Skip to main content
Top
Published in: Molecular Cancer 1/2014

Open Access 01-12-2014 | Research

GAS5 long non-coding RNA in malignant pleural mesothelioma

Authors: Arun Renganathan, Jelena Kresoja-Rakic, Nohemy Echeverry, Gabriela Ziltener, Bart Vrugt, Isabelle Opitz, Rolf A Stahel, Emanuela Felley-Bosco

Published in: Molecular Cancer | Issue 1/2014

Login to get access

Abstract

Background

Malignant pleural mesothelioma (MPM) is an aggressive cancer with short overall survival. Long non-coding RNAs (lncRNA) are a class of RNAs more than 200 nucleotides long that do not code for protein and are part of the 90% of the human genome that is transcribed. Earlier experimental studies in mice showed GAS5 (growth arrest specific transcript 5) gene deletion in asbestos driven mesothelioma. GAS5 encodes for a lncRNA whose function is not well known, but it has been shown to act as glucocorticoid receptor decoy and microRNA “sponge”. Our aim was to investigate the possible role of the GAS5 in the growth of MPM.

Methods

Primary MPM cultures grown in serum-free condition in 3% oxygen or MPM cell lines grown in serum-containing medium were used to investigate the modulation of GAS5 by growth arrest after inhibition of Hedgehog or PI3K/mTOR signalling. Cell cycle length was determined by EdU incorporation assay in doxycycline inducible short hairpinGAS5 clones generated from ZL55SPT cells. Gene expression was quantified by quantitative PCR. To investigate the GAS5 promoter, a 0.77 kb sequence was inserted into a pGL3 reporter vector and luciferase activity was determined after transfection into MPM cells. Localization of GAS5 lncRNA was identified by in situ hybridization. To characterize cells expressing GAS5, expression of podoplanin and Ki-67 was assessed by immunohistochemistry.

Results

GAS5 expression was lower in MPM cell lines compared to normal mesothelial cells. GAS5 was upregulated upon growth arrest induced by inhibition of Hedgehog and PI3K/mTOR signalling in in vitro MPM models. The increase in GAS5 lncRNA was accompanied by increased promoter activity. Silencing of GAS5 increased the expression of glucocorticoid responsive genes glucocorticoid inducible leucine-zipper and serum/glucocorticoid-regulated kinase-1 and shortened the length of the cell cycle. Drug induced growth arrest was associated with GAS5 accumulation in the nuclei. GAS5 was abundant in tumoral quiescent cells and it was correlated to podoplanin expression.

