Skip to main content
Top
Published in: BMC Medical Genetics 1/2010

Open Access 01-12-2010 | Research article

Prevalence and novelty of PRPF31 mutations in French autosomal dominant rod-cone dystrophy patients and a review of published reports

Authors: Isabelle Audo, Kinga Bujakowska, Saddek Mohand-Saïd, Marie-Elise Lancelot, Veselina Moskova-Doumanova, Naushin H Waseem, Aline Antonio, José-Alain Sahel, Shomi S Bhattacharya, Christina Zeitz

Published in: BMC Medical Genetics | Issue 1/2010

Login to get access

Abstract

Background

Rod-cone dystrophies are heterogeneous group of inherited retinal disorders both clinically and genetically characterized by photoreceptor degeneration. The mode of inheritance can be autosomal dominant, autosomal recessive or X-linked. The purpose of this study was to identify mutations in one of the genes, PRPF31, in French patients with autosomal dominant RP, to perform genotype-phenotype correlations of those patients, to determine the prevalence of PRPF31 mutations in this cohort and to review previously identified PRPF31 mutations from other cohorts.

Methods

Detailed phenotypic characterization was performed including precise family history, best corrected visual acuity using the ETDRS chart, slit lamp examination, kinetic and static perimetry, full field and multifocal ERG, fundus autofluorescence imaging and optic coherence tomography. For genetic diagnosis, genomic DNA of ninety families was isolated by standard methods. The coding exons and flanking intronic regions of PRPF31 were PCR amplified, purified and sequenced in the index patient.

Results

We showed for the first time that 6.7% cases of a French adRP cohort have a PRPF31 mutation. We identified in total six mutations, which were all novel and not detected in ethnically matched controls. The mutation spectrum from our cohort comprises frameshift and splice site mutations. Co-segregation analysis in available family members revealed that each index patient and all affected family members showed a heterozygous mutation. In five families incomplete penetrance was observed. Most patients showed classical signs of RP with relatively preserved central vision and visual field.

