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Published in: Cancer Imaging 1/2019

Open Access 01-12-2019 | Magnetic Resonance Imaging | Research article

Independent validation of machine learning in diagnosing breast Cancer on magnetic resonance imaging within a single institution

Authors: Yu Ji, Hui Li, Alexandra V. Edwards, John Papaioannou, Wenjuan Ma, Peifang Liu, Maryellen L. Giger

Published in: Cancer Imaging | Issue 1/2019

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Abstract

Background

As artificial intelligence methods for the diagnosis of disease advance, we aimed to evaluate machine learning in the predictive task of distinguishing between malignant and benign breast lesions on an independent clinical magnetic resonance imaging (MRI) dataset within a single institution for subsequent use as a computer aid for radiologists.

Methods

Computer analysis was conducted on consecutive dynamic contrast-enhanced MRI (DCE-MRI) studies from 1483 breast cancer and 496 benign patients who underwent MRI examinations between February 2015 and October 2017; with the age ranges of the cancer and benign patients being 19 to 77 and 16 to 76 years old, respectively. Cases were separated into a training dataset (years 2015 & 2016; 1444 cases) and an independent testing dataset (year 2017; 535 cases) based solely on MRI examination date. After radiologist indication of the lesion, the computer automatically segmented and extracted radiomic features, which were subsequently merged with a support-vector machine (SVM) to yield a lesion signature. Area under the receiving operating characteristic (ROC) curve (AUC) with 95% confidence intervals (CI) served as the primary figure of merit in the statistical evaluation for this clinical classification task.

Results

In the task of distinguishing malignant and benign breast lesions DCE-MRI, the trained predictive model yielded an AUC value of 0.89 (95% CI: 0.858, 0.922) on the independent image set. AUC values of 0.88 (95% CI: 0.845, 0.926) and 0.90 (95% CI: 0.837, 0.940) were obtained for mass lesions only and non-mass lesions only, respectively. Compared with actual clinical management decisions, the predictive model achieved 99.5% sensitivity with 9.6% fewer recommended biopsies.

