Skip to main content
Top
Published in: Molecular Autism 1/2011

Open Access 01-12-2011 | Research

Autism risk assessment in siblings of affected children using sex-specific genetic scores

Authors: Jerome Carayol, Gerard D Schellenberg, Beth Dombroski, Emmanuelle Genin, Francis Rousseau, Geraldine Dawson

Published in: Molecular Autism | Issue 1/2011

Login to get access

Abstract

Background

The inheritance pattern in most cases of autism is complex. The risk of autism is increased in siblings of children with autism and previous studies have indicated that the level of risk can be further identified by the accumulation of multiple susceptibility single nucleotide polymorphisms (SNPs) allowing for the identification of a higher-risk subgroup among siblings. As a result of the sex difference in the prevalence of autism, we explored the potential for identifying sex-specific autism susceptibility SNPs in siblings of children with autism and the ability to develop a sex-specific risk assessment genetic scoring system.

Methods

SNPs were chosen from genes known to be associated with autism. These markers were evaluated using an exploratory sample of 480 families from the Autism Genetic Resource Exchange (AGRE) repository. A reproducibility index (RI) was proposed and calculated in all children with autism and in males and females separately. Differing genetic scoring models were then constructed to develop a sex-specific genetic score model designed to identify individuals with a higher risk of autism. The ability of the genetic scores to identify high-risk children was then evaluated and replicated in an independent sample of 351 affected and 90 unaffected siblings from families with at least 1 child with autism.

Results

We identified three risk SNPs that had a high RI in males, two SNPs with a high RI in females, and three SNPs with a high RI in both sexes. Using these results, genetic scoring models for males and females were developed which demonstrated a significant association with autism (P = 2.2 × 10-6 and 1.9 × 10-5, respectively).