Conclusions

The observations that GAS5 levels modify cell proliferation in vitro, and that GAS5 expression in MPM tissue is associated with cell quiescence and podoplanin expression support a role of GAS5 in MPM biology.
Appendix
Available only for authorised users
Literature
1.
go back to reference Tsao AS, Wistuba I, Roth JA, Kindler HL: Malignant pleural mesothelioma. J Clin Oncol. 2009, 27: 2081-2090. 10.1200/JCO.2008.19.8523.CrossRefPubMed Tsao AS, Wistuba I, Roth JA, Kindler HL: Malignant pleural mesothelioma. J Clin Oncol. 2009, 27: 2081-2090. 10.1200/JCO.2008.19.8523.CrossRefPubMed
2.
go back to reference Stahel RA, Weder W, Felip E: Malignant pleural mesothelioma: ESMO clinical recommendations for diagnosis, treatment and follow-up. Ann Oncol. 2009, 20 (Suppl 4): 73-75.PubMed Stahel RA, Weder W, Felip E: Malignant pleural mesothelioma: ESMO clinical recommendations for diagnosis, treatment and follow-up. Ann Oncol. 2009, 20 (Suppl 4): 73-75.PubMed
3.
go back to reference Vogelzang NJ, Rusthoven JJ, Symanowski J, Denham C, Kaukel E, Ruffie P, Gatzemeier U, Boyer M, Emri S, Manegold C, Niyikiza C, Paoletti P: Phase III study of pemetrexed in combination with cisplatin versus cisplatin alone in patients with malignant pleural mesothelioma. J Clin Oncol. 2003, 21: 2636-2644. 10.1200/JCO.2003.11.136.CrossRefPubMed Vogelzang NJ, Rusthoven JJ, Symanowski J, Denham C, Kaukel E, Ruffie P, Gatzemeier U, Boyer M, Emri S, Manegold C, Niyikiza C, Paoletti P: Phase III study of pemetrexed in combination with cisplatin versus cisplatin alone in patients with malignant pleural mesothelioma. J Clin Oncol. 2003, 21: 2636-2644. 10.1200/JCO.2003.11.136.CrossRefPubMed
4.
go back to reference Jean D, Daubriac J, Le Pimpec-Barthes F, Galateau-Salle F, Jaurand MC: Molecular changes in mesothelioma with an impact on prognosis and treatment. Arch Pathol Lab Med. 2012, 136: 277-293. 10.5858/arpa.2011-0215-RA.CrossRefPubMed Jean D, Daubriac J, Le Pimpec-Barthes F, Galateau-Salle F, Jaurand MC: Molecular changes in mesothelioma with an impact on prognosis and treatment. Arch Pathol Lab Med. 2012, 136: 277-293. 10.5858/arpa.2011-0215-RA.CrossRefPubMed
5.
go back to reference Wright CM, Kirschner MB, Cheng YY, O’Byrne KJ, Gray SG, Schelch K, Hoda MA, Klebe S, McCaughan B, van Zandwijk N, Reid G: Long non coding RNAs (lncRNAs) are dysregulated in malignant pleural mesothelioma (MPM). PLoS One. 2013, 8: e70940-10.1371/journal.pone.0070940.PubMedCentralCrossRefPubMed Wright CM, Kirschner MB, Cheng YY, O’Byrne KJ, Gray SG, Schelch K, Hoda MA, Klebe S, McCaughan B, van Zandwijk N, Reid G: Long non coding RNAs (lncRNAs) are dysregulated in malignant pleural mesothelioma (MPM). PLoS One. 2013, 8: e70940-10.1371/journal.pone.0070940.PubMedCentralCrossRefPubMed
6.
go back to reference Kapranov P, Willingham AT, Gingeras TR: Genome-wide transcription and the implications for genomic organization. Nat Rev Genet. 2007, 8: 413-423. 10.1038/nrg2083.CrossRefPubMed Kapranov P, Willingham AT, Gingeras TR: Genome-wide transcription and the implications for genomic organization. Nat Rev Genet. 2007, 8: 413-423. 10.1038/nrg2083.CrossRefPubMed
7.
go back to reference Saxena A, Carninci P: Whole transcriptome analysis: what are we still missing?. Wiley Interdiscip Rev Syst Biol Med. 2011, 3: 527-543.CrossRefPubMed Saxena A, Carninci P: Whole transcriptome analysis: what are we still missing?. Wiley Interdiscip Rev Syst Biol Med. 2011, 3: 527-543.CrossRefPubMed
