Skip to main content
Top
Published in: Critical Care 1/2015

Open Access 01-12-2015 | Research

Associations between single nucleotide polymorphisms in the FAS pathway and acute kidney injury

Authors: Pavan Bhatraju, Christine Hsu, Paramita Mukherjee, Bradford J. Glavan, Amber Burt, Carmen Mikacenic, Jonathan Himmelfarb, Mark Wurfel

Published in: Critical Care | Issue 1/2015

Login to get access

Abstract

Introduction

To determine whether single nucleotide polymorphisms (SNPs) in FAS and related genes are associated with acute kidney injury (AKI) in patients with acute respiratory distress syndrome (ARDS).

Methods

We studied 401 (Caucasian N = 310 and African-American N = 91) patients aged ≥ 13 years with ALI who enrolled in the Fluid and Catheter Treatment Trial (FACTT) between 2000 and 2005 from 20 North American centers. We genotyped 367 SNPs in 45 genes of the Fas/Fas ligand pathway to identify associations between SNPs in Fas pathway genes and the development of AKI by day 2 after enrollment in FACTT, adapting Acute Kidney Injury Network (AKIN) criteria. Written informed consent was obtained from participants or legally authorized surrogates in the original FACTT study and available to use for secondary analysis.

Results

In Caucasian patients, we identified associations between two SNPs and the incidence of AKI (stage 1 and above): rs1050851 and rs2233417; both are found within the gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (NFKBIA). For rs1050851 and rs2233417, the odds ratios (ORs) were 2.34 (95 % confidence interval (CI) = 1.58–3.46, p = 1.06 × 10−5, FDR = 0.003) and 2.46 (CI = 1.61–3.76, p = 1.81 × 10−5, FDR = 0.003) for each minor allele, respectively. The associations were stronger still for AKIN stage 2–3 with respective ORs 4.00 (CI = 2.10–7.62, p = 1.05 × 10−5, FDR = 0.003) and 4.03 (CI = 2.09–7.77, p = 1.88 × 10−5, FDR = 0.003) for each minor allele homozygote. We observed no significant association between these SNPs and AKI in the smaller subset of African Americans.

Conclusion

In Caucasian patients with ALI, the presence of minor alleles in two SNPs in NFKBIA was strongly associated with the development of AKI.