Conclusion

On an independent, consecutive clinical dataset within a single institution, a trained machine learning system yielded promising performance in distinguishing between malignant and benign breast lesions.
Literature
1.
go back to reference Siegel RL, Miller KD, Jemal A. Cancer statistics, 2018. CA Cancer J Clin. 2018;68(1):7–30.CrossRef Siegel RL, Miller KD, Jemal A. Cancer statistics, 2018. CA Cancer J Clin. 2018;68(1):7–30.CrossRef
2.
go back to reference Chen W, Zheng R, Baade PD, et al. Cancer statistics in China, 2015. CA Cancer J Clin. 2016;66(2):115–32.CrossRef Chen W, Zheng R, Baade PD, et al. Cancer statistics in China, 2015. CA Cancer J Clin. 2016;66(2):115–32.CrossRef
3.
go back to reference Newstead GM. MR imaging in the management of patients with breast cancer. Semin Ultrasound CT MR. 2006;27(4):320–32.PubMedCrossRef Newstead GM. MR imaging in the management of patients with breast cancer. Semin Ultrasound CT MR. 2006;27(4):320–32.PubMedCrossRef
4.
go back to reference Demartini W, Lehman C. A review of current evidence-based clinical applications for breast magnetic resonance imaging. Top Magn Reson Imaging. 2008;19(3):143–50.PubMedCrossRef Demartini W, Lehman C. A review of current evidence-based clinical applications for breast magnetic resonance imaging. Top Magn Reson Imaging. 2008;19(3):143–50.PubMedCrossRef
5.
go back to reference Saslow D, Boetes C, Burke W, et al. American Cancer Society breast Cancer advisory group. American Cancer Society guidelines for breast screening with MRI as an adjunct to mammography. CA Cancer J Clin. 2007;57(2):75–89.PubMedCrossRef Saslow D, Boetes C, Burke W, et al. American Cancer Society breast Cancer advisory group. American Cancer Society guidelines for breast screening with MRI as an adjunct to mammography. CA Cancer J Clin. 2007;57(2):75–89.PubMedCrossRef
6.
go back to reference Wiener JI, Schilling KJ, Adami C, et al. Assessment of suspected breast cancer by MRI: a prospective clinical trial using a combined kinetic and morphologic analysis. AJR Am J Roentgenol. 2005;184(3):878–86.PubMedCrossRef Wiener JI, Schilling KJ, Adami C, et al. Assessment of suspected breast cancer by MRI: a prospective clinical trial using a combined kinetic and morphologic analysis. AJR Am J Roentgenol. 2005;184(3):878–86.PubMedCrossRef
7.
go back to reference Mussurakis S, Buckley DL, Coady AM, et al. Observer variability in the interpretation of contrast enhanced MRI of the breast. Br J Radiol. 1996;69(827):1009–16.PubMedCrossRef Mussurakis S, Buckley DL, Coady AM, et al. Observer variability in the interpretation of contrast enhanced MRI of the breast. Br J Radiol. 1996;69(827):1009–16.PubMedCrossRef
8.
go back to reference Kim SJ, Morris EA, Liberman L, et al. Observer variability and applicability of BI-RADS terminology for breast MR imaging: invasive carcinomas as focal masses. AJR Am J Roentgenol. 2001;177(3):551–7.PubMedCrossRef Kim SJ, Morris EA, Liberman L, et al. Observer variability and applicability of BI-RADS terminology for breast MR imaging: invasive carcinomas as focal masses. AJR Am J Roentgenol. 2001;177(3):551–7.PubMedCrossRef
9.
go back to reference Giger ML, Chan HP, Boone J. Anniversary paper: history and status of CAD and quantitative image analysis: the role of medical physics and AAPM. Med Phys. 2008;35(12):5799–820.PubMedPubMedCentralCrossRef Giger ML, Chan HP, Boone J. Anniversary paper: history and status of CAD and quantitative image analysis: the role of medical physics and AAPM. Med Phys. 2008;35(12):5799–820.PubMedPubMedCentralCrossRef
10.
go back to reference Giger ML, Karssemeijer N, Schnabel JA. Breast image analysis for risk assessment, detection, diagnosis, and treatment of Cancer. Annu Rev Biomed Eng. 2013;15(1):327–57.PubMedCrossRef Giger ML, Karssemeijer N, Schnabel JA. Breast image analysis for risk assessment, detection, diagnosis, and treatment of Cancer. Annu Rev Biomed Eng. 2013;15(1):327–57.PubMedCrossRef
11.