8.
go back to reference Saxena A, Carninci P: Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs. Bioessays. 2011, 33: 830-839. 10.1002/bies.201100084.PubMedCentralCrossRefPubMed Saxena A, Carninci P: Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs. Bioessays. 2011, 33: 830-839. 10.1002/bies.201100084.PubMedCentralCrossRefPubMed
9.
go back to reference Wapinski O, Chang HY: Long noncoding RNAs and human disease. Trends Cell Biol. 2011, 21: 354-361. 10.1016/j.tcb.2011.04.001.CrossRefPubMed Wapinski O, Chang HY: Long noncoding RNAs and human disease. Trends Cell Biol. 2011, 21: 354-361. 10.1016/j.tcb.2011.04.001.CrossRefPubMed
10.
12.
go back to reference Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigo R: The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Genome Res. 2012, 22: 1775-1789. 10.1101/gr.132159.111.PubMedCentralCrossRefPubMed Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigo R: The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Genome Res. 2012, 22: 1775-1789. 10.1101/gr.132159.111.PubMedCentralCrossRefPubMed
13.
go back to reference Bernstein BE, Birney E, Dunham I, Green ED, Gunter C, Snyder M: An integrated encyclopedia of DNA elements in the human genome. Nature. 2012, 489: 57-74. 10.1038/nature11247.CrossRef Bernstein BE, Birney E, Dunham I, Green ED, Gunter C, Snyder M: An integrated encyclopedia of DNA elements in the human genome. Nature. 2012, 489: 57-74. 10.1038/nature11247.CrossRef
14.
16.
go back to reference Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, Wang Y, Brzoska P, Kong B, Li R, West RB, van de Vijver MJ, Sukumar S, Chang HY: Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 2010, 464: 1071-1076. 10.1038/nature08975.PubMedCentralCrossRefPubMed Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, Wang Y, Brzoska P, Kong B, Li R, West RB, van de Vijver MJ, Sukumar S, Chang HY: Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 2010, 464: 1071-1076. 10.1038/nature08975.PubMedCentralCrossRefPubMed
17.
go back to reference Jean D, Thomas E, Manie E, Renier A, de Reynies A, Lecomte C, Andujar P, Fleury-Feith J, Galateau-Salle F, Giovannini M, Zucman-Rossi J, Stern MH, Jaurand MC: Syntenic relationships between genomic profiles of fiber-induced murine and human malignant mesothelioma. Am J Pathol. 2011, 178: 881-894. 10.1016/j.ajpath.2010.10.039.PubMedCentralCrossRefPubMed Jean D, Thomas E, Manie E, Renier A, de Reynies A, Lecomte C, Andujar P, Fleury-Feith J, Galateau-Salle F, Giovannini M, Zucman-Rossi J, Stern MH, Jaurand MC: Syntenic relationships between genomic profiles of fiber-induced murine and human malignant mesothelioma. Am J Pathol. 2011, 178: 881-894. 10.1016/j.ajpath.2010.10.039.PubMedCentralCrossRefPubMed
18.
go back to reference Smith CM, Steitz JA: Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5′-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. Mol Cell Biol. 1998, 18: 6897-6909.PubMedCentralCrossRefPubMed Smith CM, Steitz JA: Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5′-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. Mol Cell Biol. 1998, 18: 6897-6909.PubMedCentralCrossRefPubMed
19.
go back to reference Schneider C, King RM, Philipson L: Genes specifically expressed at growth arrest of mammalian cells. Cell. 1988, 54: 787-793. 10.1016/S0092-8674(88)91065-3.CrossRefPubMed Schneider C, King RM, Philipson L: Genes specifically expressed at growth arrest of mammalian cells. Cell. 1988, 54: 787-793. 10.1016/S0092-8674(88)91065-3.CrossRefPubMed