Conclusion

Our studies extended the mutation spectrum of PRPF31 and as previously reported in other populations, it is a major cause of adRP in France.
Appendix
Available only for authorised users
Literature
1.
go back to reference Birch DG, Fish GE: Rod ERGs in retinitis pigmentosa and cone-rod degeneration. Invest Ophthalmol Vis Sci. 1987, 28: 140-150.PubMed Birch DG, Fish GE: Rod ERGs in retinitis pigmentosa and cone-rod degeneration. Invest Ophthalmol Vis Sci. 1987, 28: 140-150.PubMed
2.
go back to reference Carter-Dawson LD, LaVail MM, Sidman RL: Differential effect of the rd mutation on rods and cones in the mouse retina. Invest Ophthalmol Vis Sci. 1978, 17: 489-498.PubMed Carter-Dawson LD, LaVail MM, Sidman RL: Differential effect of the rd mutation on rods and cones in the mouse retina. Invest Ophthalmol Vis Sci. 1978, 17: 489-498.PubMed
3.
go back to reference Cideciyan AV, Hood DC, Huang Y, Banin E, Li ZY, Stone EM, Milam AH, Jacobson SG: Disease sequence from mutant rhodopsin allele to rod and cone photoreceptor degeneration in man. Proc Natl Acad Sci USA. 1998, 95: 7103-7108. 10.1073/pnas.95.12.7103.CrossRefPubMedPubMedCentral Cideciyan AV, Hood DC, Huang Y, Banin E, Li ZY, Stone EM, Milam AH, Jacobson SG: Disease sequence from mutant rhodopsin allele to rod and cone photoreceptor degeneration in man. Proc Natl Acad Sci USA. 1998, 95: 7103-7108. 10.1073/pnas.95.12.7103.CrossRefPubMedPubMedCentral
4.
go back to reference Milam AH, Li ZY, Fariss RN: Histopathology of the human retina in retinitis pigmentosa. Prog Retin Eye Res. 1998, 17: 175-205. 10.1016/S1350-9462(97)00012-8.CrossRefPubMed Milam AH, Li ZY, Fariss RN: Histopathology of the human retina in retinitis pigmentosa. Prog Retin Eye Res. 1998, 17: 175-205. 10.1016/S1350-9462(97)00012-8.CrossRefPubMed
5.
go back to reference Hartong DT, Berson EL, Dryja TP: Retinitis pigmentosa. Lancet. 2006, 368: 1795-1809. 10.1016/S0140-6736(06)69740-7.CrossRefPubMed Hartong DT, Berson EL, Dryja TP: Retinitis pigmentosa. Lancet. 2006, 368: 1795-1809. 10.1016/S0140-6736(06)69740-7.CrossRefPubMed
6.
go back to reference Audo I, Manes G, Mohand-Said S, Friedrich A, Lancelot ME, Antonio A, Moskova-Doumanova V, Poch O, Zanlonghi X, Hamel CP, et al: Spectrum of rhodopsin mutations in French autosomal dominant rod-cone dystrophy patients. Invest Ophthalmol Vis Sci. 2010, 51: 3687-3700. 10.1167/iovs.09-4766.CrossRefPubMedPubMedCentral Audo I, Manes G, Mohand-Said S, Friedrich A, Lancelot ME, Antonio A, Moskova-Doumanova V, Poch O, Zanlonghi X, Hamel CP, et al: Spectrum of rhodopsin mutations in French autosomal dominant rod-cone dystrophy patients. Invest Ophthalmol Vis Sci. 2010, 51: 3687-3700. 10.1167/iovs.09-4766.CrossRefPubMedPubMedCentral
7.
go back to reference Vithana EN, Abu-Safieh L, Allen MJ, Carey A, Papaioannou M, Chakarova C, Al-Maghtheh M, Ebenezer ND, Willis C, Moore AT, et al: A human homolog of yeast pre-mRNA splicing gene, PRP31, underlies autosomal dominant retinitis pigmentosa on chromosome 19q13.4 (RP11). Mol Cell. 2001, 8: 375-381. 10.1016/S1097-2765(01)00305-7.CrossRefPubMed Vithana EN, Abu-Safieh L, Allen MJ, Carey A, Papaioannou M, Chakarova C, Al-Maghtheh M, Ebenezer ND, Willis C, Moore AT, et al: A human homolog of yeast pre-mRNA splicing gene, PRP31, underlies autosomal dominant retinitis pigmentosa on chromosome 19q13.4 (RP11). Mol Cell. 2001, 8: 375-381. 10.1016/S1097-2765(01)00305-7.CrossRefPubMed
8.