Conclusions

Our results demonstrate that individual susceptibility associated SNPs for autism may have important differential sex effects. We also show that a sex-specific risk score based on the presence of multiple susceptibility associated SNPs allow for the identification of subgroups of siblings of children with autism who have a significantly higher risk of autism.
Literature
1.
go back to reference Johnson CP, Myers SM: Identification and evaluation of children with autism spectrum disorders. Pediatrics. 2007, 120: 1183-1215. 10.1542/peds.2007-2361.CrossRefPubMed Johnson CP, Myers SM: Identification and evaluation of children with autism spectrum disorders. Pediatrics. 2007, 120: 1183-1215. 10.1542/peds.2007-2361.CrossRefPubMed
2.
go back to reference Rice CE: Prevalence of autism spectrum disorders - Autism and Developmental Disabilities Monitoring Network, United States, 2006. MMWR Surveill Summ. 2009, 58: 1-20. Rice CE: Prevalence of autism spectrum disorders - Autism and Developmental Disabilities Monitoring Network, United States, 2006. MMWR Surveill Summ. 2009, 58: 1-20.
3.
go back to reference Constantino JN, Zhang Y, Frazier T, Abbacchi AM, Law P: Sibling recurrence and the genetic epidemiology of autism. Am J Psychiatry. 2010, 167: 1349-1356. 10.1176/appi.ajp.2010.09101470.PubMedCentralCrossRefPubMed Constantino JN, Zhang Y, Frazier T, Abbacchi AM, Law P: Sibling recurrence and the genetic epidemiology of autism. Am J Psychiatry. 2010, 167: 1349-1356. 10.1176/appi.ajp.2010.09101470.PubMedCentralCrossRefPubMed
4.
go back to reference Muhle R, Trentacoste SV, Rapin I: The genetics of autism. Pediatrics. 2004, 113: e472-e486. 10.1542/peds.113.5.e472.CrossRefPubMed Muhle R, Trentacoste SV, Rapin I: The genetics of autism. Pediatrics. 2004, 113: e472-e486. 10.1542/peds.113.5.e472.CrossRefPubMed
5.
go back to reference Jorde LB, Hasstedt SJ, Ritvo ER, Mason-Brothers A, Freeman BJ, Pingree C, McMahon WM, Petersen B, Jenson WR, Mo A: Complex segregation analysis of autism. Am J Hum Genet. 1991, 49: 932-938.PubMedCentralPubMed Jorde LB, Hasstedt SJ, Ritvo ER, Mason-Brothers A, Freeman BJ, Pingree C, McMahon WM, Petersen B, Jenson WR, Mo A: Complex segregation analysis of autism. Am J Hum Genet. 1991, 49: 932-938.PubMedCentralPubMed
6.
go back to reference Autism Genome Project Consortium, Szatmari P, Paterson AD, Zwaigenbaum L, Roberts W, Brian J, Liu XQ, Vincent JB, Skaug JL, Thompson AP, Senman L, Feuk L, Qian C, Bryson SE, Jones MB, Marshall CR, Scherer SW, Vieland VJ, Bartlett C, Mangin LV, Goedken R, Segre A, Pericak-Vance MA, Cuccaro ML, Gilbert JR, Wright HH, Abramson RK, Betancur C, Bourgeron T, Gillberg C: Mapping autism risk loci using genetic linkage and chromosomal rearrangements. Nat Genet. 2007, 39: 319-328. 10.1038/ng1985.CrossRef Autism Genome Project Consortium, Szatmari P, Paterson AD, Zwaigenbaum L, Roberts W, Brian J, Liu XQ, Vincent JB, Skaug JL, Thompson AP, Senman L, Feuk L, Qian C, Bryson SE, Jones MB, Marshall CR, Scherer SW, Vieland VJ, Bartlett C, Mangin LV, Goedken R, Segre A, Pericak-Vance MA, Cuccaro ML, Gilbert JR, Wright HH, Abramson RK, Betancur C, Bourgeron T, Gillberg C: Mapping autism risk loci using genetic linkage and chromosomal rearrangements. Nat Genet. 2007, 39: 319-328. 10.1038/ng1985.CrossRef
7.
go back to reference Fenske E, Zalenski S, Krants P, McClannahand L: Age at intervention and treatment outcome for autistic children in a comprehensive intervention program. Special issue: early intervention. Anal Interven Devel. 1985, 5: 49-58. Fenske E, Zalenski S, Krants P, McClannahand L: Age at intervention and treatment outcome for autistic children in a comprehensive intervention program. Special issue: early intervention. Anal Interven Devel. 1985, 5: 49-58.
8.
go back to reference Rogers SJ: Empirically supported comprehensive treatments for young children with autism. J Clin Child Psychol. 1998, 27: 168-179. 10.1207/s15374424jccp2702_4.CrossRefPubMed Rogers SJ: Empirically supported comprehensive treatments for young children with autism. J Clin Child Psychol. 1998, 27: 168-179. 10.1207/s15374424jccp2702_4.CrossRefPubMed
9.
10.
go back to reference Alarcón M, Abrahams BS, Stone JL, Duvall JA, Perederiy JV, Bomar JM, Sebat J, Wigler M, Martin CL, Ledbetter DH: Linkage, association, and gene-expression analyses identify CNTNAP2 as an autism-susceptibility gene. Am J Hum Genet. 2008, 82: 150-159. 10.1016/j.ajhg.2007.09.005.PubMedCentralCrossRefPubMed Alarcón M, Abrahams BS, Stone JL, Duvall JA, Perederiy JV, Bomar JM, Sebat J, Wigler M, Martin CL, Ledbetter DH: Linkage, association, and gene-expression analyses identify CNTNAP2 as an autism-susceptibility gene. Am J Hum Genet. 2008, 82: 150-159. 10.1016/j.ajhg.2007.09.005.PubMedCentralCrossRefPubMed
11.
go back to reference Arking DE, Cutler DJ, Brune CW, Teslovich TM, West K, Ikeda M, Rea A, Guy M, Lin S, Cook EH, Chakravarti A: A common genetic variant in the neurexin superfamily member CNTNAP2 increases familial risk of autism. Am J Hum Genet. 2008, 82: 160-164. 10.1016/j.ajhg.2007.09.015.PubMedCentralCrossRefPubMed Arking DE, Cutler DJ, Brune CW, Teslovich TM, West K, Ikeda M, Rea A, Guy M, Lin S, Cook EH, Chakravarti A: A common genetic variant in the neurexin superfamily member CNTNAP2 increases familial risk of autism. Am J Hum Genet. 2008, 82: 160-164. 10.1016/j.ajhg.2007.09.015.PubMedCentralCrossRefPubMed
12.