Trial registration

NCT00281268. Registered 20/01/2006.
Appendix
Available only for authorised users
Literature
1.
go back to reference Coca SG, Yusuf B, Shlipak MG, Garg AX, Parikh CR. Long-term risk of mortality and other adverse outcomes after acute kidney injury: a systematic review and meta-analysis. Am J Kidney Dis Off J Natl Kidney Found. 2009;53:961–73. Coca SG, Yusuf B, Shlipak MG, Garg AX, Parikh CR. Long-term risk of mortality and other adverse outcomes after acute kidney injury: a systematic review and meta-analysis. Am J Kidney Dis Off J Natl Kidney Found. 2009;53:961–73.
2.
go back to reference Hsu RK, McCulloch CE, Dudley RA, Lo LJ, Hsu C. Temporal changes in incidence of dialysis-requiring AKI. J Am Soc Nephrol JASN. 2013;24:37–42.PubMed Hsu RK, McCulloch CE, Dudley RA, Lo LJ, Hsu C. Temporal changes in incidence of dialysis-requiring AKI. J Am Soc Nephrol JASN. 2013;24:37–42.PubMed
3.
go back to reference Bellomo R, Kellum JA, Ronco C. Acute kidney injury. Lancet Lond Engl. 2012;380:756–66. Bellomo R, Kellum JA, Ronco C. Acute kidney injury. Lancet Lond Engl. 2012;380:756–66.
4.
go back to reference Uchino S, Kellum JA, Bellomo R, Doig GS, Morimatsu H, Morgera S, et al. Acute renal failure in critically ill patients: a multinational, multicenter study. JAMA. 2005;294:813–8.PubMed Uchino S, Kellum JA, Bellomo R, Doig GS, Morimatsu H, Morgera S, et al. Acute renal failure in critically ill patients: a multinational, multicenter study. JAMA. 2005;294:813–8.PubMed
5.
go back to reference Frank AJ, Sheu C-C, Zhao Y, Chen F, Su L, Gong MN, et al. BCL2 genetic variants are associated with acute kidney injury in septic shock*. Crit Care Med. 2012;40:2116–23.PubMedPubMedCentral Frank AJ, Sheu C-C, Zhao Y, Chen F, Su L, Gong MN, et al. BCL2 genetic variants are associated with acute kidney injury in septic shock*. Crit Care Med. 2012;40:2116–23.PubMedPubMedCentral
6.
go back to reference Perianayagam MC, Tighiouart H, Liangos O, Kouznetsov D, Wald R, Rao F, et al. Polymorphisms in the myeloperoxidase gene locus are associated with acute kidney injury-related outcomes. Kidney Int. 2012;82:909–19.PubMedPubMedCentral Perianayagam MC, Tighiouart H, Liangos O, Kouznetsov D, Wald R, Rao F, et al. Polymorphisms in the myeloperoxidase gene locus are associated with acute kidney injury-related outcomes. Kidney Int. 2012;82:909–19.PubMedPubMedCentral
7.
go back to reference Lerolle N, Nochy D, Guérot E, Bruneval P, Fagon J-Y, Diehl J-L, et al. Histopathology of septic shock induced acute kidney injury: apoptosis and leukocytic infiltration. Intensive Care Med. 2010;36:471–8.PubMed Lerolle N, Nochy D, Guérot E, Bruneval P, Fagon J-Y, Diehl J-L, et al. Histopathology of septic shock induced acute kidney injury: apoptosis and leukocytic infiltration. Intensive Care Med. 2010;36:471–8.PubMed
8.
go back to reference Wajant H. The Fas signaling pathway: more than a paradigm. Science. 2002;296:1635–6.PubMed Wajant H. The Fas signaling pathway: more than a paradigm. Science. 2002;296:1635–6.PubMed
9.
go back to reference Schelling JR, Nkemere N, Kopp JB, Cleveland RP. Fas-dependent fratricidal apoptosis is a mechanism of tubular epithelial cell deletion in chronic renal failure. Lab Investig J Tech Methods Pathol. 1998;78:813–24. Schelling JR, Nkemere N, Kopp JB, Cleveland RP. Fas-dependent fratricidal apoptosis is a mechanism of tubular epithelial cell deletion in chronic renal failure. Lab Investig J Tech Methods Pathol. 1998;78:813–24.
10.
go back to reference Raff MC. Social controls on cell survival and cell death. Nature. 1992;356:397–400.PubMed Raff MC. Social controls on cell survival and cell death. Nature. 1992;356:397–400.PubMed