go back to reference Daiger SP, Bowne SJ, Sullivan LS: Perspective on genes and mutations causing retinitis pigmentosa. Arch Ophthalmol. 2007, 125: 151-158. 10.1001/archopht.125.2.151.CrossRefPubMedPubMedCentral Daiger SP, Bowne SJ, Sullivan LS: Perspective on genes and mutations causing retinitis pigmentosa. Arch Ophthalmol. 2007, 125: 151-158. 10.1001/archopht.125.2.151.CrossRefPubMedPubMedCentral
9.
go back to reference Gandra M, Anandula V, Authiappan V, Sundaramurthy S, Raman R, Bhattacharya S, Govindasamy K: Retinitis pigmentosa: mutation analysis of RHO, PRPF31, RP1, and IMPDH1 genes in patients from India. Mol Vis. 2008, 14: 1105-1113.PubMedPubMedCentral Gandra M, Anandula V, Authiappan V, Sundaramurthy S, Raman R, Bhattacharya S, Govindasamy K: Retinitis pigmentosa: mutation analysis of RHO, PRPF31, RP1, and IMPDH1 genes in patients from India. Mol Vis. 2008, 14: 1105-1113.PubMedPubMedCentral
10.
go back to reference Lim KP, Yip SP, Cheung SC, Leung KW, Lam ST, To CH: Novel PRPF31 and PRPH2 mutations and co-occurrence of PRPF31 and RHO mutations in Chinese patients with retinitis pigmentosa. Arch Ophthalmol. 2009, 127: 784-790. 10.1001/archophthalmol.2009.112.CrossRefPubMed Lim KP, Yip SP, Cheung SC, Leung KW, Lam ST, To CH: Novel PRPF31 and PRPH2 mutations and co-occurrence of PRPF31 and RHO mutations in Chinese patients with retinitis pigmentosa. Arch Ophthalmol. 2009, 127: 784-790. 10.1001/archophthalmol.2009.112.CrossRefPubMed
11.
go back to reference Martinez-Gimeno M, Gamundi MJ, Hernan I, Maseras M, Milla E, Ayuso C, Garcia-Sandoval B, Beneyto M, Vilela C, Baiget M, et al: Mutations in the pre-mRNA splicing-factor genes PRPF3, PRPF8, and PRPF31 in Spanish families with autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2003, 44: 2171-2177. 10.1167/iovs.02-0871.CrossRefPubMed Martinez-Gimeno M, Gamundi MJ, Hernan I, Maseras M, Milla E, Ayuso C, Garcia-Sandoval B, Beneyto M, Vilela C, Baiget M, et al: Mutations in the pre-mRNA splicing-factor genes PRPF3, PRPF8, and PRPF31 in Spanish families with autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2003, 44: 2171-2177. 10.1167/iovs.02-0871.CrossRefPubMed
12.
go back to reference Sato H, Wada Y, Itabashi T, Nakamura M, Kawamura M, Tamai M: Mutations in the pre-mRNA splicing gene, PRPF31, in Japanese families with autosomal dominant retinitis pigmentosa. Am J Ophthalmol. 2005, 140: 537-540. 10.1016/j.ajo.2005.02.050.CrossRefPubMed Sato H, Wada Y, Itabashi T, Nakamura M, Kawamura M, Tamai M: Mutations in the pre-mRNA splicing gene, PRPF31, in Japanese families with autosomal dominant retinitis pigmentosa. Am J Ophthalmol. 2005, 140: 537-540. 10.1016/j.ajo.2005.02.050.CrossRefPubMed
13.
go back to reference Sullivan LS, Bowne SJ, Birch DG, Hughbanks-Wheaton D, Heckenlively JR, Lewis RA, Garcia CA, Ruiz RS, Blanton SH, Northrup H, et al: Prevalence of disease-causing mutations in families with autosomal dominant retinitis pigmentosa: a screen of known genes in 200 families. Invest Ophthalmol Vis Sci. 2006, 47: 3052-3064. 10.1167/iovs.05-1443.CrossRefPubMedPubMedCentral Sullivan LS, Bowne SJ, Birch DG, Hughbanks-Wheaton D, Heckenlively JR, Lewis RA, Garcia CA, Ruiz RS, Blanton SH, Northrup H, et al: Prevalence of disease-causing mutations in families with autosomal dominant retinitis pigmentosa: a screen of known genes in 200 families. Invest Ophthalmol Vis Sci. 2006, 47: 3052-3064. 10.1167/iovs.05-1443.CrossRefPubMedPubMedCentral
14.