go back to reference Bakkaloglu B, O'Roak BJ, Louvi A, Gupta AR, Abelson JF, Morgan TM, Chawarska K, Klin A, Ercan-Sencicek AG, Stillman AA, Tanriover G, Abrahams BS, Duvall JA, Robbins EM, Geschwind DH, Biederer T, Gunel M, Lifton RP, State MW: Molecular cytogenetic analysis and resequencing of contactin associated protein-like 2 in autism spectrum disorders. Am J Hum Genet. 2008, 82: 165-173. 10.1016/j.ajhg.2007.09.017.PubMedCentralCrossRefPubMed Bakkaloglu B, O'Roak BJ, Louvi A, Gupta AR, Abelson JF, Morgan TM, Chawarska K, Klin A, Ercan-Sencicek AG, Stillman AA, Tanriover G, Abrahams BS, Duvall JA, Robbins EM, Geschwind DH, Biederer T, Gunel M, Lifton RP, State MW: Molecular cytogenetic analysis and resequencing of contactin associated protein-like 2 in autism spectrum disorders. Am J Hum Genet. 2008, 82: 165-173. 10.1016/j.ajhg.2007.09.017.PubMedCentralCrossRefPubMed
13.
go back to reference Poot M, Beyer V, Schwaab I, Damatova N, Slot R, Prothero J, Holder SE, Haaf T: Disruption of CNTNAP2 and additional structural genome changes in a boy with speech delay and autism spectrum disorder. Neurogenetics. 2009, 11: 81-89.CrossRefPubMed Poot M, Beyer V, Schwaab I, Damatova N, Slot R, Prothero J, Holder SE, Haaf T: Disruption of CNTNAP2 and additional structural genome changes in a boy with speech delay and autism spectrum disorder. Neurogenetics. 2009, 11: 81-89.CrossRefPubMed
14.
go back to reference Bonora E, Beyer KS, Lamb JA, Parr JR, Klauck SM, Benner A, Paolucci M, Abbott A, Ragoussis I, Poustka A, Bailey AJ, Monaco AP, International Molecular Genetic Study of Autism (IMGSAC): Analysis of reelin as a candidate gene for autism. Mol Psychiatry. 2003, 8: 885-892. 10.1038/sj.mp.4001310.CrossRefPubMed Bonora E, Beyer KS, Lamb JA, Parr JR, Klauck SM, Benner A, Paolucci M, Abbott A, Ragoussis I, Poustka A, Bailey AJ, Monaco AP, International Molecular Genetic Study of Autism (IMGSAC): Analysis of reelin as a candidate gene for autism. Mol Psychiatry. 2003, 8: 885-892. 10.1038/sj.mp.4001310.CrossRefPubMed
15.
go back to reference Li H, Li Y, Shao J, Li R, Qin Y, Xie C, Zhao Z: The association analysis of RELN and GRM8 genes with autistic spectrum disorder in Chinese Han population. Am J Med Genet B Neuropsychiatr Genet. 2008, 147B: 194-200. 10.1002/ajmg.b.30584.CrossRefPubMed Li H, Li Y, Shao J, Li R, Qin Y, Xie C, Zhao Z: The association analysis of RELN and GRM8 genes with autistic spectrum disorder in Chinese Han population. Am J Med Genet B Neuropsychiatr Genet. 2008, 147B: 194-200. 10.1002/ajmg.b.30584.CrossRefPubMed
16.
go back to reference Persico AM, D'Agruma L, Maiorano N, Totaro A, Militerni R, Bravaccio C, Wassink TH, Schneider C, Melmed R, Trillo S, Montecchi F, Palermo M, Pascucci T, Puglisi-Allegra S, Reichelt KL, Conciatori M, Marino R, Quattrocchi CC, Baldi A, Zelante L, Gasparini P, Keller F, Collaborative Linkage Study of Autism: Reelin gene alleles and haplotypes as a factor predisposing to autistic disorder. Mol Psychiatry. 2001, 6: 150-159. 10.1038/sj.mp.4000850.CrossRefPubMed Persico AM, D'Agruma L, Maiorano N, Totaro A, Militerni R, Bravaccio C, Wassink TH, Schneider C, Melmed R, Trillo S, Montecchi F, Palermo M, Pascucci T, Puglisi-Allegra S, Reichelt KL, Conciatori M, Marino R, Quattrocchi CC, Baldi A, Zelante L, Gasparini P, Keller F, Collaborative Linkage Study of Autism: Reelin gene alleles and haplotypes as a factor predisposing to autistic disorder. Mol Psychiatry. 2001, 6: 150-159. 10.1038/sj.mp.4000850.CrossRefPubMed
17.
go back to reference Salinger WL, Ladrow P, Wheeler C: Behavioral phenotype of the reeler mutant mouse: effects of RELN gene dosage and social isolation. Behav Neurosci. 2003, 117: 1257-1275.CrossRefPubMed Salinger WL, Ladrow P, Wheeler C: Behavioral phenotype of the reeler mutant mouse: effects of RELN gene dosage and social isolation. Behav Neurosci. 2003, 117: 1257-1275.CrossRefPubMed
18.
go back to reference Serajee FJ, Zhong H, Mahbubul Huq AH: Association of Reelin gene polymorphisms with autism. Genomics. 2006, 87: 75-83. 10.1016/j.ygeno.2005.09.008.CrossRefPubMed Serajee FJ, Zhong H, Mahbubul Huq AH: Association of Reelin gene polymorphisms with autism. Genomics. 2006, 87: 75-83. 10.1016/j.ygeno.2005.09.008.CrossRefPubMed
19.
go back to reference Skaar DA, Shao Y, Haines JL, Stenger JE, Jaworski J, Martin ER, DeLong GR, Moore JH, McCauley JL, Sutcliffe JS, Ashley-Koch AE, Cuccaro ML, Folstein SE, Gilbert JR, Pericak-Vance MA: Analysis of the RELN gene as a genetic risk factor for autism. Mol Psychiatry. 2005, 10: 563-571. 10.1038/sj.mp.4001614.CrossRefPubMed Skaar DA, Shao Y, Haines JL, Stenger JE, Jaworski J, Martin ER, DeLong GR, Moore JH, McCauley JL, Sutcliffe JS, Ashley-Koch AE, Cuccaro ML, Folstein SE, Gilbert JR, Pericak-Vance MA: Analysis of the RELN gene as a genetic risk factor for autism. Mol Psychiatry. 2005, 10: 563-571. 10.1038/sj.mp.4001614.CrossRefPubMed
20.
go back to reference Buxbaum JD, Silverman JM, Smith CJ, Greenberg DA, Kilifarski M, Reichert J, Cook EH, Fang Y, Song CY, Vitale R: Association between a GABRB3 polymorphism and autism. Mol Psychiatry. 2002, 7: 311-316. 10.1038/sj.mp.4001011.CrossRefPubMed Buxbaum JD, Silverman JM, Smith CJ, Greenberg DA, Kilifarski M, Reichert J, Cook EH, Fang Y, Song CY, Vitale R: Association between a GABRB3 polymorphism and autism. Mol Psychiatry. 2002, 7: 311-316. 10.1038/sj.mp.4001011.CrossRefPubMed
21.
