Skip to main content
Top
Published in: Virology Journal 1/2008

Open Access 01-12-2008 | Review

An overview of molecular epidemiology of hepatitis B virus (HBV) in India

Author: Sibnarayan Datta

Published in: Virology Journal | Issue 1/2008

Login to get access

Abstract

Hepatitis B virus (HBV) is one of the major global public health problems. In India, HBsAg prevalence among general population ranges from 2% to 8%, placing India in intermediate HBV endemicity zone and the number of HBV carriers is estimated to be 50 million, forming the second largest global pool of chronic HBV infections. India is a vast country, comprised of multiracial communities with wide variations in ethnicity and cultural patterns, which is attributable to its geographical location, gene influx due to invasion and/or anthropological migrations in the past. Moreover, recent increase in trade, trafficking and use of illicit drugs has also considerably influenced the epidemiology of HBV, specifically in the eastern and north eastern parts of India. However, data on the molecular epidemiology of HBV in India is scanty. HBV genotypes A and D have been well documented from different parts of mainland India. Interestingly, in addition to genotypes A and D, genotype C having high nucleotide similarity with south East Asian subgenotype Cs/C1 strain, have been detected exclusively from eastern Indian HBV carriers, suggesting a recent introduction. Thus, compared to other parts of India, the molecular epidemiology of HBV is naturally distinct in eastern India. Very recently, taking the advantage of circulation of three distinct HBV genotypes within the population of eastern India, different aspects of HBV molecular epidemiology was studied that revealed very interesting results. In this study, the clinical significance of HBV genotypes, core promoter and precore mutations, possible routes of introduction of HBV genotype C in eastern India, the clinical implications of x gene variability, prevalence of the AFB1 induced p53 gene codon 249 mutation, the transmission potentiality of HBV among asymptomatic/inactive or occult HBV carriers and the genetic variability of HBV persisting in the PBL was investigated. In this manuscript, the information available on the molecular epidemiology of HBV in India has been reviewed and the results of studies among the eastern Indian population have been summarised.
Appendix
Available only for authorised users
Literature
2.
go back to reference Lavanchy D: Hepatitis B virus epidemiology, disease burden, treatment, and current and emerging prevention and control measures: a review. J Viral Hepat 2004, 11: 97-107. 10.1046/j.1365-2893.2003.00487.xCrossRefPubMed Lavanchy D: Hepatitis B virus epidemiology, disease burden, treatment, and current and emerging prevention and control measures: a review. J Viral Hepat 2004, 11: 97-107. 10.1046/j.1365-2893.2003.00487.xCrossRefPubMed
3.
go back to reference Ganem D, Schneider RJ: Hepadnaviridae: the viruses and their replication. In Fields Virology. 4th edition. Edited by: Knipe DM, Howley PM. Philadelphia: Lippincott Williams & Wilkins; 2001:2923-2969. Ganem D, Schneider RJ: Hepadnaviridae: the viruses and their replication. In Fields Virology. 4th edition. Edited by: Knipe DM, Howley PM. Philadelphia: Lippincott Williams & Wilkins; 2001:2923-2969.
5.
go back to reference Mizokami M, Orito E, Ohba K, Ikeo K, Lau JY, Gojobori T: Constrained evolution with respect to gene overlap of hepatitis B virus. J Mol Evol 1997, 44: S83-S90. 10.1007/PL00000061CrossRefPubMed Mizokami M, Orito E, Ohba K, Ikeo K, Lau JY, Gojobori T: Constrained evolution with respect to gene overlap of hepatitis B virus. J Mol Evol 1997, 44: S83-S90. 10.1007/PL00000061CrossRefPubMed
6.
go back to reference Kidd-Ljunggren K, Miyakawa Y, Kidd AH: Genetic variability in hepatitis B viruses. J Gen Virol 2002, 83: 1267-1280.CrossRefPubMed Kidd-Ljunggren K, Miyakawa Y, Kidd AH: Genetic variability in hepatitis B viruses. J Gen Virol 2002, 83: 1267-1280.CrossRefPubMed
7.
go back to reference Bonhoeffer S, Sniegowski P: Virus evolution: the importance of being erroneous. Nature 2002, 420: 367-369. 10.1038/420367aCrossRefPubMed Bonhoeffer S, Sniegowski P: Virus evolution: the importance of being erroneous. Nature 2002, 420: 367-369. 10.1038/420367aCrossRefPubMed
8.
go back to reference Okamoto H, Imai M, Kametani M, Nakamura T, Mayumi M: Genomic heterogeneity of hepatitis B virus in a 54-year-old woman who contracted the infection through materno-fetal transmission. Jpn J Exp Med 1987, 57: 231-236.PubMed Okamoto H, Imai M, Kametani M, Nakamura T, Mayumi M: Genomic heterogeneity of hepatitis B virus in a 54-year-old woman who contracted the infection through materno-fetal transmission. Jpn J Exp Med 1987, 57: 231-236.PubMed