go back to reference Chen W, Giger ML, Lan L, et al. Computerized interpretation of breast MRI: investigation of enhancement-variance dynamics. Med Phys. 2004;31(5):1076–82.PubMedCrossRef Chen W, Giger ML, Lan L, et al. Computerized interpretation of breast MRI: investigation of enhancement-variance dynamics. Med Phys. 2004;31(5):1076–82.PubMedCrossRef
12.
go back to reference Li H, Zhu Y, Burnside ES, et al. Quantitative MRI radiomics in the prediction of molecular classifications of breast cancer subtypes in the TCGA/TCIA data set. NPJ Breast Cancer. 2016;2:16012.PubMedPubMedCentralCrossRef Li H, Zhu Y, Burnside ES, et al. Quantitative MRI radiomics in the prediction of molecular classifications of breast cancer subtypes in the TCGA/TCIA data set. NPJ Breast Cancer. 2016;2:16012.PubMedPubMedCentralCrossRef
13.
go back to reference Antropova N, Abe H, Giger ML. Use of clinical MRI maximum intensity projections for improved breast lesion classification with deep CNNs. J Med Imaging (Bellingham). 2018;5(1):014503. Antropova N, Abe H, Giger ML. Use of clinical MRI maximum intensity projections for improved breast lesion classification with deep CNNs. J Med Imaging (Bellingham). 2018;5(1):014503.
14.
go back to reference Gallego-Ortiz C, Martel AL. A graph-based lesion characterization and deep embedding approach for improved computer-aided diagnonsis of nonnmass breast MRI lesions. Med Image Anal. 2019;51:116–24.PubMedCrossRef Gallego-Ortiz C, Martel AL. A graph-based lesion characterization and deep embedding approach for improved computer-aided diagnonsis of nonnmass breast MRI lesions. Med Image Anal. 2019;51:116–24.PubMedCrossRef
15.
go back to reference Parekh VS, Jacobs MA. Integrated radiomic framework for breast cancer and tumor biology using advanced machine learning and multiparametric MRI. NPJ Breast Cancer. 2017;3:43.PubMedPubMedCentralCrossRef Parekh VS, Jacobs MA. Integrated radiomic framework for breast cancer and tumor biology using advanced machine learning and multiparametric MRI. NPJ Breast Cancer. 2017;3:43.PubMedPubMedCentralCrossRef
16.
go back to reference Morris EA, Comstock CE, Lee CH, et al. ACR BI-RADS magnetic resonance imaging. In: Sickles EA, Mendelson EB, et al., editors. D’Orsi CJ. ACR BI-RADS atlas, breast imaging reporting and data system. Reston, Va: American College of Radiology; 2013. p. 125–43. Morris EA, Comstock CE, Lee CH, et al. ACR BI-RADS magnetic resonance imaging. In: Sickles EA, Mendelson EB, et al., editors. D’Orsi CJ. ACR BI-RADS atlas, breast imaging reporting and data system. Reston, Va: American College of Radiology; 2013. p. 125–43.
17.
go back to reference Gilhuijs KG, Giger ML, Bick U. Automated analysis of breast lesions in three dimensions using dynamic magnetic resonance imaging. Med Phys. 1998;25(9):1647–54.PubMedCrossRef Gilhuijs KG, Giger ML, Bick U. Automated analysis of breast lesions in three dimensions using dynamic magnetic resonance imaging. Med Phys. 1998;25(9):1647–54.PubMedCrossRef
18.
go back to reference Chen W, Giger ML, Bick U, et al. Automatic identification and classification of characteristic kinetic curves of breast lesions on DCE-MRI. Med Phys. 2006;33(8):2878–87.PubMedCrossRef Chen W, Giger ML, Bick U, et al. Automatic identification and classification of characteristic kinetic curves of breast lesions on DCE-MRI. Med Phys. 2006;33(8):2878–87.PubMedCrossRef
19.
go back to reference Chen W, Giger ML, Li H, et al. Volumetric texture analysis of breast lesions on contrast-enhanced magnetic resonance images. Magn Reson Med. 2007;58(3):562–71.PubMedCrossRef Chen W, Giger ML, Li H, et al. Volumetric texture analysis of breast lesions on contrast-enhanced magnetic resonance images. Magn Reson Med. 2007;58(3):562–71.PubMedCrossRef
20.
go back to reference Neha B, Giger ML, Jansen SA, et al. Cancerous breast lesions on dynamic contrast-enhanced MR images: computerized characterization for image-based prognostic markers. Radiology. 2010;254(3):680–90.CrossRef Neha B, Giger ML, Jansen SA, et al. Cancerous breast lesions on dynamic contrast-enhanced MR images: computerized characterization for image-based prognostic markers. Radiology. 2010;254(3):680–90.CrossRef
21.
