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Published in: Breast Cancer Research 6/2014

Open Access 01-12-2014 | Research article

Refined histopathological predictors of BRCA1 and BRCA2mutation status: a large-scale analysis of breast cancer characteristics from the BCAC, CIMBA, and ENIGMA consortia

Authors: Amanda B Spurdle, Fergus J Couch, Michael T Parsons, Lesley McGuffog, Daniel Barrowdale, Manjeet K Bolla, Qin Wang, Sue Healey, Rita Katharina Schmutzler, Barbara Wappenschmidt, Kerstin Rhiem, Eric Hahnen, Christoph Engel, Alfons Meindl, Nina Ditsch, Norbert Arnold, Hansjoerg Plendl, Dieter Niederacher, Christian Sutter, Shan Wang-Gohrke, Doris Steinemann, Sabine Preisler-Adams, Karin Kast, Raymonda Varon-Mateeva, Steve Ellis, Debra Frost, Radka Platte, Jo Perkins, D Gareth Evans, Louise Izatt, Ros Eeles, Julian Adlard, Rosemarie Davidson, Trevor Cole, Giulietta Scuvera, Siranoush Manoukian, Bernardo Bonanni, Frederique Mariette, Stefano Fortuzzi, Alessandra Viel, Barbara Pasini, Laura Papi, Liliana Varesco, Rosemary Balleine, Katherine L Nathanson, Susan M Domchek, Kenneth Offitt, Anna Jakubowska, Noralane Lindor, Mads Thomassen, Uffe Birk Jensen, Johanna Rantala, Åke Borg, Irene L Andrulis, Alexander Miron, Thomas VO Hansen, Trinidad Caldes, Susan L Neuhausen, Amanda E Toland, Heli Nevanlinna, Marco Montagna, Judy Garber, Andrew K Godwin, Ana Osorio, Rachel E Factor, Mary B Terry, Timothy R Rebbeck, Beth Y Karlan, Melissa Southey, Muhammad Usman Rashid, Nadine Tung, Paul DP Pharoah, Fiona M Blows, Alison M Dunning, Elena Provenzano, Per Hall, Kamila Czene, Marjanka K Schmidt, Annegien Broeks, Sten Cornelissen, Senno Verhoef, Peter A Fasching, Matthias W Beckmann, Arif B Ekici, Dennis J Slamon, Stig E Bojesen, Børge G Nordestgaard, Sune F Nielsen, Henrik Flyger, Jenny Chang-Claude, Dieter Flesch-Janys, Anja Rudolph, Petra Seibold, Kristiina Aittomäki, Taru A Muranen, Päivi Heikkilä, Carl Blomqvist, Jonine Figueroa, Stephen J Chanock, Louise Brinton, Jolanta Lissowska, Janet E Olson, Vernon S Pankratz, Esther M John, Alice S Whittemore, Dee W West, Ute Hamann, Diana Torres, Hans Ulrich Ulmer, Thomas Rüdiger, Peter Devilee, Robert AEM Tollenaar, Caroline Seynaeve, Christi J Van Asperen, Diana M Eccles, William J Tapper, Lorraine Durcan, Louise Jones, Julian Peto, Isabel dos-Santos-Silva, Olivia Fletcher, Nichola Johnson, Miriam Dwek, Ruth Swann, Anita L Bane, Gord Glendon, Anna M Mulligan, Graham G Giles, Roger L Milne, Laura Baglietto, Catriona McLean, Jane Carpenter, Christine Clarke, Rodney Scott, Hiltrud Brauch, Thomas Brüning, Yon-Dschun Ko, Angela Cox, Simon S Cross, Malcolm WR Reed, Jan Lubinski, Katarzyna Jaworska-Bieniek, Katarzyna Durda, Jacek Gronwald, Thilo Dörk, Natalia Bogdanova, Tjoung-Won Park-Simon, Peter Hillemanns, Christopher A Haiman, Brian E Henderson, Fredrick Schumacher, Loic Le Marchand, Barbara Burwinkel, Frederik Marme, Harald Surovy, Rongxi Yang, Hoda Anton-Culver, Argyrios Ziogas, Maartje J Hooning, J Margriet Collée, John WM Martens, Madeleine MA Tilanus-Linthorst, Hermann Brenner, Aida Karina Dieffenbach, Volke Arndt, Christa Stegmaier, Robert Winqvist, Katri Pylkäs, Arja Jukkola-Vuorinen, Mervi Grip, Annika Lindblom, Sara Margolin, Vijai Joseph, Mark Robson, Rohini Rau-Murthy, Anna González-Neira, José Ignacio Arias, Pilar Zamora, Javier Benítez, Arto Mannermaa, Vesa Kataja, Veli-Matti Kosma, Jaana M Hartikainen, Paolo Peterlongo, Daniela Zaffaroni, Monica Barile, Fabio Capra, Paolo Radice, Soo H Teo, Douglas F Easton, Antonis C Antoniou, Georgia Chenevix-Trench, David E Goldgar, EMBRACE Group, GENICA Network, HEBON Group, kConFab Investigators

