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Published in: BMC Medical Research Methodology 1/2019

Open Access 01-12-2019 | Acute Gastroenteritis | Research article

Cross-validation of an algorithm detecting acute gastroenteritis episodes from prescribed drug dispensing data in France: comparison with clinical data reported in a primary care surveillance system, winter seasons 2014/15 to 2016/17

Authors: Ana-Maria Vilcu, Thierry Blanchon, Laure Sabatte, Cécile Souty, Milka Maravic, Thomas Hanslik, Olivier Steichen

Published in: BMC Medical Research Methodology | Issue 1/2019

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Abstract

Background

This study compares an algorithm to detect acute gastroenteritis (AG) episodes from drug dispensing data to the validated data reported in a primary care surveillance system in France.

Methods

We used drug dispensing data collected in a drugstore database and data collected by primary care physicians involved in a French surveillance network, from season 2014/15 to 2016/17. We used an adapted version of an AG discrimination algorithm to identify AG episodes from the drugstore database. We used Pearson’s correlation coefficient to evaluate the agreement between weekly AG signals obtained from the two data sources during winter months, in the overall population, by specific age-groups and by regions.

Results

Correlations between AG signals for all ages were 0.84 [95%CI 0.69; 0.92] for season 2014/15, 0.87 [95%CI 0.75; 0.93] for season 2015/16 and 0.94 [95%CI 0.88; 0.97] for season 2016/17. The association between AG signals estimated from two data sources varied significantly across age groups in season 2016/17 (p-value < 0.01), and across regions in all three seasons studied (p-value < 0.01).

Conclusions

There is a strong agreement between the dynamic of AG activity estimated from drug dispensing data and from validated primary care surveillance data collected during winter months in the overall population but the agreement is poorer in several age groups and in several regions. Once automated, the reuse of drug dispensing data, already collected for reimbursement purposes, could be a cost-efficient method to monitor AG activity at the national level.
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Literature
2.
go back to reference Tam CC, O'Brien SJ, Tompkins DS, Bolton FJ, Berry L, Dodds J, et al. Changes in causes of acute gastroenteritis in the United Kingdom over 15 years: microbiologic findings from 2 prospective, population-based studies of infectious intestinal disease. Clin Infect Dis. 2012;54(9):1275–86. https://doi.org/10.1093/cid/cis028.CrossRefPubMed Tam CC, O'Brien SJ, Tompkins DS, Bolton FJ, Berry L, Dodds J, et al. Changes in causes of acute gastroenteritis in the United Kingdom over 15 years: microbiologic findings from 2 prospective, population-based studies of infectious intestinal disease. Clin Infect Dis. 2012;54(9):1275–86. https://​doi.​org/​10.​1093/​cid/​cis028.CrossRefPubMed
7.
go back to reference Kosek M, Bern C, Guerrant RL. The global burden of diarrhoeal disease, as estimated from studies published between 1992 and 2000. Bull World Health Organ. 2003;81(3):197–204.PubMedPubMedCentral Kosek M, Bern C, Guerrant RL. The global burden of diarrhoeal disease, as estimated from studies published between 1992 and 2000. Bull World Health Organ. 2003;81(3):197–204.PubMedPubMedCentral
14.
go back to reference Tuppin P, Rudant J, Constantinou P, Gastaldi-Menager C, Rachas A, de Roquefeuil L, et al. Value of a national administrative database to guide public decisions: from the systeme national d'information interregimes de l'Assurance Maladie (SNIIRAM) to the systeme national des donnees de sante (SNDS) in France. Rev Epidemiol Sante Publique. 2017;65 Suppl 4:S149–s67. https://doi.org/10.1016/j.respe.2017.05.004.CrossRefPubMed Tuppin P, Rudant J, Constantinou P, Gastaldi-Menager C, Rachas A, de Roquefeuil L, et al. Value of a national administrative database to guide public decisions: from the systeme national d'information interregimes de l'Assurance Maladie (SNIIRAM) to the systeme national des donnees de sante (SNDS) in France. Rev Epidemiol Sante Publique. 2017;65 Suppl 4:S149–s67. https://​doi.​org/​10.​1016/​j.​respe.​2017.​05.​004.CrossRefPubMed
15.
go back to reference Beaudeau P. Surveillance syndromique des gastroentérites aiguës : une opportunité pour la prévention du risque infectieux attribuable à l’ingestion d’eau du robinet: UNIVERSITÉ DE RENNES 1; 2012. Beaudeau P. Surveillance syndromique des gastroentérites aiguës : une opportunité pour la prévention du risque infectieux attribuable à l’ingestion d’eau du robinet: UNIVERSITÉ DE RENNES 1; 2012.
16.
go back to reference Beaudeau P, Bentayeb M., Corso M., Rambaud L., Galey C. Les données de l’entrepôt de cas de gastro-entérite médicalisés issues du SNIIRAM : description, qualité et utilisation. Saint-Maurice: Santé publique France2017. Beaudeau P, Bentayeb M., Corso M., Rambaud L., Galey C. Les données de l’entrepôt de cas de gastro-entérite médicalisés issues du SNIIRAM : description, qualité et utilisation. Saint-Maurice: Santé publique France2017.
17.
go back to reference Devillier P, Molimard M, Ansolabehere X, Bardoulat I, Coulombel N, Maurel F, et al. Immunotherapy with grass pollen tablets reduces medication dispensing for allergic rhinitis and asthma: a retrospective database study in France. Allergy. 2018. https://doi.org/10.1111/all.13705. Devillier P, Molimard M, Ansolabehere X, Bardoulat I, Coulombel N, Maurel F, et al. Immunotherapy with grass pollen tablets reduces medication dispensing for allergic rhinitis and asthma: a retrospective database study in France. Allergy. 2018. https://​doi.​org/​10.​1111/​all.​13705.
19.
go back to reference Flahault A, Hanslik T. Epidemiology of viral gastroenteritis in France and Europe. Bull Acad Natl Med. 2010;194(8):1415–24 discussion 24-5.PubMed Flahault A, Hanslik T. Epidemiology of viral gastroenteritis in France and Europe. Bull Acad Natl Med. 2010;194(8):1415–24 discussion 24-5.PubMed
22.
go back to reference ISO. ISO8601:2004(en) data elements and interchange formats – information interchange – representation of dates and times. Geneva: International Organization for Standardization; 2004. ISO. ISO8601:2004(en) data elements and interchange formats – information interchange – representation of dates and times. Geneva: International Organization for Standardization; 2004.
23.
go back to reference Commission) EE. NUTS - Nomenclature of territorial units for statistics. . Commission) EE. NUTS - Nomenclature of territorial units for statistics. .
24.
go back to reference Core R. Team. R: a language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical. Computing. 2017. Core R. Team. R: a language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical. Computing. 2017.
25.
go back to reference PRAC recommends restricting use of domperidone. 2014. PRAC recommends restricting use of domperidone. 2014.
Metadata
Title
Cross-validation of an algorithm detecting acute gastroenteritis episodes from prescribed drug dispensing data in France: comparison with clinical data reported in a primary care surveillance system, winter seasons 2014/15 to 2016/17
Authors
Ana-Maria Vilcu
Thierry Blanchon
Laure Sabatte
Cécile Souty
Milka Maravic
Thomas Hanslik
Olivier Steichen
Publication date
01-12-2019
Publisher
BioMed Central
Published in
BMC Medical Research Methodology / Issue 1/2019
Electronic ISSN: 1471-2288
DOI
https://doi.org/10.1186/s12874-019-0745-5

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