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Published in: European Journal of Medical Research 1/2016

Open Access 01-12-2016 | Research

Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region

Authors: Thaís Fenz Araujo, Erlane Marques Ribeiro, Anderson Pontes Arruda, Carolina Araujo Moreno, Paula Frassinetti Vasconcelos de Medeiros, Renata Moldenhauer Minillo, Débora Gusmão Melo, Chong Ae Kim, Maria Juliana Rodovalho Doriqui, Têmis Maria Felix, Rodrigo Ambrosio Fock, Denise Pontes Cavalcanti

Published in: European Journal of Medical Research | Issue 1/2016

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Abstract

Background

Pycnodysostosis is an autosomal recessive skeletal dysplasia, the prevalence of which is estimated to be low (1 per million). Nevertheless, in recent years we have found 27 affected individuals from 22 families in Ceará State, a region of the Brazilian Northeast, giving a local prevalence of 3 per million. This local prevalence associated with a high parental consanguinity, suggesting a possible founder effect, prompted us to perform a molecular investigation of these families to test this hypothesis.

Methods

The CTSK gene was sequenced by the Sanger method in the patients and their parents. In addition to 18 families from Ceará, this study also included 15 families from other Brazilian regions. We also investigated the origin of each family from the birthplace of the parents and/or grandparents.

Results

We have studied 39 patients, including 33 probands and 6 sibs, from 33 families with pycnodysostosis and identified six mutations, five previously described (c.436G>C, c.580G>A, c.721C>T, c.830C>T and c.953G>A) and one novel frameshift (c.83dupT). This frameshift variant seems to have a single origin in Ceará State, since the haplotype study using the polymorphic markers D1S2344, D1S442, D1S498 and D1S2715 suggested a common origin. Most of the mutations were found in homozygosity in the patients from Ceará (83.3 %) while in other states the mutations were found in homozygosity in half of patients. We have also shown that most of the families currently living outside of Ceará have northeastern ancestors, suggesting a dispersion of these mutations from the Brazilian Northeast.