20.
go back to reference Mourtada-Maarabouni M, Hedge VL, Kirkham L, Farzaneh F, Williams GT: Growth arrest in human T-cells is controlled by the non-coding RNA growth-arrest-specific transcript 5 (GAS5). J Cell Sci. 2008, 121: 939-946. 10.1242/jcs.024646.CrossRefPubMed Mourtada-Maarabouni M, Hedge VL, Kirkham L, Farzaneh F, Williams GT: Growth arrest in human T-cells is controlled by the non-coding RNA growth-arrest-specific transcript 5 (GAS5). J Cell Sci. 2008, 121: 939-946. 10.1242/jcs.024646.CrossRefPubMed
21.
go back to reference Mourtada-Maarabouni M, Hasan AM, Farzaneh F, Williams GT: Inhibition of human T-cell proliferation by mammalian target of rapamycin (mTOR) antagonists requires noncoding RNA growth-arrest-specific transcript 5 (GAS5). Mol Pharmacol. 2010, 78: 19-28. 10.1124/mol.110.064055.PubMedCentralCrossRefPubMed Mourtada-Maarabouni M, Hasan AM, Farzaneh F, Williams GT: Inhibition of human T-cell proliferation by mammalian target of rapamycin (mTOR) antagonists requires noncoding RNA growth-arrest-specific transcript 5 (GAS5). Mol Pharmacol. 2010, 78: 19-28. 10.1124/mol.110.064055.PubMedCentralCrossRefPubMed
22.
go back to reference Kino T, Hurt DE, Ichijo T, Nader N, Chrousos GP: Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor. Sci Signal. 2010, 3: ra8-PubMedCentralPubMed Kino T, Hurt DE, Ichijo T, Nader N, Chrousos GP: Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor. Sci Signal. 2010, 3: ra8-PubMedCentralPubMed
23.
go back to reference Zhang Z, Zhu Z, Watabe K, Zhang X, Bai C, Xu M, Wu F, Mo YY: Negative regulation of lncRNA GAS5 by miR-21. Cell Death Differ. 2013, 20: 1558-1568. 10.1038/cdd.2013.110.PubMedCentralCrossRefPubMed Zhang Z, Zhu Z, Watabe K, Zhang X, Bai C, Xu M, Wu F, Mo YY: Negative regulation of lncRNA GAS5 by miR-21. Cell Death Differ. 2013, 20: 1558-1568. 10.1038/cdd.2013.110.PubMedCentralCrossRefPubMed
24.
go back to reference Gibb EA, Vucic EA, Enfield KS, Stewart GL, Lonergan KM, Kennett JY, Becker-Santos DD, MacAulay CE, Lam S, Brown CJ, Lam WL: Human cancer long non-coding RNA transcriptomes. PLoS One. 2011, 6: e25915-10.1371/journal.pone.0025915.PubMedCentralCrossRefPubMed Gibb EA, Vucic EA, Enfield KS, Stewart GL, Lonergan KM, Kennett JY, Becker-Santos DD, MacAulay CE, Lam S, Brown CJ, Lam WL: Human cancer long non-coding RNA transcriptomes. PLoS One. 2011, 6: e25915-10.1371/journal.pone.0025915.PubMedCentralCrossRefPubMed
25.
go back to reference Shi Y, Moura U, Opitz I, Soltermann A, Rehrauer H, Thies S, Weder W, Stahel RA, Felley-Bosco E: Role of hedgehog signaling in malignant pleural mesothelioma. Clin Cancer Res. 2012, 18: 4646-4656. 10.1158/1078-0432.CCR-12-0599.CrossRefPubMed Shi Y, Moura U, Opitz I, Soltermann A, Rehrauer H, Thies S, Weder W, Stahel RA, Felley-Bosco E: Role of hedgehog signaling in malignant pleural mesothelioma. Clin Cancer Res. 2012, 18: 4646-4656. 10.1158/1078-0432.CCR-12-0599.CrossRefPubMed
26.
go back to reference Fischer B, Frei C, Moura U, Stahel R, Felley-Bosco E: Inhibition of phosphoinositide-3 kinase pathway down regulates ABCG2 function and sensitizes malignant pleural mesothelioma to chemotherapy. Lung Cancer. 2012, 78: 23-29. 10.1016/j.lungcan.2012.07.005.CrossRefPubMed Fischer B, Frei C, Moura U, Stahel R, Felley-Bosco E: Inhibition of phosphoinositide-3 kinase pathway down regulates ABCG2 function and sensitizes malignant pleural mesothelioma to chemotherapy. Lung Cancer. 2012, 78: 23-29. 10.1016/j.lungcan.2012.07.005.CrossRefPubMed