go back to reference Sullivan LS, Bowne SJ, Seaman CR, Blanton SH, Lewis RA, Heckenlively JR, Birch DG, Hughbanks-Wheaton D, Daiger SP: Genomic rearrangements of the PRPF31 gene account for 2.5% of autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2006, 47: 4579-4588. 10.1167/iovs.06-0440.CrossRefPubMedPubMedCentral Sullivan LS, Bowne SJ, Seaman CR, Blanton SH, Lewis RA, Heckenlively JR, Birch DG, Hughbanks-Wheaton D, Daiger SP: Genomic rearrangements of the PRPF31 gene account for 2.5% of autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2006, 47: 4579-4588. 10.1167/iovs.06-0440.CrossRefPubMedPubMedCentral
15.
go back to reference Waseem NH, Vaclavik V, Webster A, Jenkins SA, Bird AC, Bhattacharya SS: Mutations in the gene coding for the pre-mRNA splicing factor, PRPF31, in patients with autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2007, 48: 1330-1334. 10.1167/iovs.06-0963.CrossRefPubMed Waseem NH, Vaclavik V, Webster A, Jenkins SA, Bird AC, Bhattacharya SS: Mutations in the gene coding for the pre-mRNA splicing factor, PRPF31, in patients with autosomal dominant retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2007, 48: 1330-1334. 10.1167/iovs.06-0963.CrossRefPubMed
16.
go back to reference Al-Maghtheh M, Vithana E, Tarttelin E, Jay M, Evans K, Moore T, Bhattacharya S, Inglehearn CF: Evidence for a major retinitis pigmentosa locus on 19q13.4 (RP11) and association with a unique bimodal expressivity phenotype. Am J Hum Genet. 1996, 59: 864-871.PubMedPubMedCentral Al-Maghtheh M, Vithana E, Tarttelin E, Jay M, Evans K, Moore T, Bhattacharya S, Inglehearn CF: Evidence for a major retinitis pigmentosa locus on 19q13.4 (RP11) and association with a unique bimodal expressivity phenotype. Am J Hum Genet. 1996, 59: 864-871.PubMedPubMedCentral
17.
go back to reference Evans K, al-Maghtheh M, Fitzke FW, Moore AT, Jay M, Inglehearn CF, Arden GB, Bird AC: Bimodal expressivity in dominant retinitis pigmentosa genetically linked to chromosome 19q. Br J Ophthalmol. 1995, 79: 841-846. 10.1136/bjo.79.9.841.CrossRefPubMedPubMedCentral Evans K, al-Maghtheh M, Fitzke FW, Moore AT, Jay M, Inglehearn CF, Arden GB, Bird AC: Bimodal expressivity in dominant retinitis pigmentosa genetically linked to chromosome 19q. Br J Ophthalmol. 1995, 79: 841-846. 10.1136/bjo.79.9.841.CrossRefPubMedPubMedCentral
18.
go back to reference McGee TL, Devoto M, Ott J, Berson EL, Dryja TP: Evidence that the penetrance of mutations at the RP11 locus causing dominant retinitis pigmentosa is influenced by a gene linked to the homologous RP11 allele. Am J Hum Genet. 1997, 61: 1059-1066. 10.1086/301614.CrossRefPubMedPubMedCentral McGee TL, Devoto M, Ott J, Berson EL, Dryja TP: Evidence that the penetrance of mutations at the RP11 locus causing dominant retinitis pigmentosa is influenced by a gene linked to the homologous RP11 allele. Am J Hum Genet. 1997, 61: 1059-1066. 10.1086/301614.CrossRefPubMedPubMedCentral
19.
go back to reference Rio Frio T, McGee TL, Wade NM, Iseli C, Beckmann JS, Berson EL, Rivolta C: A single-base substitution within an intronic repetitive element causes dominant retinitis pigmentosa with reduced penetrance. Hum Mutat. 2009, 30: 1340-1347. 10.1002/humu.21071.CrossRefPubMedPubMedCentral Rio Frio T, McGee TL, Wade NM, Iseli C, Beckmann JS, Berson EL, Rivolta C: A single-base substitution within an intronic repetitive element causes dominant retinitis pigmentosa with reduced penetrance. Hum Mutat. 2009, 30: 1340-1347. 10.1002/humu.21071.CrossRefPubMedPubMedCentral
20.