Published in: Breast Cancer Research | Issue 6/2014

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Abstract

Introduction

The distribution of histopathological features of invasive breast tumors in BRCA1 or BRCA2 germline mutation carriers differs from that of individuals with no known mutation. Histopathological features thus have utility for mutation prediction, including statistical modeling to assess pathogenicity of BRCA1 or BRCA2 variants of uncertain clinical significance. We analyzed large pathology datasets accrued by the Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA) and the Breast Cancer Association Consortium (BCAC) to reassess histopathological predictors of BRCA1 and BRCA2 mutation status, and provide robust likelihood ratio (LR) estimates for statistical modeling.

Methods

Selection criteria for study/center inclusion were estrogen receptor (ER) status or grade data available for invasive breast cancer diagnosed younger than 70 years. The dataset included 4,477 BRCA1 mutation carriers, 2,565 BRCA2 mutation carriers, and 47,565 BCAC breast cancer cases. Country-stratified estimates of the likelihood of mutation status by histopathological markers were derived using a Mantel-Haenszel approach.

Results

ER-positive phenotype negatively predicted BRCA1 mutation status, irrespective of grade (LRs from 0.08 to 0.90). ER-negative grade 3 histopathology was more predictive of positive BRCA1 mutation status in women 50 years or older (LR = 4.13 (3.70 to 4.62)) versus younger than 50 years (LR = 3.16 (2.96 to 3.37)). For BRCA2, ER-positive grade 3 phenotype modestly predicted positive mutation status irrespective of age (LR = 1.7-fold), whereas ER-negative grade 3 features modestly predicted positive mutation status at 50 years or older (LR = 1.54 (1.27 to 1.88)). Triple-negative tumor status was highly predictive of BRCA1 mutation status for women younger than 50 years (LR = 3.73 (3.43 to 4.05)) and 50 years or older (LR = 4.41 (3.86 to 5.04)), and modestly predictive of positive BRCA2 mutation status in women 50 years or older (LR = 1.79 (1.42 to 2.24)).