11.
go back to reference Hughes J, Johnson RJ. Role of Fas (CD95) in tubulointerstitial disease induced by unilateral ureteric obstruction. Am J Physiol. 1999;277:F26–32.PubMed Hughes J, Johnson RJ. Role of Fas (CD95) in tubulointerstitial disease induced by unilateral ureteric obstruction. Am J Physiol. 1999;277:F26–32.PubMed
12.
go back to reference Ortiz-Arduan A, Danoff TM, Kalluri R, González-Cuadrado S, Karp SL, Elkon K, et al. Regulation of Fas and Fas ligand expression in cultured murine renal cells and in the kidney during endotoxemia. Am J Physiol. 1996;271:F1193–201.PubMed Ortiz-Arduan A, Danoff TM, Kalluri R, González-Cuadrado S, Karp SL, Elkon K, et al. Regulation of Fas and Fas ligand expression in cultured murine renal cells and in the kidney during endotoxemia. Am J Physiol. 1996;271:F1193–201.PubMed
13.
go back to reference Ko GJ, Jang HR, Huang Y, Womer KL, Liu M, Higbee E, et al. Blocking Fas ligand on leukocytes attenuates kidney ischemia-reperfusion injury. J Am Soc Nephrol JASN. 2011;22:732–42.PubMed Ko GJ, Jang HR, Huang Y, Womer KL, Liu M, Higbee E, et al. Blocking Fas ligand on leukocytes attenuates kidney ischemia-reperfusion injury. J Am Soc Nephrol JASN. 2011;22:732–42.PubMed
14.
go back to reference Imai Y, Parodo J, Kajikawa O, de Perrot M, Fischer S, Edwards V, et al. Injurious mechanical ventilation and end-organ epithelial cell apoptosis and organ dysfunction in an experimental model of acute respiratory distress syndrome. JAMA. 2003;289:2104–12.PubMed Imai Y, Parodo J, Kajikawa O, de Perrot M, Fischer S, Edwards V, et al. Injurious mechanical ventilation and end-organ epithelial cell apoptosis and organ dysfunction in an experimental model of acute respiratory distress syndrome. JAMA. 2003;289:2104–12.PubMed
15.
go back to reference Glavan BJ, Holden TD, Goss CH, Black RA, Neff MJ, Nathens AB, et al. Genetic variation in the FAS gene and associations with acute lung injury. Am J Respir Crit Care Med. 2011;183:356–63.PubMed Glavan BJ, Holden TD, Goss CH, Black RA, Neff MJ, Nathens AB, et al. Genetic variation in the FAS gene and associations with acute lung injury. Am J Respir Crit Care Med. 2011;183:356–63.PubMed
16.
go back to reference Ricci Z, Ronco C. Pulmonary/renal interaction. Curr Opin Crit Care. 2010;16:13–8.PubMed Ricci Z, Ronco C. Pulmonary/renal interaction. Curr Opin Crit Care. 2010;16:13–8.PubMed
17.
go back to reference Singbartl K. Renal-pulmonary crosstalk. Contrib Nephrol. 2011;174:65–70.PubMed Singbartl K. Renal-pulmonary crosstalk. Contrib Nephrol. 2011;174:65–70.PubMed
18.
go back to reference Basu RK, Donaworth E, Wheeler DS, Devarajan P, Wong HR. Antecedent acute kidney injury worsens subsequent endotoxin-induced lung inflammation in a two-hit mouse model. Am J Physiol Renal Physiol. 2011;301:F597–604.PubMed Basu RK, Donaworth E, Wheeler DS, Devarajan P, Wong HR. Antecedent acute kidney injury worsens subsequent endotoxin-induced lung inflammation in a two-hit mouse model. Am J Physiol Renal Physiol. 2011;301:F597–604.PubMed
19.
go back to reference Schrier RW. Fluid administration in critically ill patients with acute kidney injury. Clin J Am Soc Nephrol CJASN. 2010;5:733–9.PubMed Schrier RW. Fluid administration in critically ill patients with acute kidney injury. Clin J Am Soc Nephrol CJASN. 2010;5:733–9.PubMed
20.
go back to reference Heart N. Lung, and Blood Institute Acute Respiratory Distress Syndrome (ARDS) Clinical Trials Network, Wheeler AP, Bernard GR, Thompson BT, Schoenfeld D, et al. Pulmonary-artery versus central venous catheter to guide treatment of acute lung injury. N Engl J Med. 2006;354:2213–24. Heart N. Lung, and Blood Institute Acute Respiratory Distress Syndrome (ARDS) Clinical Trials Network, Wheeler AP, Bernard GR, Thompson BT, Schoenfeld D, et al. Pulmonary-artery versus central venous catheter to guide treatment of acute lung injury. N Engl J Med. 2006;354:2213–24.
