4:50–4.CrossRef
24.
go back to reference Roshan M, Ikram A, Mirza IA, Malik N, Abbasi SA, Alizai SA. Susceptibility Pattern of Extended Spectrum ß-Lactamase Producing Isolates in Various Clinical Specimens. J Coll Physicians Surg Pak. 2011;21:342–6.PubMed Roshan M, Ikram A, Mirza IA, Malik N, Abbasi SA, Alizai SA. Susceptibility Pattern of Extended Spectrum ß-Lactamase Producing Isolates in Various Clinical Specimens. J Coll Physicians Surg Pak. 2011;21:342–6.PubMed
25.
go back to reference Shah AA, Hasan F, Ahmed S, Hameed A. Extended-spectrum beta-lactamases in Enterobacteriaceae: related to age and gender. New Microbiol. 2002;25:363–6.PubMed Shah AA, Hasan F, Ahmed S, Hameed A. Extended-spectrum beta-lactamases in Enterobacteriaceae: related to age and gender. New Microbiol. 2002;25:363–6.PubMed
26.
go back to reference Rajan S, Prabavathy J. Antibiotic Sensitivity and Phenotypic Detection of ESBL producing E. coli Strains Causing Urinary Tract Infection In a Community Hospital, Chennai, Tamil Nadu, India. WebmedCentral. Pharm Sci. 2012;3, WMC003840. Rajan S, Prabavathy J. Antibiotic Sensitivity and Phenotypic Detection of ESBL producing E. coli Strains Causing Urinary Tract Infection In a Community Hospital, Chennai, Tamil Nadu, India. WebmedCentral. Pharm Sci. 2012;3, WMC003840.
27.
go back to reference Mumtaz S, Ahmad M, Aftab I, Akhtar N, ul Hassan M, Hamid A. Extended spectrum β-lactamases in enteric gram-negative bacilli: related to age and gender. JAMC. 2007;19:107–11.PubMed Mumtaz S, Ahmad M, Aftab I, Akhtar N, ul Hassan M, Hamid A. Extended spectrum β-lactamases in enteric gram-negative bacilli: related to age and gender. JAMC. 2007;19:107–11.PubMed
28.
go back to reference Khanfar HS, Bindayna KM, Senok AC, Botta GA. Extended spectrum beta-lactamases (ESBL) in Escherichia coli and Klebsiella pneumoniae: trends in the hospital and community settings. J Infect Dev Ctries. 2009;3:295–9.PubMed Khanfar HS, Bindayna KM, Senok AC, Botta GA. Extended spectrum beta-lactamases (ESBL) in Escherichia coli and Klebsiella pneumoniae: trends in the hospital and community settings. J Infect Dev Ctries. 2009;3:295–9.PubMed
29.
go back to reference Islam MS, Yusuf MA, Islam MB, Jahan WA. Frequency of ESBL in Surgical Site Infection at a Tertiary Care Hospital. J Curr Adv Med Res. 2014;1:25–9. Islam MS, Yusuf MA, Islam MB, Jahan WA. Frequency of ESBL in Surgical Site Infection at a Tertiary Care Hospital. J Curr Adv Med Res. 2014;1:25–9.
30.
go back to reference Sompolinsky D, Nitzan Y, Tetry S, Wolk M, Vulikh I, Kerrn MB, et al. Integron-mediated ESBL resistance in rare serotypes of Escherichia coli causing infections in an elderly population of Israel. J Antimicrob Chemother. 2005;55:119–22.CrossRefPubMed Sompolinsky D, Nitzan Y, Tetry S, Wolk M, Vulikh I, Kerrn MB, et al. Integron-mediated ESBL resistance in rare serotypes of Escherichia coli causing infections in an elderly population of Israel. J Antimicrob Chemother. 2005;55:119–22.CrossRefPubMed
31.
go back to reference Wani KA, Thakur MA, Fayaz AS, Fomdia B, Gulnaz B, Maroof P. Extended Spectrum B-Lactamase Mediated Resistance in Escherichia Coli in a Tertiary Care Hospital. Int J Health Sci (Qassim). 2009;3:155–63. Wani KA, Thakur MA, Fayaz AS, Fomdia B, Gulnaz B, Maroof P. Extended Spectrum B-Lactamase Mediated Resistance in Escherichia Coli in a Tertiary Care Hospital. Int J Health Sci (Qassim). 2009;3:155–63.