27.
go back to reference Ellis BC, Graham LD, Molloy PL: CRNDE, a long non-coding RNA responsive to insulin/IGF signaling, regulates genes involved in central metabolism. Biochim Biophys Acta. 2014, 1843: 372-386. 10.1016/j.bbamcr.2013.10.016.CrossRefPubMed Ellis BC, Graham LD, Molloy PL: CRNDE, a long non-coding RNA responsive to insulin/IGF signaling, regulates genes involved in central metabolism. Biochim Biophys Acta. 2014, 1843: 372-386. 10.1016/j.bbamcr.2013.10.016.CrossRefPubMed
28.
go back to reference Connell ND, Rheinwald JG: Regulation of the cytoskeleton in mesothelial cells: reversible loss of keratin and increase in vimentin during rapid growth in culture. Cell. 1983, 34: 245-253. 10.1016/0092-8674(83)90155-1.CrossRefPubMed Connell ND, Rheinwald JG: Regulation of the cytoskeleton in mesothelial cells: reversible loss of keratin and increase in vimentin during rapid growth in culture. Cell. 1983, 34: 245-253. 10.1016/0092-8674(83)90155-1.CrossRefPubMed
29.
go back to reference Cohet N, Stewart KM, Mudhasani R, Asirvatham AJ, Mallappa C, Imbalzano KM, Weaver VM, Imbalzano AN, Nickerson JA: SWI/SNF chromatin remodeling enzyme ATPases promote cell proliferation in normal mammary epithelial cells. J Cell Physiol. 2010, 223: 667-678.PubMedCentralPubMed Cohet N, Stewart KM, Mudhasani R, Asirvatham AJ, Mallappa C, Imbalzano KM, Weaver VM, Imbalzano AN, Nickerson JA: SWI/SNF chromatin remodeling enzyme ATPases promote cell proliferation in normal mammary epithelial cells. J Cell Physiol. 2010, 223: 667-678.PubMedCentralPubMed
30.
go back to reference Sidi R, Pasello G, Opitz I, Soltermann A, Tutic M, Rehrauer H, Weder W, Stahel RA, Felley-Bosco E: Induction of senescence markers after neo-adjuvant chemotherapy of malignant pleural mesothelioma and association with clinical outcome: an exploratory analysis. Eur J Cancer. 2011, 47: 326-332. 10.1016/j.ejca.2010.09.044.CrossRefPubMed Sidi R, Pasello G, Opitz I, Soltermann A, Tutic M, Rehrauer H, Weder W, Stahel RA, Felley-Bosco E: Induction of senescence markers after neo-adjuvant chemotherapy of malignant pleural mesothelioma and association with clinical outcome: an exploratory analysis. Eur J Cancer. 2011, 47: 326-332. 10.1016/j.ejca.2010.09.044.CrossRefPubMed
31.
go back to reference Aoki K, Adachi S, Homoto M, Kusano H, Koike K, Natsume T: LARP1 specifically recognizes the 3′ terminus of poly(A) mRNA. FEBS Lett. 2013, 587: 2173-2178. 10.1016/j.febslet.2013.05.035.CrossRefPubMed Aoki K, Adachi S, Homoto M, Kusano H, Koike K, Natsume T: LARP1 specifically recognizes the 3′ terminus of poly(A) mRNA. FEBS Lett. 2013, 587: 2173-2178. 10.1016/j.febslet.2013.05.035.CrossRefPubMed
32.
go back to reference Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010, 18: 675-685. 10.1016/j.devcel.2010.02.012.CrossRefPubMed Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010, 18: 675-685. 10.1016/j.devcel.2010.02.012.CrossRefPubMed
33.
go back to reference Kohler PO, Bridson WE, Rayford PL: Cortisol stimulation of growth hormone production by monkey adenohypophysis in tissue culture. Biochem Biophys Res Commun. 1968, 33: 834-840. 10.1016/0006-291X(68)90236-2.CrossRefPubMed Kohler PO, Bridson WE, Rayford PL: Cortisol stimulation of growth hormone production by monkey adenohypophysis in tissue culture. Biochem Biophys Res Commun. 1968, 33: 834-840. 10.1016/0006-291X(68)90236-2.CrossRefPubMed