go back to reference Rio Frio T, Wade NM, Ransijn A, Berson EL, Beckmann JS, Rivolta C: Premature termination codons in PRPF31 cause retinitis pigmentosa via haploinsufficiency due to nonsense-mediated mRNA decay. J Clin Invest. 2008, 118: 1519-1531. 10.1172/JCI34211.CrossRefPubMedPubMedCentral Rio Frio T, Wade NM, Ransijn A, Berson EL, Beckmann JS, Rivolta C: Premature termination codons in PRPF31 cause retinitis pigmentosa via haploinsufficiency due to nonsense-mediated mRNA decay. J Clin Invest. 2008, 118: 1519-1531. 10.1172/JCI34211.CrossRefPubMedPubMedCentral
21.
go back to reference Vithana EN, Abu-Safieh L, Pelosini L, Winchester E, Hornan D, Bird AC, Hunt DM, Bustin SA, Bhattacharya SS: Expression of PRPF31 mRNA in patients with autosomal dominant retinitis pigmentosa: a molecular clue for incomplete penetrance?. Invest Ophthalmol Vis Sci. 2003, 44: 4204-4209. 10.1167/iovs.03-0253.CrossRefPubMed Vithana EN, Abu-Safieh L, Pelosini L, Winchester E, Hornan D, Bird AC, Hunt DM, Bustin SA, Bhattacharya SS: Expression of PRPF31 mRNA in patients with autosomal dominant retinitis pigmentosa: a molecular clue for incomplete penetrance?. Invest Ophthalmol Vis Sci. 2003, 44: 4204-4209. 10.1167/iovs.03-0253.CrossRefPubMed
22.
go back to reference Wang L, Ribaudo M, Zhao K, Yu N, Chen Q, Sun Q, Wang L, Wang Q: Novel deletion in the pre-mRNA splicing gene PRPF31 causes autosomal dominant retinitis pigmentosa in a large Chinese family. Am J Med Genet A. 2003, 121A: 235-239. 10.1002/ajmg.a.20224.CrossRefPubMed Wang L, Ribaudo M, Zhao K, Yu N, Chen Q, Sun Q, Wang L, Wang Q: Novel deletion in the pre-mRNA splicing gene PRPF31 causes autosomal dominant retinitis pigmentosa in a large Chinese family. Am J Med Genet A. 2003, 121A: 235-239. 10.1002/ajmg.a.20224.CrossRefPubMed
23.
go back to reference Rivolta C, McGee TL, Rio Frio T, Jensen RV, Berson EL, Dryja TP: Variation in retinitis pigmentosa-11 (PRPF31 or RP11) gene expression between symptomatic and asymptomatic patients with dominant RP11 mutations. Hum Mutat. 2006, 27: 644-653. 10.1002/humu.20325.CrossRefPubMed Rivolta C, McGee TL, Rio Frio T, Jensen RV, Berson EL, Dryja TP: Variation in retinitis pigmentosa-11 (PRPF31 or RP11) gene expression between symptomatic and asymptomatic patients with dominant RP11 mutations. Hum Mutat. 2006, 27: 644-653. 10.1002/humu.20325.CrossRefPubMed
24.
go back to reference Bujakowska KM, Maubaret C, Chakarova CF, Tanimoto N, Beck SC, Fahl E, Humphries MM, Kenna P, Makarov E, Makarova O, Paquet-Durand F, Ekström PA, van Veen T, Leveillard T, Humphries P, Seeliger MW, Bhattacharya SS: Study of gene targeted mouse models of splicing factor gene Prpf31 implicated in human autosomal dominant retinitis pigmentosa (RP). Invest Ophthalmol Vis Sci. 2009, 50: 5927-5933. 10.1167/iovs.08-3275.CrossRefPubMed Bujakowska KM, Maubaret C, Chakarova CF, Tanimoto N, Beck SC, Fahl E, Humphries MM, Kenna P, Makarov E, Makarova O, Paquet-Durand F, Ekström PA, van Veen T, Leveillard T, Humphries P, Seeliger MW, Bhattacharya SS: Study of gene targeted mouse models of splicing factor gene Prpf31 implicated in human autosomal dominant retinitis pigmentosa (RP). Invest Ophthalmol Vis Sci. 2009, 50: 5927-5933. 10.1167/iovs.08-3275.CrossRefPubMed
25.