32.
go back to reference Gonzalez US, Spencer JP. Aminoglycosides: a practical review. Am Fam Physician. 1998;58:1811–20.PubMed Gonzalez US, Spencer JP. Aminoglycosides: a practical review. Am Fam Physician. 1998;58:1811–20.PubMed
34.
go back to reference Kader AA, Angamuthu K. Extended-spectrum beta-lactamases in urinary isolates of Escherichia coli, Klebsiella pneumoniae and other gram-negative bacteria in a hospital in Eastern Province, Saudi Arabia. Saudi Med J. 2005;26:956–9.PubMed Kader AA, Angamuthu K. Extended-spectrum beta-lactamases in urinary isolates of Escherichia coli, Klebsiella pneumoniae and other gram-negative bacteria in a hospital in Eastern Province, Saudi Arabia. Saudi Med J. 2005;26:956–9.PubMed
35.
go back to reference Mekki AH, Hassan AN, Elsayed DEM. Extended spectrum beta lactamase among multi drug resistant E. coli and Klebsiella species causing urinary tract infections in Khartoum. J Bact Res. 2010;2:18–21. Mekki AH, Hassan AN, Elsayed DEM. Extended spectrum beta lactamase among multi drug resistant E. coli and Klebsiella species causing urinary tract infections in Khartoum. J Bact Res. 2010;2:18–21.
36.
go back to reference Smet A, Martel A, Persoons D, Dewulf J, Heyndrickx M, Herman L, et al. Broad-spectrum β-lactamases among Enterobacteriaceae of animal origin: molecular aspects, mobility and impact on public health. FEMS Microbiol Rev. 2010;34:295–316.CrossRefPubMed Smet A, Martel A, Persoons D, Dewulf J, Heyndrickx M, Herman L, et al. Broad-spectrum β-lactamases among Enterobacteriaceae of animal origin: molecular aspects, mobility and impact on public health. FEMS Microbiol Rev. 2010;34:295–316.CrossRefPubMed
37.
38.
go back to reference Paterson DL, Ko WC, Gottberg AV, Casellas JM, Mulazimoglu L, Klugman KP, et al. Outcome of cephalosporin treatment for serious infections due to apparently susceptible organisms producing extended spectrum β-lactamases: implications for the clinical microbiology laboratory. J Clin Microbiol. 2001;39:2206–12.PubMedCentralCrossRefPubMed Paterson DL, Ko WC, Gottberg AV, Casellas JM, Mulazimoglu L, Klugman KP, et al. Outcome of cephalosporin treatment for serious infections due to apparently susceptible organisms producing extended spectrum β-lactamases: implications for the clinical microbiology laboratory. J Clin Microbiol. 2001;39:2206–12.PubMedCentralCrossRefPubMed
39.
go back to reference Shah AA, Hasan F, Ahmed S, Hameed A. Prevalence of extended spectrum β-lactamases in nosocomial and outpatients (ambulatory). Pak J Med Sci. 2003;19:187–91. Shah AA, Hasan F, Ahmed S, Hameed A. Prevalence of extended spectrum β-lactamases in nosocomial and outpatients (ambulatory). Pak J Med Sci. 2003;19:187–91.
Metadata
Title
Multidrug resistant Enterobacteriaceae and extended spectrum β-lactamase producing Escherichia coli: a cross-sectional study in National Kidney Center, Nepal
Authors
Kamlesh Kumar Yadav
Nabaraj Adhikari
Rama Khadka
Anil Dev Pant
Bibha Shah
Publication date
01-12-2015
Publisher
BioMed Central
Published in
Antimicrobial Resistance & Infection Control / Issue 1/2015
Electronic ISSN: 2047-2994
DOI
https://doi.org/10.1186/s13756-015-0085-0

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