34.
go back to reference Bridson WE, Kohler PO: Cortisol stimulation of growth hormone production by human pituitary tissue in culture. J Clin Endocrinol Metab. 1970, 30: 538-540. 10.1210/jcem-30-4-538.CrossRefPubMed Bridson WE, Kohler PO: Cortisol stimulation of growth hormone production by human pituitary tissue in culture. J Clin Endocrinol Metab. 1970, 30: 538-540. 10.1210/jcem-30-4-538.CrossRefPubMed
35.
go back to reference Bloomfield CD, Smith KA, Peterson BA, Munck A: Glucocorticoid receptors in adult acute lymphoblastic leukemia. Cancer Res. 1981, 41: 4857-4860.PubMed Bloomfield CD, Smith KA, Peterson BA, Munck A: Glucocorticoid receptors in adult acute lymphoblastic leukemia. Cancer Res. 1981, 41: 4857-4860.PubMed
36.
go back to reference Schottelius A, Wedel S, Weltrich R, Rohde W, Buttgereit F, Schreiber S, Lochs H: Higher expression of glucocorticoid receptor in peripheral mononuclear cells in inflammatory bowel disease. Am J Gastroenterol. 2000, 95: 1994-1999. 10.1111/j.1572-0241.2000.02188.x.CrossRefPubMed Schottelius A, Wedel S, Weltrich R, Rohde W, Buttgereit F, Schreiber S, Lochs H: Higher expression of glucocorticoid receptor in peripheral mononuclear cells in inflammatory bowel disease. Am J Gastroenterol. 2000, 95: 1994-1999. 10.1111/j.1572-0241.2000.02188.x.CrossRefPubMed
37.
go back to reference Catts VS, Farnsworth ML, Haber M, Norris MD, Lutze-Mann LH, Lock RB: High level resistance to glucocorticoids, associated with a dysfunctional glucocorticoid receptor, in childhood acute lymphoblastic leukemia cells selected for methotrexate resistance. Leukemia. 2001, 15: 929-935. 10.1038/sj.leu.2402128.CrossRefPubMed Catts VS, Farnsworth ML, Haber M, Norris MD, Lutze-Mann LH, Lock RB: High level resistance to glucocorticoids, associated with a dysfunctional glucocorticoid receptor, in childhood acute lymphoblastic leukemia cells selected for methotrexate resistance. Leukemia. 2001, 15: 929-935. 10.1038/sj.leu.2402128.CrossRefPubMed
38.
go back to reference Marguerat S, Schmidt A, Codlin S, Chen W, Aebersold R, Bahler J: Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells. Cell. 2012, 151: 671-683. 10.1016/j.cell.2012.09.019.PubMedCentralCrossRefPubMed Marguerat S, Schmidt A, Codlin S, Chen W, Aebersold R, Bahler J: Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells. Cell. 2012, 151: 671-683. 10.1016/j.cell.2012.09.019.PubMedCentralCrossRefPubMed
39.
go back to reference Tripathi V, Shen Z, Chakraborty A, Giri S, Freier SM, Wu X, Zhang Y, Gorospe M, Prasanth SG, Lal A, Prasanth KV: Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB. PLoS Genet. 2013, 9: e1003368-10.1371/journal.pgen.1003368.PubMedCentralCrossRefPubMed Tripathi V, Shen Z, Chakraborty A, Giri S, Freier SM, Wu X, Zhang Y, Gorospe M, Prasanth SG, Lal A, Prasanth KV: Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB. PLoS Genet. 2013, 9: e1003368-10.1371/journal.pgen.1003368.PubMedCentralCrossRefPubMed
40.
go back to reference Yang F, Yi F, Han X, Du Q, Liang Z: MALAT-1 interacts with hnRNP C in cell cycle regulation. FEBS Lett. 2013, 587: 3175-3181. 10.1016/j.febslet.2013.07.048.CrossRefPubMed Yang F, Yi F, Han X, Du Q, Liang Z: MALAT-1 interacts with hnRNP C in cell cycle regulation. FEBS Lett. 2013, 587: 3175-3181. 10.1016/j.febslet.2013.07.048.CrossRefPubMed