21.
go back to reference Heart N. Lung, and Blood Institute Acute Respiratory Distress Syndrome (ARDS) Clinical Trials Network, Wiedemann HP, Wheeler AP, Bernard GR, Thompson BT, et al. Comparison of two fluid-management strategies in acute lung injury. N Engl J Med. 2006;354:2564–75. Heart N. Lung, and Blood Institute Acute Respiratory Distress Syndrome (ARDS) Clinical Trials Network, Wiedemann HP, Wheeler AP, Bernard GR, Thompson BT, et al. Comparison of two fluid-management strategies in acute lung injury. N Engl J Med. 2006;354:2564–75.
22.
go back to reference Grams ME, Estrella MM. Coresh J, Brower RG, Liu KD, National Heart, Lung, and Blood Institute Acute Respiratory Distress Syndrome Network. Fluid balance, diuretic use, and mortality in acute kidney injury. Clin J Am Soc Nephrol CJASN. 2011;6:966–73.PubMed Grams ME, Estrella MM. Coresh J, Brower RG, Liu KD, National Heart, Lung, and Blood Institute Acute Respiratory Distress Syndrome Network. Fluid balance, diuretic use, and mortality in acute kidney injury. Clin J Am Soc Nephrol CJASN. 2011;6:966–73.PubMed
27.
go back to reference Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. Am J Hum Genet. 2004;74:106–20.PubMed Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. Am J Hum Genet. 2004;74:106–20.PubMed
28.
go back to reference Suarez BK, Taylor C, Bertelsen S, Bierut LJ, Dunn G, Jin CH, et al. An analysis of identical single-nucleotide polymorphisms genotyped by two different platforms. BMC Genet. 2005;6:S152.PubMedPubMedCentral Suarez BK, Taylor C, Bertelsen S, Bierut LJ, Dunn G, Jin CH, et al. An analysis of identical single-nucleotide polymorphisms genotyped by two different platforms. BMC Genet. 2005;6:S152.PubMedPubMedCentral
29.
go back to reference Oliphant A, Barker DL, Stuelpnagel JR, Chee MS. BeadArray technology: enabling an accurate, cost-effective approach to high-throughput genotyping. BioTechniques. 2002;Suppl:56–8. 60–61. Oliphant A, Barker DL, Stuelpnagel JR, Chee MS. BeadArray technology: enabling an accurate, cost-effective approach to high-throughput genotyping. BioTechniques. 2002;Suppl:56–8. 60–61.
31.
32.
go back to reference Mehta RL, Kellum JA, Shah SV, Molitoris BA, Ronco C, Warnock DG, et al. Acute Kidney Injury Network: report of an initiative to improve outcomes in acute kidney injury. Crit Care Lond Engl. 2007;11:R31. Mehta RL, Kellum JA, Shah SV, Molitoris BA, Ronco C, Warnock DG, et al. Acute Kidney Injury Network: report of an initiative to improve outcomes in acute kidney injury. Crit Care Lond Engl. 2007;11:R31.
33.
go back to reference Liu KD, Thompson BT, Ancukiewicz M, Steingrub JS, Douglas IS, Matthay MA, et al. Acute kidney injury in patients with acute lung injury: impact of fluid accumulation on classification of acute kidney injury and associated outcomes. Crit Care Med. 2011;39:2665–71.PubMedPubMedCentral Liu KD, Thompson BT, Ancukiewicz M, Steingrub JS, Douglas IS, Matthay MA, et al. Acute kidney injury in patients with acute lung injury: impact of fluid accumulation on classification of acute kidney injury and associated outcomes. Crit Care Med. 2011;39:2665–71.PubMedPubMedCentral
34.
go back to reference Waikar SS, Betensky RA, Bonventre JV. Creatinine as the gold standard for kidney injury biomarker studies? Nephrol Dial Transplant. 2009;24:3263–5.PubMed Waikar SS, Betensky RA, Bonventre JV. Creatinine as the gold standard for kidney injury biomarker studies? Nephrol Dial Transplant. 2009;24:3263–5.PubMed