go back to reference Kohavi R. A study of cross-validation and bootstrap for accuracy estimation and model selection. In: International joint conference on artificial intelligence. Los Altos: Morgan Kaufmann Publishers Inc; 1995. p. 1137–43. Kohavi R. A study of cross-validation and bootstrap for accuracy estimation and model selection. In: International joint conference on artificial intelligence. Los Altos: Morgan Kaufmann Publishers Inc; 1995. p. 1137–43.
22.
go back to reference Cortes C, Vapnik V. Support-vector networks. Mach Learn. 1995;20(3):273–97. Cortes C, Vapnik V. Support-vector networks. Mach Learn. 1995;20(3):273–97.
23.
go back to reference Metz CE. Some practical issues of experimental design and data analysis in radiological ROC studies. Investig Radiol. 1989;24(3):234–45.CrossRef Metz CE. Some practical issues of experimental design and data analysis in radiological ROC studies. Investig Radiol. 1989;24(3):234–45.CrossRef
24.
go back to reference Metz CE, Herman BA, Roe CA. Statistical comparison of two ROC-curve estimates obtained from partially-paired datasets. Med Decis Mak. 1998;18(1):110–21.CrossRef Metz CE, Herman BA, Roe CA. Statistical comparison of two ROC-curve estimates obtained from partially-paired datasets. Med Decis Mak. 1998;18(1):110–21.CrossRef
26.
go back to reference Reig B, Heacock L, Geras KJ, Moy L. Machine learning in breast MRI. J Magn Reson Imaging. 2019. Reig B, Heacock L, Geras KJ, Moy L. Machine learning in breast MRI. J Magn Reson Imaging. 2019.
27.
go back to reference Sheth D, Giger ML. Artificial intelligence in the interpretation of breast cancer on MRI. J Magn Reson Imaging. 2019. Sheth D, Giger ML. Artificial intelligence in the interpretation of breast cancer on MRI. J Magn Reson Imaging. 2019.
28.
go back to reference Truhn D, Schrading S, Haarburger C, Schneider H, Merhof D, Kuhl C. Radiomic versus convolutional neural networks analysis for classification of contrast-enhancing lesions at multiparametric breast MRI. Radiology. 2019;290(2):290–7.PubMedCrossRef Truhn D, Schrading S, Haarburger C, Schneider H, Merhof D, Kuhl C. Radiomic versus convolutional neural networks analysis for classification of contrast-enhancing lesions at multiparametric breast MRI. Radiology. 2019;290(2):290–7.PubMedCrossRef
29.
go back to reference Shimauchi A, Giger ML, Bhooshan N, et al. Evaluation of clinical breast MR imaging performed with prototype computer-aided diagnosis breast MR imaging workstation: reader study. Radiology. 2012;23(1):696–704. Shimauchi A, Giger ML, Bhooshan N, et al. Evaluation of clinical breast MR imaging performed with prototype computer-aided diagnosis breast MR imaging workstation: reader study. Radiology. 2012;23(1):696–704.
30.
go back to reference Kuhl CK, Schild HH. Dynamic image interpretation of MRI of the breast. J Magn Reson Imaging. 2000;12(6):965–74.PubMedCrossRef Kuhl CK, Schild HH. Dynamic image interpretation of MRI of the breast. J Magn Reson Imaging. 2000;12(6):965–74.PubMedCrossRef
31.
go back to reference Schultz CL, Alfidi RJ, Nelson AD, et al. The effect of motion on two-dimensional Fourier transformation magnetic resonance images. Radiology. 1984;152(1):117–21.PubMedCrossRef Schultz CL, Alfidi RJ, Nelson AD, et al. The effect of motion on two-dimensional Fourier transformation magnetic resonance images. Radiology. 1984;152(1):117–21.PubMedCrossRef
32.
go back to reference Ehman RL, McNamara MT, Brasch RC, et al. Influence of physiologic motion on the appearance of tissue in MR images. Radiology. 1986;159(3):777–82.PubMedCrossRef Ehman RL, McNamara MT, Brasch RC, et al. Influence of physiologic motion on the appearance of tissue in MR images. Radiology. 1986;159(3):777–82.PubMedCrossRef
Metadata
Title
Independent validation of machine learning in diagnosing breast Cancer on magnetic resonance imaging within a single institution
Authors
Yu Ji
Hui Li
Alexandra V. Edwards
John Papaioannou
Wenjuan Ma
Peifang Liu
Maryellen L. Giger
Publication date
01-12-2019
Publisher
BioMed Central
Published in
Cancer Imaging / Issue 1/2019
Electronic ISSN: 1470-7330
DOI
https://doi.org/10.1186/s40644-019-0252-2

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