41.
go back to reference Mourtada-Maarabouni M, Pickard MR, Hedge VL, Farzaneh F, Williams GT: GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer. Oncogene. 2009, 28: 195-208. 10.1038/onc.2008.373.CrossRefPubMed Mourtada-Maarabouni M, Pickard MR, Hedge VL, Farzaneh F, Williams GT: GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer. Oncogene. 2009, 28: 195-208. 10.1038/onc.2008.373.CrossRefPubMed
42.
go back to reference Liu Z, Wang W, Jiang J, Bao E, Xu D, Zeng Y, Tao L, Qiu J: Downregulation of GAS5 promotes bladder cancer cell proliferation, partly by regulating CDK6. PLoS One. 2013, 8: e73991-10.1371/journal.pone.0073991.PubMedCentralCrossRefPubMed Liu Z, Wang W, Jiang J, Bao E, Xu D, Zeng Y, Tao L, Qiu J: Downregulation of GAS5 promotes bladder cancer cell proliferation, partly by regulating CDK6. PLoS One. 2013, 8: e73991-10.1371/journal.pone.0073991.PubMedCentralCrossRefPubMed
43.
go back to reference Lu X, Fang Y, Wang Z, Xie J, Zhan Q, Deng X, Chen H, Jin J, Peng C, Li H, Shen B: Downregulation of gas5 increases pancreatic cancer cell proliferation by regulating CDK6. Cell Tissue Res. 2013, 354: 891-896. 10.1007/s00441-013-1711-x.CrossRefPubMed Lu X, Fang Y, Wang Z, Xie J, Zhan Q, Deng X, Chen H, Jin J, Peng C, Li H, Shen B: Downregulation of gas5 increases pancreatic cancer cell proliferation by regulating CDK6. Cell Tissue Res. 2013, 354: 891-896. 10.1007/s00441-013-1711-x.CrossRefPubMed
44.
go back to reference Hruz T, Laule O, Szabo G, Wessendorp F, Bleuler S, Oertle L, Widmayer P, Gruissem W, Zimmermann P: Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes. Adv Bioinformatics. 2008, 2008: 420747-PubMedCentralCrossRefPubMed Hruz T, Laule O, Szabo G, Wessendorp F, Bleuler S, Oertle L, Widmayer P, Gruissem W, Zimmermann P: Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes. Adv Bioinformatics. 2008, 2008: 420747-PubMedCentralCrossRefPubMed
45.
go back to reference Kimura N, Kimura I: Podoplanin as a marker for mesothelioma. Pathol Int. 2005, 55: 83-86. 10.1111/j.1440-1827.2005.01791.x.CrossRefPubMed Kimura N, Kimura I: Podoplanin as a marker for mesothelioma. Pathol Int. 2005, 55: 83-86. 10.1111/j.1440-1827.2005.01791.x.CrossRefPubMed
46.
47.
go back to reference Cortez MA, Nicoloso MS, Shimizu M, Rossi S, Gopisetty G, Molina JR, Carlotti C, Tirapelli D, Neder L, Brassesco MS, Scrideli CA, Tone LG, Georgescu MM, Zhang W, Puduvalli V, Calin GA: miR-29b and miR-125a regulate podoplanin and suppress invasion in glioblastoma. Genes Chromosomes Cancer. 2010, 49: 981-990. 10.1002/gcc.20808.CrossRefPubMed Cortez MA, Nicoloso MS, Shimizu M, Rossi S, Gopisetty G, Molina JR, Carlotti C, Tirapelli D, Neder L, Brassesco MS, Scrideli CA, Tone LG, Georgescu MM, Zhang W, Puduvalli V, Calin GA: miR-29b and miR-125a regulate podoplanin and suppress invasion in glioblastoma. Genes Chromosomes Cancer. 2010, 49: 981-990. 10.1002/gcc.20808.CrossRefPubMed
49.
go back to reference Frei C, Opitz I, Soltermann A, Fischer B, Moura U, Rehrauer H, Weder W, Stahel R, Felley-Bosco E: Pleural mesothelioma side populations have a precursor phenotype. Carcinogenesis. 2011, 32: 1324-1332. 10.1093/carcin/bgr127.CrossRefPubMed Frei C, Opitz I, Soltermann A, Fischer B, Moura U, Rehrauer H, Weder W, Stahel R, Felley-Bosco E: Pleural mesothelioma side populations have a precursor phenotype. Carcinogenesis. 2011, 32: 1324-1332. 10.1093/carcin/bgr127.CrossRefPubMed