go back to reference Cook EH, Courchesne RY, Cox NJ, Lord C, Gonen D, Guter SJ, Lincoln A, Nix K, Haas R, Leventhal BL, Courchesne E: Linkage-disequilibrium mapping of autistic disorder, with 15q11-13 markers. Am J Hum Genet. 1998, 62: 1077-1083. 10.1086/301832.PubMedCentralCrossRefPubMed Cook EH, Courchesne RY, Cox NJ, Lord C, Gonen D, Guter SJ, Lincoln A, Nix K, Haas R, Leventhal BL, Courchesne E: Linkage-disequilibrium mapping of autistic disorder, with 15q11-13 markers. Am J Hum Genet. 1998, 62: 1077-1083. 10.1086/301832.PubMedCentralCrossRefPubMed
22.
go back to reference DeLorey TM, Sahbaie P, Hashemi E, Homanics GE, Clark JD: Gabrb3 gene deficient mice exhibit impaired social and exploratory behaviors, deficits in non-selective attention and hypoplasia of cerebellar vermal lobules: a potential model of autism spectrum disorder. Behav Brain Res. 2008, 187: 207-220. 10.1016/j.bbr.2007.09.009.PubMedCentralCrossRefPubMed DeLorey TM, Sahbaie P, Hashemi E, Homanics GE, Clark JD: Gabrb3 gene deficient mice exhibit impaired social and exploratory behaviors, deficits in non-selective attention and hypoplasia of cerebellar vermal lobules: a potential model of autism spectrum disorder. Behav Brain Res. 2008, 187: 207-220. 10.1016/j.bbr.2007.09.009.PubMedCentralCrossRefPubMed
23.
go back to reference Samaco RC, Hogart A, LaSalle JM: Epigenetic overlap in autism-spectrum neurodevelopmental disorders: MECP2 deficiency causes reduced expression of UBE3A and GABRB3. Hum Mol Genet. 2005, 14: 483-492.PubMedCentralCrossRefPubMed Samaco RC, Hogart A, LaSalle JM: Epigenetic overlap in autism-spectrum neurodevelopmental disorders: MECP2 deficiency causes reduced expression of UBE3A and GABRB3. Hum Mol Genet. 2005, 14: 483-492.PubMedCentralCrossRefPubMed
24.
go back to reference Carayol J, Schellenberg GD, Tores F, Hager J, Ziegler A, Dawson G: Assessing the impact of a combined analysis of four common low-risk genetic variants on autism risk. Molecular Autism. 2010, 1: 4-10.1186/2040-2392-1-4.PubMedCentralCrossRefPubMed Carayol J, Schellenberg GD, Tores F, Hager J, Ziegler A, Dawson G: Assessing the impact of a combined analysis of four common low-risk genetic variants on autism risk. Molecular Autism. 2010, 1: 4-10.1186/2040-2392-1-4.PubMedCentralCrossRefPubMed
25.
go back to reference Gillberg C, Steffenburg S, Schaumann H: Is autism more common now than ten years ago?. Br J Psychiatry. 1991, 158: 403-409. 10.1192/bjp.158.3.403.CrossRefPubMed Gillberg C, Steffenburg S, Schaumann H: Is autism more common now than ten years ago?. Br J Psychiatry. 1991, 158: 403-409. 10.1192/bjp.158.3.403.CrossRefPubMed
26.
go back to reference Amiet C, Gourfinkel-An I, Bouzamondo A, Tordjman S, Baulac M, Lechat P, Mottron L, Cohen D: Epilepsy in autism is associated with intellectual disability and gender: evidence from a meta-analysis. Biol Psychiatry. 2008, 64: 577-582. 10.1016/j.biopsych.2008.04.030.CrossRefPubMed Amiet C, Gourfinkel-An I, Bouzamondo A, Tordjman S, Baulac M, Lechat P, Mottron L, Cohen D: Epilepsy in autism is associated with intellectual disability and gender: evidence from a meta-analysis. Biol Psychiatry. 2008, 64: 577-582. 10.1016/j.biopsych.2008.04.030.CrossRefPubMed
27.
go back to reference Harrison PJ, Tunbridge EM: Catechol-O-methyltransferase (COMT): a gene contributing to sex differences in brain function, and to sexual dimorphism in the predisposition to psychiatric disorders. Neuropsychopharmacology. 2008, 33: 3037-3045. 10.1038/sj.npp.1301543.CrossRefPubMed Harrison PJ, Tunbridge EM: Catechol-O-methyltransferase (COMT): a gene contributing to sex differences in brain function, and to sexual dimorphism in the predisposition to psychiatric disorders. Neuropsychopharmacology. 2008, 33: 3037-3045. 10.1038/sj.npp.1301543.CrossRefPubMed
28.
go back to reference Stone JL, Merriman B, Cantor RM, Yonan AL, Gilliam TC, Geschwind DH, Nelson SF: Evidence for sex-specific risk alleles in autism spectrum disorder. Am J Hum Genet. 2004, 75: 1117-1123. 10.1086/426034.PubMedCentralCrossRefPubMed Stone JL, Merriman B, Cantor RM, Yonan AL, Gilliam TC, Geschwind DH, Nelson SF: Evidence for sex-specific risk alleles in autism spectrum disorder. Am J Hum Genet. 2004, 75: 1117-1123. 10.1086/426034.PubMedCentralCrossRefPubMed
29.
go back to reference McCarthy MI, Abecasis GR, Cardon LR, Goldstein DB, Little J, Ioannidis JP, Hirschhorn JN: Genome-wide association studies for complex traits: consensus, uncertainty and challenges. Nat Rev Genet. 2008, 9: 356-369. 10.1038/nrg2344.CrossRefPubMed McCarthy MI, Abecasis GR, Cardon LR, Goldstein DB, Little J, Ioannidis JP, Hirschhorn JN: Genome-wide association studies for complex traits: consensus, uncertainty and challenges. Nat Rev Genet. 2008, 9: 356-369. 10.1038/nrg2344.CrossRefPubMed
30.
go back to reference Shao Y, Raiford KL, Wolpert CM, Cope HA, Ravan SA, Ashley-Koch AA, Abramson RK, Wright HH, DeLong RG, Gilbert JR, Cuccaro ML, Pericak-Vance MA: Phenotypic homogeneity provides increased support for linkage on chromosome 2 in autistic disorder. Am J Hum Genet. 2002, 70: 1058-1061. 10.1086/339765.PubMedCentralCrossRefPubMed Shao Y, Raiford KL, Wolpert CM, Cope HA, Ravan SA, Ashley-Koch AA, Abramson RK, Wright HH, DeLong RG, Gilbert JR, Cuccaro ML, Pericak-Vance MA: Phenotypic homogeneity provides increased support for linkage on chromosome 2 in autistic disorder. Am J Hum Genet. 2002, 70: 1058-1061. 10.1086/339765.PubMedCentralCrossRefPubMed
31.