Conclusions

The high frequency of pycnodysostosis in Ceará State is the consequence of the high inbreeding in that region. Several mutations, probably introduced a long time ago in Ceará, must have spread due to consanguineous marriages and internal population migration. However, the novel mutation seems to have a single origin in Ceará, suggestive of a founder effect.
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Literature
1.
go back to reference Bonafé L, Cormier-Daire V, Hall C, Lachman R, Mortier G, Mundlos S, Nishimura G, Sangiorgi L, Savarirayan R, Sillence D, Spranger J. Nosology and classification of genetic skeletal disorders: 2015 revision. Am J Med Genet Part A. 2015;9999A:1–24. Bonafé L, Cormier-Daire V, Hall C, Lachman R, Mortier G, Mundlos S, Nishimura G, Sangiorgi L, Savarirayan R, Sillence D, Spranger J. Nosology and classification of genetic skeletal disorders: 2015 revision. Am J Med Genet Part A. 2015;9999A:1–24.
2.
go back to reference Xue Y, Cai T, Shi S, Wang W, Zhang Y, Mao T, Duan X. Clinical and animal research findings in pycnodysostosis and gene mutations of cathepsin K from 1996 to 2011. Orphanet J Rare Dis. 2011;6:20.CrossRefPubMedPubMedCentral Xue Y, Cai T, Shi S, Wang W, Zhang Y, Mao T, Duan X. Clinical and animal research findings in pycnodysostosis and gene mutations of cathepsin K from 1996 to 2011. Orphanet J Rare Dis. 2011;6:20.CrossRefPubMedPubMedCentral
3.
go back to reference Motyckova G, Fisher DE. Pycnodysostosis: role and regulation of cathepsin K in osteoclast function and human disease. Curr Mol Med. 2002;2:407–21.CrossRefPubMed Motyckova G, Fisher DE. Pycnodysostosis: role and regulation of cathepsin K in osteoclast function and human disease. Curr Mol Med. 2002;2:407–21.CrossRefPubMed
4.
go back to reference Alves N, Cantín M. Clinical and radiographic maxillofacial features of pycnodysostosis. Int J Clin Exp Med. 2014;7:492–6.PubMedPubMedCentral Alves N, Cantín M. Clinical and radiographic maxillofacial features of pycnodysostosis. Int J Clin Exp Med. 2014;7:492–6.PubMedPubMedCentral
5.
go back to reference Testani E, Scarano E, Leoni C, Dittoni S, Losurdo A, Colicchio S, Gnoni V, Vollono C, Zampino G, Paludetti G, Della Marca G. Upper airway surgery of obstructive sleep apnea in pycnodysostosis: case report and literature review. Am J Med Genet A. 2014;164:2029–35.CrossRef Testani E, Scarano E, Leoni C, Dittoni S, Losurdo A, Colicchio S, Gnoni V, Vollono C, Zampino G, Paludetti G, Della Marca G. Upper airway surgery of obstructive sleep apnea in pycnodysostosis: case report and literature review. Am J Med Genet A. 2014;164:2029–35.CrossRef
6.
go back to reference Gelb B, Shi G, Chapman H, Desnick R. Pycnodysostosis, a lysosomal disease caused by cathepsin K deficiency. Science. 1996;273:1236–8.CrossRefPubMed Gelb B, Shi G, Chapman H, Desnick R. Pycnodysostosis, a lysosomal disease caused by cathepsin K deficiency. Science. 1996;273:1236–8.CrossRefPubMed
7.
go back to reference Gelb B, Willner J, Dunn T. Paternal uniparental disomy for chromosome 1 revealed by molecular analysis of a patient with pycnodysostosis. Am J Hum Genet. 1998;62:848–54.CrossRefPubMedPubMedCentral Gelb B, Willner J, Dunn T. Paternal uniparental disomy for chromosome 1 revealed by molecular analysis of a patient with pycnodysostosis. Am J Hum Genet. 1998;62:848–54.CrossRefPubMedPubMedCentral
8.
go back to reference Hou WS, Brömme D, Zhao Y, Mehler E, Dushey C, Weinstein H, Miranda CS, Fraga C, Greig F, Carey J, Rimoin DL, Desnick RJ, Gelb BD. Characterization of novel cathepsin K mutations in the pro and mature polypeptide regions causing pycnodysostosis. J Clin Invest. 1999;103:731–8.CrossRefPubMedPubMedCentral Hou WS, Brömme D, Zhao Y, Mehler E, Dushey C, Weinstein H, Miranda CS, Fraga C, Greig F, Carey J, Rimoin DL, Desnick RJ, Gelb BD. Characterization of novel cathepsin K mutations in the pro and mature polypeptide regions causing pycnodysostosis. J Clin Invest. 1999;103:731–8.CrossRefPubMedPubMedCentral
9.