Conclusions

These results refine likelihood-ratio estimates for predicting BRCA1 and BRCA2 mutation status by using commonly measured histopathological features. Age at diagnosis is an important variable for most analyses, and grade is more informative than ER status for BRCA2 mutation carrier prediction. The estimates will improve BRCA1 and BRCA2 variant classification and inform patient mutation testing and clinical management.
Appendix
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Metadata
Title
Refined histopathological predictors of BRCA1 and BRCA2mutation status: a large-scale analysis of breast cancer characteristics from the BCAC, CIMBA, and ENIGMA consortia
Authors
Amanda B Spurdle
Fergus J Couch
Michael T Parsons
Lesley McGuffog
Daniel Barrowdale
Manjeet K Bolla
Qin Wang
Sue Healey
Rita Katharina Schmutzler
Barbara Wappenschmidt
Kerstin Rhiem
Eric Hahnen
Christoph Engel
Alfons Meindl
Nina Ditsch
Norbert Arnold
Hansjoerg Plendl
Dieter Niederacher
Christian Sutter
Shan Wang-Gohrke
Doris Steinemann
Sabine Preisler-Adams
Karin Kast
Raymonda Varon-Mateeva
Steve Ellis
Debra Frost
Radka Platte
Jo Perkins
D Gareth Evans
Louise Izatt
Ros Eeles
Julian Adlard
Rosemarie Davidson
Trevor Cole
Giulietta Scuvera
Siranoush Manoukian
Bernardo Bonanni
Frederique Mariette
Stefano Fortuzzi
Alessandra Viel
Barbara Pasini
Laura Papi
Liliana Varesco
Rosemary Balleine
Katherine L Nathanson
Susan M Domchek
Kenneth Offitt
Anna Jakubowska
Noralane Lindor
Mads Thomassen
Uffe Birk Jensen
Johanna Rantala
Åke Borg
Irene L Andrulis
Alexander Miron
Thomas VO Hansen
Trinidad Caldes
Susan L Neuhausen
Amanda E Toland
Heli Nevanlinna
Marco Montagna
Judy Garber
Andrew K Godwin
Ana Osorio
Rachel E Factor
Mary B Terry
Timothy R Rebbeck
Beth Y Karlan
Melissa Southey
Muhammad Usman Rashid
Nadine Tung
Paul DP Pharoah
Fiona M Blows
Alison M Dunning
Elena Provenzano
Per Hall
Kamila Czene
Marjanka K Schmidt
Annegien Broeks
Sten Cornelissen
Senno Verhoef
Peter A Fasching
Matthias W Beckmann
Arif B Ekici
Dennis J Slamon
Stig E Bojesen
Børge G Nordestgaard
Sune F Nielsen
Henrik Flyger
Jenny Chang-Claude
Dieter Flesch-Janys
Anja Rudolph
Petra Seibold
Kristiina Aittomäki
Taru A Muranen
Päivi Heikkilä
Carl Blomqvist
Jonine Figueroa
Stephen J Chanock
Louise Brinton
Jolanta Lissowska
Janet E Olson
Vernon S Pankratz
Esther M John
Alice S Whittemore
Dee W West
Ute Hamann
Diana Torres
Hans Ulrich Ulmer
Thomas Rüdiger
Peter Devilee
Robert AEM Tollenaar
Caroline Seynaeve
Christi J Van Asperen
Diana M Eccles
William J Tapper
Lorraine Durcan
Louise Jones
Julian Peto
Isabel dos-Santos-Silva
Olivia Fletcher
Nichola Johnson
Miriam Dwek
Ruth Swann
Anita L Bane
Gord Glendon
Anna M Mulligan
Graham G Giles
Roger L Milne
Laura Baglietto
Catriona McLean
Jane Carpenter
Christine Clarke
Rodney Scott
Hiltrud Brauch
Thomas Brüning
Yon-Dschun Ko
Angela Cox
Simon S Cross
Malcolm WR Reed
Jan Lubinski
Katarzyna Jaworska-Bieniek
Katarzyna Durda
Jacek Gronwald
Thilo Dörk
Natalia Bogdanova
Tjoung-Won Park-Simon
Peter Hillemanns
Christopher A Haiman
Brian E Henderson
Fredrick Schumacher
Loic Le Marchand
Barbara Burwinkel
Frederik Marme
Harald Surovy
Rongxi Yang
Hoda Anton-Culver
Argyrios Ziogas
Maartje J Hooning
J Margriet Collée
John WM Martens
Madeleine MA Tilanus-Linthorst
Hermann Brenner
Aida Karina Dieffenbach
Volke Arndt
Christa Stegmaier
Robert Winqvist
Katri Pylkäs
Arja Jukkola-Vuorinen
Mervi Grip
Annika Lindblom
Sara Margolin
Vijai Joseph
Mark Robson
Rohini Rau-Murthy
Anna González-Neira
José Ignacio Arias
Pilar Zamora
Javier Benítez
Arto Mannermaa
Vesa Kataja
Veli-Matti Kosma
Jaana M Hartikainen
Paolo Peterlongo
Daniela Zaffaroni
Monica Barile
Fabio Capra
Paolo Radice
Soo H Teo
Douglas F Easton
Antonis C Antoniou
Georgia Chenevix-Trench
David E Goldgar
EMBRACE Group
GENICA Network
HEBON Group
kConFab Investigators
Publication date
01-12-2014
Publisher
BioMed Central
Published in
Breast Cancer Research / Issue 6/2014
Electronic ISSN: 1465-542X
DOI
https://doi.org/10.1186/s13058-014-0474-y

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