go back to reference Cantor RM, Kono N, Duvall JA, Alvarez-Retuerto A, Stone JL, Alarcon M, Nelson SF, Geschwind DH: Replication of autism linkage: fine-mapping peak at 17q21. Am J Hum Genet. 2005, 76: 1050-1056. 10.1086/430278.PubMedCentralCrossRefPubMed Cantor RM, Kono N, Duvall JA, Alvarez-Retuerto A, Stone JL, Alarcon M, Nelson SF, Geschwind DH: Replication of autism linkage: fine-mapping peak at 17q21. Am J Hum Genet. 2005, 76: 1050-1056. 10.1086/430278.PubMedCentralCrossRefPubMed
32.
go back to reference Lamb JA, Barnby G, Bonora E, Sykes N, Bacchelli E, Blasi F, Maestrini E, Broxholme J, Tzenova J, Weeks D, Bailey AJ, Monaco AP, International Molecular Genetic Study of Autism Consortium (IMGSAC): Analysis of IMGSAC autism susceptibility loci: evidence for sex limited and parent of origin specific effects. J Med Genet. 2005, 42: 132-137. 10.1136/jmg.2004.025668.PubMedCentralCrossRefPubMed Lamb JA, Barnby G, Bonora E, Sykes N, Bacchelli E, Blasi F, Maestrini E, Broxholme J, Tzenova J, Weeks D, Bailey AJ, Monaco AP, International Molecular Genetic Study of Autism Consortium (IMGSAC): Analysis of IMGSAC autism susceptibility loci: evidence for sex limited and parent of origin specific effects. J Med Genet. 2005, 42: 132-137. 10.1136/jmg.2004.025668.PubMedCentralCrossRefPubMed
33.
go back to reference Buxbaum JD, Silverman JM, Smith CJ, Kilifarski M, Reichert J, Hollander E, Lawlor BA, Fitzgerald M, Greenberg DA, Davis KL: Evidence for a susceptibility gene for autism on chromosome 2 and for genetic heterogeneity. Am J Hum Genet. 2001, 68: 1514-1520. 10.1086/320588.PubMedCentralCrossRefPubMed Buxbaum JD, Silverman JM, Smith CJ, Kilifarski M, Reichert J, Hollander E, Lawlor BA, Fitzgerald M, Greenberg DA, Davis KL: Evidence for a susceptibility gene for autism on chromosome 2 and for genetic heterogeneity. Am J Hum Genet. 2001, 68: 1514-1520. 10.1086/320588.PubMedCentralCrossRefPubMed
34.
go back to reference Shao Y, Wolpert CM, Raiford KL, Menold MM, Donnelly SL, Ravan SA, Bass MP, McClain C, von Wendt L, Vance JM, Abramson RH, Wright HH, Ashley-Koch A, Gilbert JR, DeLong RG, Cuccaro ML, Pericak-Vance MA: Genomic screen and follow-up analysis for autistic disorder. Am J Med Genet. 2002, 114: 99-105. 10.1002/ajmg.10153.CrossRefPubMed Shao Y, Wolpert CM, Raiford KL, Menold MM, Donnelly SL, Ravan SA, Bass MP, McClain C, von Wendt L, Vance JM, Abramson RH, Wright HH, Ashley-Koch A, Gilbert JR, DeLong RG, Cuccaro ML, Pericak-Vance MA: Genomic screen and follow-up analysis for autistic disorder. Am J Med Genet. 2002, 114: 99-105. 10.1002/ajmg.10153.CrossRefPubMed
35.
go back to reference Buxbaum JD, Silverman J, Keddache M, Smith CJ, Hollander E, Ramoz N, Reichert JG: Linkage analysis for autism in a subset families with obsessive-compulsive behaviors: evidence for an autism susceptibility gene on chromosome 1 and further support for susceptibility genes on chromosome 6 and 19. Mol Psychiatry. 2004, 9: 144-150. 10.1038/sj.mp.4001465.CrossRefPubMed Buxbaum JD, Silverman J, Keddache M, Smith CJ, Hollander E, Ramoz N, Reichert JG: Linkage analysis for autism in a subset families with obsessive-compulsive behaviors: evidence for an autism susceptibility gene on chromosome 1 and further support for susceptibility genes on chromosome 6 and 19. Mol Psychiatry. 2004, 9: 144-150. 10.1038/sj.mp.4001465.CrossRefPubMed
36.
go back to reference Alarcon M, Cantor RM, Liu J, Gilliam TC, Geschwind DH: Evidence for a language quantitative trait locus on chromosome 7q in multiplex autism families. Am J Hum Genet. 2002, 70: 60-71. 10.1086/338241.PubMedCentralCrossRefPubMed Alarcon M, Cantor RM, Liu J, Gilliam TC, Geschwind DH: Evidence for a language quantitative trait locus on chromosome 7q in multiplex autism families. Am J Hum Genet. 2002, 70: 60-71. 10.1086/338241.PubMedCentralCrossRefPubMed
37.
go back to reference Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, Correia C, Abrahams BS, Sykes N, Pagnamenta AT, Almeida J, Bacchelli E, Bailey AJ, Baird G, Battaglia A, Berney T, Bolshakova N, Bölte S, Bolton PF, Bourgeron T, Brennan S, Brian J, Carson AR, Casallo G, Casey J, Chu SH, Cochrane L, Corsello C, Crawford EL, Crossett A: A genome-wide scan for common alleles affecting risk for autism. Hum Mol Genet. 2010, 19: 4072-4082. 10.1093/hmg/ddq307.PubMedCentralCrossRefPubMed Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, Correia C, Abrahams BS, Sykes N, Pagnamenta AT, Almeida J, Bacchelli E, Bailey AJ, Baird G, Battaglia A, Berney T, Bolshakova N, Bölte S, Bolton PF, Bourgeron T, Brennan S, Brian J, Carson AR, Casallo G, Casey J, Chu SH, Cochrane L, Corsello C, Crawford EL, Crossett A: A genome-wide scan for common alleles affecting risk for autism. Hum Mol Genet. 2010, 19: 4072-4082. 10.1093/hmg/ddq307.PubMedCentralCrossRefPubMed
38.
go back to reference Conciatori M, Stodgell CJ, Hyman SL, O'Bara M, Militerni R, Bravaccio C, Trillo S, Montecchi F, Schneider C, Melmed R, Elia M, Crawford L, Spence SJ, Muscarella L, Guarnieri V, D'Agruma L, Quattrone A, Zelante L, Rabinowitz D, Pascucci T, Puglisi-Allegra S, Reichelt KL, Rodier PM, Persico AM: Association between the HOXA1 A218G polymorphism and increased head circumference in patients with autism. Biol Psychiatry. 2004, 55: 413-419. 10.1016/j.biopsych.2003.10.005.CrossRefPubMed Conciatori M, Stodgell CJ, Hyman SL, O'Bara M, Militerni R, Bravaccio C, Trillo S, Montecchi F, Schneider C, Melmed R, Elia M, Crawford L, Spence SJ, Muscarella L, Guarnieri V, D'Agruma L, Quattrone A, Zelante L, Rabinowitz D, Pascucci T, Puglisi-Allegra S, Reichelt KL, Rodier PM, Persico AM: Association between the HOXA1 A218G polymorphism and increased head circumference in patients with autism. Biol Psychiatry. 2004, 55: 413-419. 10.1016/j.biopsych.2003.10.005.CrossRefPubMed