36.
go back to reference Ichikawa H, Takada Y, Murakami A, Aggarwal BB. Identification of a novel blocker of I kappa B alpha kinase that enhances cellular apoptosis and inhibits cellular invasion through suppression of NF-kappa B-regulated gene products. J Immunol Baltim Md 1950. 2005;174:7383–92. Ichikawa H, Takada Y, Murakami A, Aggarwal BB. Identification of a novel blocker of I kappa B alpha kinase that enhances cellular apoptosis and inhibits cellular invasion through suppression of NF-kappa B-regulated gene products. J Immunol Baltim Md 1950. 2005;174:7383–92.
37.
go back to reference Takada Y, Andreeff M, Aggarwal BB. Indole-3-carbinol suppresses NF-kappaB and IkappaBalpha kinase activation, causing inhibition of expression of NF-kappaB-regulated antiapoptotic and metastatic gene products and enhancement of apoptosis in myeloid and leukemia cells. Blood. 2005;106:641–9.PubMedPubMedCentral Takada Y, Andreeff M, Aggarwal BB. Indole-3-carbinol suppresses NF-kappaB and IkappaBalpha kinase activation, causing inhibition of expression of NF-kappaB-regulated antiapoptotic and metastatic gene products and enhancement of apoptosis in myeloid and leukemia cells. Blood. 2005;106:641–9.PubMedPubMedCentral
38.
go back to reference Jacobs MD, Harrison SC. Structure of an IkappaBalpha/NF-kappaB complex. Cell. 1998;95:749–58.PubMed Jacobs MD, Harrison SC. Structure of an IkappaBalpha/NF-kappaB complex. Cell. 1998;95:749–58.PubMed
39.
go back to reference Ali S, Hirschfeld AF, Mayer ML, Fortuno ES, Corbett N, Kaplan M, et al. Functional genetic variation in NFKBIA and susceptibility to childhood asthma, bronchiolitis, and bronchopulmonary dysplasia. J Immunol Baltim Md 1950. 2013;190:3949–58. Ali S, Hirschfeld AF, Mayer ML, Fortuno ES, Corbett N, Kaplan M, et al. Functional genetic variation in NFKBIA and susceptibility to childhood asthma, bronchiolitis, and bronchopulmonary dysplasia. J Immunol Baltim Md 1950. 2013;190:3949–58.
40.
go back to reference Lin B, Williams-Skipp C, Tao Y, Schleicher MS, Cano LL, Duke RC, et al. NF-kappaB functions as both a proapoptotic and antiapoptotic regulatory factor within a single cell type. Cell Death Differ. 1999;6:570–82.PubMed Lin B, Williams-Skipp C, Tao Y, Schleicher MS, Cano LL, Duke RC, et al. NF-kappaB functions as both a proapoptotic and antiapoptotic regulatory factor within a single cell type. Cell Death Differ. 1999;6:570–82.PubMed
41.
go back to reference Morrissey JJ, Klahr S. Rapid communication. Enalapril decreases nuclear factor kappa B activation in the kidney with ureteral obstruction. Kidney Int. 1997;52:926–33.PubMed Morrissey JJ, Klahr S. Rapid communication. Enalapril decreases nuclear factor kappa B activation in the kidney with ureteral obstruction. Kidney Int. 1997;52:926–33.PubMed
42.
go back to reference Chen Y-W, Liu F, Tran S, Zhu Y, Hébert M-J, Ingelfinger JR, et al. Reactive oxygen species and nuclear factor-kappa B pathway mediate high glucose-induced Pax-2 gene expression in mouse embryonic mesenchymal epithelial cells and kidney explants. Kidney Int. 2006;70:1607–15.PubMed Chen Y-W, Liu F, Tran S, Zhu Y, Hébert M-J, Ingelfinger JR, et al. Reactive oxygen species and nuclear factor-kappa B pathway mediate high glucose-induced Pax-2 gene expression in mouse embryonic mesenchymal epithelial cells and kidney explants. Kidney Int. 2006;70:1607–15.PubMed
43.
go back to reference Hu Y-M, Pai M-H, Yeh C-L, Hou Y-C, Yeh S-L. Glutamine administration ameliorates sepsis-induced kidney injury by downregulating the high-mobility group box protein-1-mediated pathway in mice. Am J Physiol Renal Physiol. 2012;302:F150–8.PubMed Hu Y-M, Pai M-H, Yeh C-L, Hou Y-C, Yeh S-L. Glutamine administration ameliorates sepsis-induced kidney injury by downregulating the high-mobility group box protein-1-mediated pathway in mice. Am J Physiol Renal Physiol. 2012;302:F150–8.PubMed