50.
go back to reference Schmitter D, Lauber B, Fagg B, Stahel RA: Hematopoietic growth factors secreted by seven human pleural mesothelioma cell lines: interleukin-6 production as a common feature. Int J Cancer. 1992, 51: 296-301. 10.1002/ijc.2910510220.CrossRefPubMed Schmitter D, Lauber B, Fagg B, Stahel RA: Hematopoietic growth factors secreted by seven human pleural mesothelioma cell lines: interleukin-6 production as a common feature. Int J Cancer. 1992, 51: 296-301. 10.1002/ijc.2910510220.CrossRefPubMed
51.
go back to reference Thurneysen C, Opitz I, Kurtz S, Weder W, Stahel RA, Felley-Bosco E: Functional inactivation of NF2/merlin in human mesothelioma. Lung Cancer. 2009, 64: 140-147. 10.1016/j.lungcan.2008.08.014.CrossRefPubMed Thurneysen C, Opitz I, Kurtz S, Weder W, Stahel RA, Felley-Bosco E: Functional inactivation of NF2/merlin in human mesothelioma. Lung Cancer. 2009, 64: 140-147. 10.1016/j.lungcan.2008.08.014.CrossRefPubMed
52.
go back to reference Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, Mueller R, Nolan T, Pfaffl MW, Shipley GL, Vandesompele J, Wittwer CT: The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem. 2009, 55: 611-622. 10.1373/clinchem.2008.112797.CrossRefPubMed Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, Mueller R, Nolan T, Pfaffl MW, Shipley GL, Vandesompele J, Wittwer CT: The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem. 2009, 55: 611-622. 10.1373/clinchem.2008.112797.CrossRefPubMed
53.
go back to reference Knobel PA, Kotov IN, Felley-Bosco E, Stahel RA, Marti TM: Inhibition of REV3 expression induces persistent DNA damage and growth arrest in cancer cells. Neoplasia. 2011, 13: 961-970.PubMedCentralCrossRefPubMed Knobel PA, Kotov IN, Felley-Bosco E, Stahel RA, Marti TM: Inhibition of REV3 expression induces persistent DNA damage and growth arrest in cancer cells. Neoplasia. 2011, 13: 961-970.PubMedCentralCrossRefPubMed
54.
go back to reference Jordan CT, Yamasaki G, Minamoto D: High-resolution cell cycle analysis of defined phenotypic subsets within primitive human hematopoietic cell populations. Exp Hematol. 1996, 24: 1347-1355.PubMed Jordan CT, Yamasaki G, Minamoto D: High-resolution cell cycle analysis of defined phenotypic subsets within primitive human hematopoietic cell populations. Exp Hematol. 1996, 24: 1347-1355.PubMed
Metadata
Title
GAS5 long non-coding RNA in malignant pleural mesothelioma
Authors
Arun Renganathan
Jelena Kresoja-Rakic
Nohemy Echeverry
Gabriela Ziltener
Bart Vrugt
Isabelle Opitz
Rolf A Stahel
Emanuela Felley-Bosco
Publication date
01-12-2014
Publisher
BioMed Central
Published in
Molecular Cancer / Issue 1/2014
Electronic ISSN: 1476-4598
DOI
https://doi.org/10.1186/1476-4598-13-119

Other articles of this Issue 1/2014

Molecular Cancer 1/2014 Go to the issue
Webinar | 19-02-2024 | 17:30 (CET)

Keynote webinar | Spotlight on antibody–drug conjugates in cancer

Antibody–drug conjugates (ADCs) are novel agents that have shown promise across multiple tumor types. Explore the current landscape of ADCs in breast and lung cancer with our experts, and gain insights into the mechanism of action, key clinical trials data, existing challenges, and future directions.

Dr. Véronique Diéras
Prof. Fabrice Barlesi
Developed by: Springer Medicine