go back to reference Nishi Y, Atley L, Eyre DE, Edelson JG, Superti-Furga A, Yasud T, Desnick RJ, Gelb BD. Determination of bone markers in pycnodysostosis: effects of cathepsin K deficiency on bone matrix degradation. J Bone Miner Res. 1999;14:1902–8.CrossRefPubMed Nishi Y, Atley L, Eyre DE, Edelson JG, Superti-Furga A, Yasud T, Desnick RJ, Gelb BD. Determination of bone markers in pycnodysostosis: effects of cathepsin K deficiency on bone matrix degradation. J Bone Miner Res. 1999;14:1902–8.CrossRefPubMed
10.
go back to reference Fujita Y, Nakata K, Yasui N, Matsui Y, Kataoka E, Hiroshima K, Shiba RI, Ochi T. Novel mutations of the cathepsin K gene in patients with pycnodysostosis and their characterization. J Clin Endocrinol Metab. 2000;85:425–31.CrossRefPubMed Fujita Y, Nakata K, Yasui N, Matsui Y, Kataoka E, Hiroshima K, Shiba RI, Ochi T. Novel mutations of the cathepsin K gene in patients with pycnodysostosis and their characterization. J Clin Endocrinol Metab. 2000;85:425–31.CrossRefPubMed
11.
go back to reference Haagerup A, Hertz JM, Christensen MF, Binderup H, Kruse TA. Cathepsin K gene mutations and 1q21 haplotypes in at patients with pycnodysostosis in an outbred population. Eur J Hum Genet. 2000;8:431–6.CrossRefPubMed Haagerup A, Hertz JM, Christensen MF, Binderup H, Kruse TA. Cathepsin K gene mutations and 1q21 haplotypes in at patients with pycnodysostosis in an outbred population. Eur J Hum Genet. 2000;8:431–6.CrossRefPubMed
12.
go back to reference Fratzl-Zelman N, Valenta A, Roschger P, Nader A, Gelb BD, Fratzl P, Klaushofer K. Decreased bone turnover and deterioration of bone structure in two cases of pycnodysostosis. J Clin Endocrinol Metab. 2004;89:1538–47.CrossRefPubMed Fratzl-Zelman N, Valenta A, Roschger P, Nader A, Gelb BD, Fratzl P, Klaushofer K. Decreased bone turnover and deterioration of bone structure in two cases of pycnodysostosis. J Clin Endocrinol Metab. 2004;89:1538–47.CrossRefPubMed
13.
go back to reference Donnarumma M, Regis S, Tappino B, Rosano C, Assereto S, Corsolini F, Di Rocco M, Filocamo M. Molecular analysis and characterization of nine novel CTSK mutations in twelve patients affected by pycnodysostosis. Mutation in brief #961. Online. Hum Mutat. 2007;28:524.CrossRefPubMed Donnarumma M, Regis S, Tappino B, Rosano C, Assereto S, Corsolini F, Di Rocco M, Filocamo M. Molecular analysis and characterization of nine novel CTSK mutations in twelve patients affected by pycnodysostosis. Mutation in brief #961. Online. Hum Mutat. 2007;28:524.CrossRefPubMed
14.
go back to reference Schilling AF, Mülhausen C, Lehmann W, Santer R, Schinke T, Rueger JM, Amling M. High bone mineral density in pycnodysostotic patients with a novel mutation in the propeptide of cathepsin K. Osteoporos Int. 2007;18:659–69.CrossRefPubMed Schilling AF, Mülhausen C, Lehmann W, Santer R, Schinke T, Rueger JM, Amling M. High bone mineral density in pycnodysostotic patients with a novel mutation in the propeptide of cathepsin K. Osteoporos Int. 2007;18:659–69.CrossRefPubMed
15.
go back to reference Li H-Y, Ma H-W, Wang H-Q, Ma W-H. Molecular analysis of a novel cathepsin K gene mutation in a Chinese child with pycnodysostosis. J Int Med Res. 2009;37:264–9.CrossRefPubMed Li H-Y, Ma H-W, Wang H-Q, Ma W-H. Molecular analysis of a novel cathepsin K gene mutation in a Chinese child with pycnodysostosis. J Int Med Res. 2009;37:264–9.CrossRefPubMed
16.
go back to reference Bertola D, Amaral C, Kim C, Albano L, Aguena M, Passos-Bueno MR. Craniosynostosis in pycnodysostosis: broadening the spectrum of the cranial flat bone abnormalities. Am J Med Genet A. 2010;152A:2599–603.CrossRefPubMed Bertola D, Amaral C, Kim C, Albano L, Aguena M, Passos-Bueno MR. Craniosynostosis in pycnodysostosis: broadening the spectrum of the cranial flat bone abnormalities. Am J Med Genet A. 2010;152A:2599–603.CrossRefPubMed
17.
go back to reference Khan B, Ahmed Z, Ahmad W. A novel missense mutation in cathepsin K (CTSK) gene in a consanguineous Pakistani family with pycnodysostosis. J Investig Med. 2010;58:720–4.CrossRefPubMed Khan B, Ahmed Z, Ahmad W. A novel missense mutation in cathepsin K (CTSK) gene in a consanguineous Pakistani family with pycnodysostosis. J Investig Med. 2010;58:720–4.CrossRefPubMed