go back to reference Huranova M, Hnilicova J, Fleischer B, Cvackova Z, Stanek D: A mutation linked to retinitis pigmentosa in HPRP31 causes protein instability and impairs its interactions with spliceosomal snRNPs. Hum Mol Genet. 2009, 18: 2014-2023. 10.1093/hmg/ddp125.CrossRefPubMed Huranova M, Hnilicova J, Fleischer B, Cvackova Z, Stanek D: A mutation linked to retinitis pigmentosa in HPRP31 causes protein instability and impairs its interactions with spliceosomal snRNPs. Hum Mol Genet. 2009, 18: 2014-2023. 10.1093/hmg/ddp125.CrossRefPubMed
26.
go back to reference Yuan L, Kawada M, Havlioglu N, Tang H, Wu JY: Mutations in PRPF31 inhibit pre-mRNA splicing of rhodopsin gene and cause apoptosis of retinal cells. J Neurosci. 2005, 25: 748-757. 10.1523/JNEUROSCI.2399-04.2005.CrossRefPubMedPubMedCentral Yuan L, Kawada M, Havlioglu N, Tang H, Wu JY: Mutations in PRPF31 inhibit pre-mRNA splicing of rhodopsin gene and cause apoptosis of retinal cells. J Neurosci. 2005, 25: 748-757. 10.1523/JNEUROSCI.2399-04.2005.CrossRefPubMedPubMedCentral
27.
go back to reference Liu JY, Dai X, Sheng J, et al: Identification and functional characterization of a novel splicing mutation in RP gene PRPF31. Biochem Biophys Res Commun. 2008, 367: 420-426. 10.1016/j.bbrc.2007.12.156.CrossRefPubMedPubMedCentral Liu JY, Dai X, Sheng J, et al: Identification and functional characterization of a novel splicing mutation in RP gene PRPF31. Biochem Biophys Res Commun. 2008, 367: 420-426. 10.1016/j.bbrc.2007.12.156.CrossRefPubMedPubMedCentral
28.
go back to reference Xia K, Zheng D, Pan Q, et al: A novel PRPF31 splice-site mutation in a Chinese family with autosomal dominant retinitis pigmentosa. Mol Vis. 2004, 367 (10): 361-365. Xia K, Zheng D, Pan Q, et al: A novel PRPF31 splice-site mutation in a Chinese family with autosomal dominant retinitis pigmentosa. Mol Vis. 2004, 367 (10): 361-365.
29.
go back to reference Chakarova CF, Cherninkova S, Tournev I, et al: Molecular genetics of retinitis pigmentosa in two Romani (Gypsy) families. Mol Vis. 2006, 12: 909-914.PubMed Chakarova CF, Cherninkova S, Tournev I, et al: Molecular genetics of retinitis pigmentosa in two Romani (Gypsy) families. Mol Vis. 2006, 12: 909-914.PubMed
30.
go back to reference Kohn L, Bowne SJ, Sullivan LS, et al: Breakpoint characterization of a novel approximately 59 kb genomic deletion on 19q13.42 in autosomal-dominant retinitis pigmentosa with incomplete penetrance. Eur J Hum Genet. 2009, 17: 651-655. 10.1038/ejhg.2008.223.CrossRefPubMed Kohn L, Bowne SJ, Sullivan LS, et al: Breakpoint characterization of a novel approximately 59 kb genomic deletion on 19q13.42 in autosomal-dominant retinitis pigmentosa with incomplete penetrance. Eur J Hum Genet. 2009, 17: 651-655. 10.1038/ejhg.2008.223.CrossRefPubMed
31.
go back to reference Abu-Safieh L, Vithan EN, Mantel I, et al: A large deletion in the adRP gene PRPF31: evidence that haploinsufficiency is the cause of disease. Mol Vis. 2006, 12: 384-388.PubMed Abu-Safieh L, Vithan EN, Mantel I, et al: A large deletion in the adRP gene PRPF31: evidence that haploinsufficiency is the cause of disease. Mol Vis. 2006, 12: 384-388.PubMed
Metadata
Title
Prevalence and novelty of PRPF31 mutations in French autosomal dominant rod-cone dystrophy patients and a review of published reports
Authors
Isabelle Audo
Kinga Bujakowska
Saddek Mohand-Saïd
Marie-Elise Lancelot
Veselina Moskova-Doumanova
Naushin H Waseem
Aline Antonio
José-Alain Sahel
Shomi S Bhattacharya
Christina Zeitz
Publication date
01-12-2010
Publisher
BioMed Central
Published in
BMC Medical Genetics / Issue 1/2010
Electronic ISSN: 1471-2350
DOI
https://doi.org/10.1186/1471-2350-11-145

Other articles of this Issue 1/2010

BMC Medical Genetics 1/2010 Go to the issue