39.
go back to reference Ingram JL, Stodgell CJ, Hyman SL, Figlewicz DA, Weitkamp LR, Rodier PM: Discovery of allelic variants of HOXA1 and HOXB1: genetic susceptibility to autism spectrum disorders. Teratology. 2000, 62: 393-405. 10.1002/1096-9926(200012)62:6<393::AID-TERA6>3.0.CO;2-V.CrossRefPubMed Ingram JL, Stodgell CJ, Hyman SL, Figlewicz DA, Weitkamp LR, Rodier PM: Discovery of allelic variants of HOXA1 and HOXB1: genetic susceptibility to autism spectrum disorders. Teratology. 2000, 62: 393-405. 10.1002/1096-9926(200012)62:6<393::AID-TERA6>3.0.CO;2-V.CrossRefPubMed
40.
go back to reference Dutta S, Das S, Guhathakurta S, Sen B, Sinha S, Chatterjee A, Ghosh S, Ahmed S, Usha R: Glutamate receptor 6 gene (GluR6 or GRIK2) polymorphisms in the Indian population: a genetic association study on autism spectrum disorder. Cell Mol Neurobiol. 2007, 27: 1035-1047. 10.1007/s10571-007-9193-6.CrossRefPubMed Dutta S, Das S, Guhathakurta S, Sen B, Sinha S, Chatterjee A, Ghosh S, Ahmed S, Usha R: Glutamate receptor 6 gene (GluR6 or GRIK2) polymorphisms in the Indian population: a genetic association study on autism spectrum disorder. Cell Mol Neurobiol. 2007, 27: 1035-1047. 10.1007/s10571-007-9193-6.CrossRefPubMed
41.
go back to reference Kim SA, Kim JH, Park M, Cho IH, Yoo HJ: Family-based association study between GRIK2 polymorphisms and autism spectrum disorders in the Korean trios. Neurosci Res. 2007, 58: 332-335. 10.1016/j.neures.2007.03.002.CrossRefPubMed Kim SA, Kim JH, Park M, Cho IH, Yoo HJ: Family-based association study between GRIK2 polymorphisms and autism spectrum disorders in the Korean trios. Neurosci Res. 2007, 58: 332-335. 10.1016/j.neures.2007.03.002.CrossRefPubMed
42.
go back to reference Wang K, Zhang H, Ma D, Bucan M, Glessner JT, Abrahams BS, Salyakina D, Imielinski M, Bradfield JP, Sleiman PM, Kim CE, Hou C, Frackelton E, Chiavacci R, Takahashi N, Sakurai T, Rappaport E, Lajonchere CM, Munson J, Estes A, Korvatska O, Piven J, Sonnenblick LI, Alvarez Retuerto AI, Herman EI, Dong H, Hutman T, Sigman M, Ozonoff S, Klin A: Common genetic variants on 5p14.1 associate with autism spectrum disorders. Nature. 2009, 459: 528-533. 10.1038/nature07999.PubMedCentralCrossRefPubMed Wang K, Zhang H, Ma D, Bucan M, Glessner JT, Abrahams BS, Salyakina D, Imielinski M, Bradfield JP, Sleiman PM, Kim CE, Hou C, Frackelton E, Chiavacci R, Takahashi N, Sakurai T, Rappaport E, Lajonchere CM, Munson J, Estes A, Korvatska O, Piven J, Sonnenblick LI, Alvarez Retuerto AI, Herman EI, Dong H, Hutman T, Sigman M, Ozonoff S, Klin A: Common genetic variants on 5p14.1 associate with autism spectrum disorders. Nature. 2009, 459: 528-533. 10.1038/nature07999.PubMedCentralCrossRefPubMed
43.
go back to reference Coutinho AM, Sousa I, Martins M, Correia C, Morgadinho T, Bento C, Marques C, Ataíde A, Miguel TS, Moore JH, Oliveira G, Vicente AM: Evidence for epistasis between SLC6A4 and ITGB3 in autism etiology and in the determination of platelet serotonin levels. Hum Genet. 2007, 121: 243-256. 10.1007/s00439-006-0301-3.CrossRefPubMed Coutinho AM, Sousa I, Martins M, Correia C, Morgadinho T, Bento C, Marques C, Ataíde A, Miguel TS, Moore JH, Oliveira G, Vicente AM: Evidence for epistasis between SLC6A4 and ITGB3 in autism etiology and in the determination of platelet serotonin levels. Hum Genet. 2007, 121: 243-256. 10.1007/s00439-006-0301-3.CrossRefPubMed
44.
go back to reference Ma DQ, Rabionet R, Konidari I, Jaworski J, Cukier HN, Wright HH, Abramson RK, Gilbert JR, Cuccaro ML, Pericak-Vance MA, Martin ER: Association and gene-gene interaction of SLC6A4 and ITGB3 in autism. Am J Med Genet B Neuropsychiatr Genet. 2010, 153B: 477-483.PubMed Ma DQ, Rabionet R, Konidari I, Jaworski J, Cukier HN, Wright HH, Abramson RK, Gilbert JR, Cuccaro ML, Pericak-Vance MA, Martin ER: Association and gene-gene interaction of SLC6A4 and ITGB3 in autism. Am J Med Genet B Neuropsychiatr Genet. 2010, 153B: 477-483.PubMed
45.
go back to reference Napolioni V, Lombardi F, Sacco R, Curatolo P, Manzi B, Alessandrelli R, Militerni R, Bravaccio C, Lenti C, Saccani M, Schneider C, Melmed R, Pascucci T, Puglisi-Allegra S, Reichelt KL, Rousseau F, Lewin P, Persico AM: Family-based association study of ITGB3 in autism spectrum disorder and its endophenotypes. Eur J Hum Genet. 2011, 19: 353-359. 10.1038/ejhg.2010.180.PubMedCentralCrossRefPubMed Napolioni V, Lombardi F, Sacco R, Curatolo P, Manzi B, Alessandrelli R, Militerni R, Bravaccio C, Lenti C, Saccani M, Schneider C, Melmed R, Pascucci T, Puglisi-Allegra S, Reichelt KL, Rousseau F, Lewin P, Persico AM: Family-based association study of ITGB3 in autism spectrum disorder and its endophenotypes. Eur J Hum Genet. 2011, 19: 353-359. 10.1038/ejhg.2010.180.PubMedCentralCrossRefPubMed
46.
go back to reference Weiss LA, Kosova G, Delahanty RJ, Jiang L, Cook EH, Ober C, Sutcliffe JS: Variation in ITGB3 is associated with whole-blood serotonin level and autism susceptibility. Eur J Hum Genet. 2006, 14: 923-931. 10.1038/sj.ejhg.5201644.CrossRefPubMed Weiss LA, Kosova G, Delahanty RJ, Jiang L, Cook EH, Ober C, Sutcliffe JS: Variation in ITGB3 is associated with whole-blood serotonin level and autism susceptibility. Eur J Hum Genet. 2006, 14: 923-931. 10.1038/sj.ejhg.5201644.CrossRefPubMed