18.
go back to reference Toral-López J, Gonzalez-Huerta LM, Sosa B, Orozco S, González HP, Cuevas-Covarrubias SA. Familial pycnodysostosis: identification of a novel mutation in the CTSK gene (cathepsin K). J Investig Med. 2011;59:277–80.CrossRefPubMed Toral-López J, Gonzalez-Huerta LM, Sosa B, Orozco S, González HP, Cuevas-Covarrubias SA. Familial pycnodysostosis: identification of a novel mutation in the CTSK gene (cathepsin K). J Investig Med. 2011;59:277–80.CrossRefPubMed
19.
go back to reference Matsushita M, Kitoh H, Kaneko H, Mishima K, Itoh Y, Hattori T, Ishiguro N. Novel compound heterozygous mutations in the cathepsin K gene in Japanese female siblings with pyknodysostosis. Mol Syndromol. 2012;8550:254–8. Matsushita M, Kitoh H, Kaneko H, Mishima K, Itoh Y, Hattori T, Ishiguro N. Novel compound heterozygous mutations in the cathepsin K gene in Japanese female siblings with pyknodysostosis. Mol Syndromol. 2012;8550:254–8.
20.
go back to reference Utokpat P, Panmontha W, Tongkobpetch S, Suphapeetiporn K, Shotelersuk V. Novel CTSK mutation resulting in an entire exon 2 skipping in a Thai girl with pycnodysostosis. Pediatr Int. 2013;55:651–5.CrossRefPubMed Utokpat P, Panmontha W, Tongkobpetch S, Suphapeetiporn K, Shotelersuk V. Novel CTSK mutation resulting in an entire exon 2 skipping in a Thai girl with pycnodysostosis. Pediatr Int. 2013;55:651–5.CrossRefPubMed
21.
go back to reference Zheng H, Zhang Z, He JW, Fu WZ, Zhang ZL. A novel mutation (R122Q) in the cathepsin K gene in a Chinese child with pyknodysostosis. Gene. 2013;521:176–9.CrossRefPubMed Zheng H, Zhang Z, He JW, Fu WZ, Zhang ZL. A novel mutation (R122Q) in the cathepsin K gene in a Chinese child with pyknodysostosis. Gene. 2013;521:176–9.CrossRefPubMed
22.
go back to reference Pangrazio A, Puddu A, Oppo M. Exome sequencing identifies CTSK mutations in patients originally diagnosed as intermediate osteopetrosis. Bone. 2014;59:122–6.CrossRefPubMedPubMedCentral Pangrazio A, Puddu A, Oppo M. Exome sequencing identifies CTSK mutations in patients originally diagnosed as intermediate osteopetrosis. Bone. 2014;59:122–6.CrossRefPubMedPubMedCentral
23.
go back to reference Arman A, Bereket A, Coker A, Kiper PÖS, Güran T, Ozkan B, Atay Z, Akçay T, Haliloglu B, Boduroglu K, Alanay Y, Turan S. Cathepsin K analysis in a pycnodysostosis cohort: demographic, genotypic and phenotypic features. Orphanet J Rare Dis. 2014;9:60.CrossRefPubMedPubMedCentral Arman A, Bereket A, Coker A, Kiper PÖS, Güran T, Ozkan B, Atay Z, Akçay T, Haliloglu B, Boduroglu K, Alanay Y, Turan S. Cathepsin K analysis in a pycnodysostosis cohort: demographic, genotypic and phenotypic features. Orphanet J Rare Dis. 2014;9:60.CrossRefPubMedPubMedCentral
24.
go back to reference Ozdemir T, Atik T, Karaca E, Onay H, Ozkinay F, Cogulu O. A novel mutation in two families with pycnodysostosis. Clin Dirmophol. 2013;22:102–5. Ozdemir T, Atik T, Karaca E, Onay H, Ozkinay F, Cogulu O. A novel mutation in two families with pycnodysostosis. Clin Dirmophol. 2013;22:102–5.
25.
go back to reference Tinsa F, Hamouda S, Bellalah M, Bousnina D, Karboul L, Boussetta K, Bousnina S. Unusual feature of pycnodysostosis: pectus carinatum. La Tunisi Médicale. 2014;92:180–1. Tinsa F, Hamouda S, Bellalah M, Bousnina D, Karboul L, Boussetta K, Bousnina S. Unusual feature of pycnodysostosis: pectus carinatum. La Tunisi Médicale. 2014;92:180–1.
26.
go back to reference Xue Y, Wang L, Xia D, Li Q, Gao S, Dong M, Cai T, Shi S, He L, Hu K, Mao T, Duan X. Dental abnormalities caused by novel compound heterozygous CTSK mutations. J Dent Res. 2015;94:674–81.CrossRefPubMed Xue Y, Wang L, Xia D, Li Q, Gao S, Dong M, Cai T, Shi S, He L, Hu K, Mao T, Duan X. Dental abnormalities caused by novel compound heterozygous CTSK mutations. J Dent Res. 2015;94:674–81.CrossRefPubMed
28.