44.
go back to reference de Souza ACCP, Volpini RA, Shimizu MH, Sanches TR, Camara NOS, Semedo P, et al. Erythropoietin prevents sepsis-related acute kidney injury in rats by inhibiting NF-κB and upregulating endothelial nitric oxide synthase. Am J Physiol Renal Physiol. 2012;302:F1045–54.PubMed de Souza ACCP, Volpini RA, Shimizu MH, Sanches TR, Camara NOS, Semedo P, et al. Erythropoietin prevents sepsis-related acute kidney injury in rats by inhibiting NF-κB and upregulating endothelial nitric oxide synthase. Am J Physiol Renal Physiol. 2012;302:F1045–54.PubMed
45.
go back to reference Lu JCT. Coca SG, Patel UD, Cantley L, Parikh CR, Translational Research Investigating Biomarkers and Endpoints for Acute Kidney Injury (TRIBE-AKI) Consortium. Searching for genes that matter in acute kidney injury: a systematic review. Clin J Am Soc Nephrol CJASN. 2009;4:1020–31.PubMed Lu JCT. Coca SG, Patel UD, Cantley L, Parikh CR, Translational Research Investigating Biomarkers and Endpoints for Acute Kidney Injury (TRIBE-AKI) Consortium. Searching for genes that matter in acute kidney injury: a systematic review. Clin J Am Soc Nephrol CJASN. 2009;4:1020–31.PubMed
46.
go back to reference Jaber BL, Rao M, Guo D, Balakrishnan VS, Perianayagam MC, Freeman RB, et al. Cytokine gene promoter polymorphisms and mortality in acute renal failure. Cytokine. 2004;25:212–9.PubMed Jaber BL, Rao M, Guo D, Balakrishnan VS, Perianayagam MC, Freeman RB, et al. Cytokine gene promoter polymorphisms and mortality in acute renal failure. Cytokine. 2004;25:212–9.PubMed
47.
go back to reference Stafford-Smith M, Podgoreanu M, Swaminathan M, Phillips-Bute B, Mathew JP, Hauser EH, et al. Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery. Am J Kidney Dis Off J Natl Kidney Found. 2005;45:519–30. Stafford-Smith M, Podgoreanu M, Swaminathan M, Phillips-Bute B, Mathew JP, Hauser EH, et al. Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery. Am J Kidney Dis Off J Natl Kidney Found. 2005;45:519–30.
48.
go back to reference Gaudino M, Di Castelnuovo A, Zamparelli R, Andreotti F, Burzotta F, Iacoviello L, et al. Genetic control of postoperative systemic inflammatory reaction and pulmonary and renal complications after coronary artery surgery. J Thorac Cardiovasc Surg. 2003;126:1107–12.PubMed Gaudino M, Di Castelnuovo A, Zamparelli R, Andreotti F, Burzotta F, Iacoviello L, et al. Genetic control of postoperative systemic inflammatory reaction and pulmonary and renal complications after coronary artery surgery. J Thorac Cardiovasc Surg. 2003;126:1107–12.PubMed
49.
go back to reference Treszl A, Tóth-Heyn P, Kocsis I, Nobilis A, Schuler A, Tulassay T, et al. Interleukin genetic variants and the risk of renal failure in infants with infection. Pediatr Nephrol Berl Ger. 2002;17:713–7. Treszl A, Tóth-Heyn P, Kocsis I, Nobilis A, Schuler A, Tulassay T, et al. Interleukin genetic variants and the risk of renal failure in infants with infection. Pediatr Nephrol Berl Ger. 2002;17:713–7.
Metadata
Title
Associations between single nucleotide polymorphisms in the FAS pathway and acute kidney injury
Authors
Pavan Bhatraju
Christine Hsu
Paramita Mukherjee
Bradford J. Glavan
Amber Burt
Carmen Mikacenic
Jonathan Himmelfarb
Mark Wurfel
Publication date
01-12-2015
Publisher
BioMed Central
Published in
Critical Care / Issue 1/2015
Electronic ISSN: 1364-8535
DOI
https://doi.org/10.1186/s13054-015-1084-5

Other articles of this Issue 1/2015

Critical Care 1/2015 Go to the issue