47.
go back to reference Maussion G, Carayol J, Lepagnol-Bestel AM, Tores F, Loe-Mie Y, Milbreta U, Rousseau F, Fontaine K, Renaud J, Moalic JM, Philippi A, Chedotal A, Gorwood P, Ramoz N, Hager J, Simonneau M: Convergent evidence identifying MAP/microtubule affinity-regulating kinase 1 (MARK1) as a susceptibility gene for autism. Hum Mol Genet. 2008, 17: 2541-2551. 10.1093/hmg/ddn154.CrossRefPubMed Maussion G, Carayol J, Lepagnol-Bestel AM, Tores F, Loe-Mie Y, Milbreta U, Rousseau F, Fontaine K, Renaud J, Moalic JM, Philippi A, Chedotal A, Gorwood P, Ramoz N, Hager J, Simonneau M: Convergent evidence identifying MAP/microtubule affinity-regulating kinase 1 (MARK1) as a susceptibility gene for autism. Hum Mol Genet. 2008, 17: 2541-2551. 10.1093/hmg/ddn154.CrossRefPubMed
48.
go back to reference Weiss LA, Arking DE, Daly MJ, Chakravarti A: A genome-wide linkage and association scan reveals novel loci for autism. Nature. 2009, 461: 802-808. 10.1038/nature08490.PubMedCentralCrossRefPubMed Weiss LA, Arking DE, Daly MJ, Chakravarti A: A genome-wide linkage and association scan reveals novel loci for autism. Nature. 2009, 461: 802-808. 10.1038/nature08490.PubMedCentralCrossRefPubMed
50.
go back to reference Lin X, Song K, Lim N, Yuan X, Johnson T, Abderrahmani A, Vollenweider P, Stirnadel H, Sundseth SS, Lai E, Burns DK, Middleton LT, Roses AD, Matthews PM, Waeber G, Cardon L, Waterworth DM, Mooser V: Risk prediction of prevalent diabetes in a Swiss population using a weighted genetic score--the CoLaus Study. Diabetologia. 2009, 52: 600-608. 10.1007/s00125-008-1254-y.CrossRefPubMed Lin X, Song K, Lim N, Yuan X, Johnson T, Abderrahmani A, Vollenweider P, Stirnadel H, Sundseth SS, Lai E, Burns DK, Middleton LT, Roses AD, Matthews PM, Waeber G, Cardon L, Waterworth DM, Mooser V: Risk prediction of prevalent diabetes in a Swiss population using a weighted genetic score--the CoLaus Study. Diabetologia. 2009, 52: 600-608. 10.1007/s00125-008-1254-y.CrossRefPubMed
51.
go back to reference Cordell HJ, Clayton DG: A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes. Am J Hum Genet. 2002, 70: 124-141. 10.1086/338007.PubMedCentralCrossRefPubMed Cordell HJ, Clayton DG: A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes. Am J Hum Genet. 2002, 70: 124-141. 10.1086/338007.PubMedCentralCrossRefPubMed
52.
go back to reference Cordell HJ: Properties of case/pseudocontrol analysis for genetic association studies: Effects of recombination, ascertainment, and multiple affected offspring. Genet Epidemiol. 2004, 26: 186-205. 10.1002/gepi.10306.CrossRefPubMed Cordell HJ: Properties of case/pseudocontrol analysis for genetic association studies: Effects of recombination, ascertainment, and multiple affected offspring. Genet Epidemiol. 2004, 26: 186-205. 10.1002/gepi.10306.CrossRefPubMed
53.
go back to reference Cordell HJ, Barratt BJ, Clayton DG: Case/pseudocontrol analysis in genetic association studies: A unified framework for detection of genotype and haplotype associations, gene-gene and gene-environment interactions, and parent-of-origin effects. Genet Epidemiol. 2004, 26: 167-185. 10.1002/gepi.10307.CrossRefPubMed Cordell HJ, Barratt BJ, Clayton DG: Case/pseudocontrol analysis in genetic association studies: A unified framework for detection of genotype and haplotype associations, gene-gene and gene-environment interactions, and parent-of-origin effects. Genet Epidemiol. 2004, 26: 167-185. 10.1002/gepi.10307.CrossRefPubMed
54.
go back to reference Carayol J, Tores F, Konig IR, Hager J, Ziegler A: Evaluating diagnostic accuracy of genetic profiles in affected offspring families. Stat Med. 2010, 29: 2359-2368. 10.1002/sim.4006.PubMedCentralCrossRefPubMed Carayol J, Tores F, Konig IR, Hager J, Ziegler A: Evaluating diagnostic accuracy of genetic profiles in affected offspring families. Stat Med. 2010, 29: 2359-2368. 10.1002/sim.4006.PubMedCentralCrossRefPubMed
55.
go back to reference Lepagnol-Bestel AM, Maussion G, Boda B, Cardona A, Iwayama Y, Delezoide AL, Moalic JM, Muller D, Dean B, Yoshikawa T, Gorwood P, Buxbaum JD, Ramoz N, Simonneau M: SLC25A12 expression is associated with neurite outgrowth and is upregulated in the prefrontal cortex of autistic subjects. Mol Psychiatry. 2008, 13: 385-397. 10.1038/sj.mp.4002120.CrossRefPubMed Lepagnol-Bestel AM, Maussion G, Boda B, Cardona A, Iwayama Y, Delezoide AL, Moalic JM, Muller D, Dean B, Yoshikawa T, Gorwood P, Buxbaum JD, Ramoz N, Simonneau M: SLC25A12 expression is associated with neurite outgrowth and is upregulated in the prefrontal cortex of autistic subjects. Mol Psychiatry. 2008, 13: 385-397. 10.1038/sj.mp.4002120.CrossRefPubMed
56.
go back to reference Ramoz N, Reichert JG, Smith CJ, Silverman JM, Bespalova IN, Davis KL, Buxbaum JD: Linkage and association of the mitochondrial aspartate/glutamate carrier SLC25A12 gene with autism. Am J Psychiatry. 2004, 161: 662-669. 10.1176/appi.ajp.161.4.662.CrossRefPubMed Ramoz N, Reichert JG, Smith CJ, Silverman JM, Bespalova IN, Davis KL, Buxbaum JD: Linkage and association of the mitochondrial aspartate/glutamate carrier SLC25A12 gene with autism. Am J Psychiatry. 2004, 161: 662-669. 10.1176/appi.ajp.161.4.662.CrossRefPubMed
57.