go back to reference Karakurt L, Yilmaz E, Belhan O, Serin E. Pycnodysostosis associated with bilateral congenital pseudarthrosis of the clavicle. Arch Orthop Trauma Surg. 2003;123:125–7.PubMed Karakurt L, Yilmaz E, Belhan O, Serin E. Pycnodysostosis associated with bilateral congenital pseudarthrosis of the clavicle. Arch Orthop Trauma Surg. 2003;123:125–7.PubMed
29.
30.
go back to reference Gelb B, Edelson J, Desnick R. Linkage of pycnodysostosis to chromosome 1q21 by homozygosity mapping. Nat Genet. 1995;173:1236–8. Gelb B, Edelson J, Desnick R. Linkage of pycnodysostosis to chromosome 1q21 by homozygosity mapping. Nat Genet. 1995;173:1236–8.
31.
go back to reference Johnson M, Polymeropoulos M, Vos H, Ortiz de Luna R, Francomano C. A nonsense mutation in the cathepsin K gene observed in a family with pycnodysostosis. Genome Res. 1996;6:1051–5.CrossRef Johnson M, Polymeropoulos M, Vos H, Ortiz de Luna R, Francomano C. A nonsense mutation in the cathepsin K gene observed in a family with pycnodysostosis. Genome Res. 1996;6:1051–5.CrossRef
32.
go back to reference Freire-Maia N. Genetic effects in Brazilian populations due to consanguineous marriages. Am J Med Genet. 1990;35:115–7.CrossRefPubMed Freire-Maia N. Genetic effects in Brazilian populations due to consanguineous marriages. Am J Med Genet. 1990;35:115–7.CrossRefPubMed
34.
go back to reference Santos S, Kok F, Weller M. Inbreeding levels in Northeast Brazil: strategies for the prospecting of new genetic disorders. Genet Mol Biol. 2010;223:220–3.CrossRef Santos S, Kok F, Weller M. Inbreeding levels in Northeast Brazil: strategies for the prospecting of new genetic disorders. Genet Mol Biol. 2010;223:220–3.CrossRef
35.
go back to reference Jaouad IC, Elalaoui SC, Sbiti A, Elkerh F, Belmahi L, Sefiani A. Consanguineous marriages in Morocco and the consequence for the incidence of autosomal recessive disorders. J Biosoc Sci. 2009;41:575–81.CrossRefPubMed Jaouad IC, Elalaoui SC, Sbiti A, Elkerh F, Belmahi L, Sefiani A. Consanguineous marriages in Morocco and the consequence for the incidence of autosomal recessive disorders. J Biosoc Sci. 2009;41:575–81.CrossRefPubMed
36.
go back to reference Girbal I, Nunes T, Medeira A, Bandeira T. Pycnodysostosis with novel gene mutation and severe obstructive sleep apnoea: management of a complex case. BMJ Case Rep. 2013;2013:bcr2013200590.PubMedPubMedCentral Girbal I, Nunes T, Medeira A, Bandeira T. Pycnodysostosis with novel gene mutation and severe obstructive sleep apnoea: management of a complex case. BMJ Case Rep. 2013;2013:bcr2013200590.PubMedPubMedCentral
37.
go back to reference Novinec M, Lenarčič B. Cathepsin K: a unique collagenolytic cysteine peptidase. Biol Chem. 2013;394:1163–79.CrossRefPubMed Novinec M, Lenarčič B. Cathepsin K: a unique collagenolytic cysteine peptidase. Biol Chem. 2013;394:1163–79.CrossRefPubMed
38.
go back to reference Sahota GS. An economic analysis of internal migration in Brazil. J Polit Econ. 1968;76:218–45.CrossRef Sahota GS. An economic analysis of internal migration in Brazil. J Polit Econ. 1968;76:218–45.CrossRef
40.
go back to reference Moreno CA, Cavalcanti DP: Consanguinidade parental em uma amostra de recém-nascidos do CAISM. In: Anais do XI Congresso Interno de Iniciação Científica da Unicamp. Campinas; 2003. Moreno CA, Cavalcanti DP: Consanguinidade parental em uma amostra de recém-nascidos do CAISM. In: Anais do XI Congresso Interno de Iniciação Científica da Unicamp. Campinas; 2003.
Metadata
Title
Molecular analysis of the CTSK gene in a cohort of 33 Brazilian families with pycnodysostosis from a cluster in a Brazilian Northeast region
Authors
Thaís Fenz Araujo
Erlane Marques Ribeiro
Anderson Pontes Arruda
Carolina Araujo Moreno
Paula Frassinetti Vasconcelos de Medeiros
Renata Moldenhauer Minillo
Débora Gusmão Melo
Chong Ae Kim
Maria Juliana Rodovalho Doriqui
Têmis Maria Felix
Rodrigo Ambrosio Fock
Denise Pontes Cavalcanti
Publication date
01-12-2016
Publisher
BioMed Central
Published in
European Journal of Medical Research / Issue 1/2016
Electronic ISSN: 2047-783X
DOI
https://doi.org/10.1186/s40001-016-0228-7

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