go back to reference Segurado R, Conroy J, Meally E, Fitzgerald M, Gill M, Gallagher L: Confirmation of association between autism and the mitochondrial aspartate/glutamate carrier SLC25A12 gene on chromosome 2q31. Am J Psychiatry. 2005, 162: 2182-2184. 10.1176/appi.ajp.162.11.2182.CrossRefPubMed Segurado R, Conroy J, Meally E, Fitzgerald M, Gill M, Gallagher L: Confirmation of association between autism and the mitochondrial aspartate/glutamate carrier SLC25A12 gene on chromosome 2q31. Am J Psychiatry. 2005, 162: 2182-2184. 10.1176/appi.ajp.162.11.2182.CrossRefPubMed
58.
go back to reference Silverman JM, Buxbaum JD, Ramoz N, Schmeidler J, Reichenberg A, Hollander E, Angelo G, Smith CJ, Kryzak LA: Autism-related routines and rituals associated with a mitochondrial aspartate/glutamate carrier SLC25A12 polymorphism. Am J Med Genet B Neuropsychiatr Genet. 2008, 147: 408-410.CrossRefPubMed Silverman JM, Buxbaum JD, Ramoz N, Schmeidler J, Reichenberg A, Hollander E, Angelo G, Smith CJ, Kryzak LA: Autism-related routines and rituals associated with a mitochondrial aspartate/glutamate carrier SLC25A12 polymorphism. Am J Med Genet B Neuropsychiatr Genet. 2008, 147: 408-410.CrossRefPubMed
59.
go back to reference Jakobsdottir J, Gorin MB, Conley YP, Ferrell RE, Weeks DE: Interpretation of genetic association studies: markers with replicated highly significant odds ratios may be poor classifiers. PLoS Genet. 2009, 5: e1000337-10.1371/journal.pgen.1000337.PubMedCentralCrossRefPubMed Jakobsdottir J, Gorin MB, Conley YP, Ferrell RE, Weeks DE: Interpretation of genetic association studies: markers with replicated highly significant odds ratios may be poor classifiers. PLoS Genet. 2009, 5: e1000337-10.1371/journal.pgen.1000337.PubMedCentralCrossRefPubMed
60.
go back to reference De Jager PL, Chibnik LB, Cui J, Reischl J, Lehr S, Simon KC, Aubin C, Bauer D, Heubach JF, Sandbrink R, Tyblova M, Lelkova P, Steering committee of the BENEFIT study; Steering committee of the BEYOND study; Steering committee of the LTF study, Steering committee of the CCR1 study, Havrdova E, Pohl C, Horakova D, Ascherio A, Hafler DA, Karlson EW: Integration of genetic risk factors into a clinical algorithm for multiple sclerosis susceptibility: a weighted genetic risk score. Lancet Neurol. 2009, 8: 1111-1119. 10.1016/S1474-4422(09)70275-3.PubMedCentralCrossRefPubMed De Jager PL, Chibnik LB, Cui J, Reischl J, Lehr S, Simon KC, Aubin C, Bauer D, Heubach JF, Sandbrink R, Tyblova M, Lelkova P, Steering committee of the BENEFIT study; Steering committee of the BEYOND study; Steering committee of the LTF study, Steering committee of the CCR1 study, Havrdova E, Pohl C, Horakova D, Ascherio A, Hafler DA, Karlson EW: Integration of genetic risk factors into a clinical algorithm for multiple sclerosis susceptibility: a weighted genetic risk score. Lancet Neurol. 2009, 8: 1111-1119. 10.1016/S1474-4422(09)70275-3.PubMedCentralCrossRefPubMed
61.
go back to reference Manolio TA: Genomewide association studies and assessment of the risk of disease. N Engl J Med. 2010, 363: 166-176. 10.1056/NEJMra0905980.CrossRefPubMed Manolio TA: Genomewide association studies and assessment of the risk of disease. N Engl J Med. 2010, 363: 166-176. 10.1056/NEJMra0905980.CrossRefPubMed
62.
go back to reference Le-Niculescu H, Patel SD, Bhat M, Kuczenski R, Faraone SV, Tsuang MT, McMahon FJ, Schork NJ, Nurnberger JI, Niculescu AB: Convergent functional genomics of genome-wide association data for bipolar disorder: comprehensive identification of candidate genes, pathways and mechanisms. Am J Med Genet B Neuropsychiatr Genet. 2009, 150B: 155-181. 10.1002/ajmg.b.30887.CrossRefPubMed Le-Niculescu H, Patel SD, Bhat M, Kuczenski R, Faraone SV, Tsuang MT, McMahon FJ, Schork NJ, Nurnberger JI, Niculescu AB: Convergent functional genomics of genome-wide association data for bipolar disorder: comprehensive identification of candidate genes, pathways and mechanisms. Am J Med Genet B Neuropsychiatr Genet. 2009, 150B: 155-181. 10.1002/ajmg.b.30887.CrossRefPubMed
63.
go back to reference Patel SD, Le-Niculescu H, Koller DL, Green SD, Lahiri DK, McMahon FJ, Nurnberger JI, Niculescu AB: Coming to grips with complex disorders: genetic risk prediction in bipolar disorder using panels of genes identified through convergent functional genomics. Am J Med Genet B Neuropsychiatr Genet. 2010, 153B: 850-877.PubMed Patel SD, Le-Niculescu H, Koller DL, Green SD, Lahiri DK, McMahon FJ, Nurnberger JI, Niculescu AB: Coming to grips with complex disorders: genetic risk prediction in bipolar disorder using panels of genes identified through convergent functional genomics. Am J Med Genet B Neuropsychiatr Genet. 2010, 153B: 850-877.PubMed
64.
go back to reference Lu AT, Cantor RM: Allowing for sex differences increases power in a GWAS of multiplex Autism families. Mol Psychiatry. 2010 Lu AT, Cantor RM: Allowing for sex differences increases power in a GWAS of multiplex Autism families. Mol Psychiatry. 2010
65.
Metadata
Title
Autism risk assessment in siblings of affected children using sex-specific genetic scores
Authors
Jerome Carayol
Gerard D Schellenberg
Beth Dombroski
Emmanuelle Genin
Francis Rousseau
Geraldine Dawson
Publication date
01-12-2011
Publisher
BioMed Central
Published in
Molecular Autism / Issue 1/2011
Electronic ISSN: 2040-2392
DOI
https://doi.org/10.1186/2040-2392-2-17

Other articles of this Issue 1/2011

Molecular Autism 1/2011 Go to the issue