9.
go back to reference Orito E, Mizokami M, Ina Y, Moriyama EN, Kameshima N, Yamamoto M, Gojobori T: Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences. Proc Natl Acad Sci USA 1989, 86: 7059-7062. 10.1073/pnas.86.18.7059PubMedCentralCrossRefPubMed Orito E, Mizokami M, Ina Y, Moriyama EN, Kameshima N, Yamamoto M, Gojobori T: Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences. Proc Natl Acad Sci USA 1989, 86: 7059-7062. 10.1073/pnas.86.18.7059PubMedCentralCrossRefPubMed
10.
go back to reference Sterneck M, Gunther S, Gerlach J, Naoumov NV, Santantonio T, Fischer L, Rogiers X, Greten H, Williams R, Will H: Hepatitis B virus sequence changes evolving in liver transplant recipients with fulminant hepatitis. J Hepatol 1997, 26: 754-764. 10.1016/S0168-8278(97)80239-5CrossRefPubMed Sterneck M, Gunther S, Gerlach J, Naoumov NV, Santantonio T, Fischer L, Rogiers X, Greten H, Williams R, Will H: Hepatitis B virus sequence changes evolving in liver transplant recipients with fulminant hepatitis. J Hepatol 1997, 26: 754-764. 10.1016/S0168-8278(97)80239-5CrossRefPubMed
11.
go back to reference Blackberg J, Kidd-Ljunggren K: Occult hepatitis B virus after acute self-limited infection persisting for 30 years without sequence variation. J Hepatol 2000, 33: 992-997. 10.1016/S0168-8278(00)80134-8CrossRefPubMed Blackberg J, Kidd-Ljunggren K: Occult hepatitis B virus after acute self-limited infection persisting for 30 years without sequence variation. J Hepatol 2000, 33: 992-997. 10.1016/S0168-8278(00)80134-8CrossRefPubMed
12.
go back to reference Hannoun C, Horal P, Lindh M: Long-term mutation rates in the hepatitis B virus genome. J Gen Virol 2000, 81: 75-83.CrossRefPubMed Hannoun C, Horal P, Lindh M: Long-term mutation rates in the hepatitis B virus genome. J Gen Virol 2000, 81: 75-83.CrossRefPubMed
14.
go back to reference Schaefer S: Hepatitis B virus: Significance of genotypes. J Viral Hepat 2005, 12: 111-124. 10.1111/j.1365-2893.2005.00584.xCrossRefPubMed Schaefer S: Hepatitis B virus: Significance of genotypes. J Viral Hepat 2005, 12: 111-124. 10.1111/j.1365-2893.2005.00584.xCrossRefPubMed
16.
go back to reference Okamoto H, Tsuda F, Sakugawa H, Sastrosoewignjo RI, Imai M, Miyakawa Y, Mayumi M: Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes. J Gen Virol 1988, 69: 2575-2583. 10.1099/0022-1317-69-10-2575CrossRefPubMed Okamoto H, Tsuda F, Sakugawa H, Sastrosoewignjo RI, Imai M, Miyakawa Y, Mayumi M: Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes. J Gen Virol 1988, 69: 2575-2583. 10.1099/0022-1317-69-10-2575CrossRefPubMed
17.
go back to reference Norder H, Courouce AM, Magnius LO: Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 1994, 198: 489-503. 10.1006/viro.1994.1060CrossRefPubMed Norder H, Courouce AM, Magnius LO: Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 1994, 198: 489-503. 10.1006/viro.1994.1060CrossRefPubMed
18.
go back to reference Stuyver L, De Gendt S, van Geyt C, Zoulim F, Fried M, Schinazi RF, Rossau R: A new genotype of hepatitis B virus: Complete genome and phylogenetic relatedness. J Gen Virol 2000, 81: 67-74.CrossRefPubMed Stuyver L, De Gendt S, van Geyt C, Zoulim F, Fried M, Schinazi RF, Rossau R: A new genotype of hepatitis B virus: Complete genome and phylogenetic relatedness. J Gen Virol 2000, 81: 67-74.CrossRefPubMed
19.
go back to reference Arauz-Ruiz P, Norder H, Robertson BH, Magnius LO: Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America. J Gen Virol 2002, 83: 2059-2073.CrossRefPubMed Arauz-Ruiz P, Norder H, Robertson BH, Magnius LO: Genotype H: A new Amerindian genotype of hepatitis B virus revealed in Central America. J Gen Virol 2002, 83: 2059-2073.CrossRefPubMed
20.
go back to reference Echevarria JM, Avellon A: Hepatitis B virus genetic diversity. J Med Virol 2006, 78: S38-S42. 10.1002/jmv.20605CrossRef Echevarria JM, Avellon A: Hepatitis B virus genetic diversity. J Med Virol 2006, 78: S38-S42. 10.1002/jmv.20605CrossRef
21.
go back to reference Kuang SY, Jackson PE, Wang JB, Lu PX, Munoz A, Qian GS, Kensler TW, Groopman JD: Specific mutations of hepatitis B virus in plasma predict liver cancer development. Proc Natl Acad Sci USA 2004, 101: 3575-3580. 10.1073/pnas.0308232100PubMedCentralCrossRefPubMed Kuang SY, Jackson PE, Wang JB, Lu PX, Munoz A, Qian GS, Kensler TW, Groopman JD: Specific mutations of hepatitis B virus in plasma predict liver cancer development. Proc Natl Acad Sci USA 2004, 101: 3575-3580. 10.1073/pnas.0308232100PubMedCentralCrossRefPubMed
22.
go back to reference Chen WN, Oon CJ, Lim GK: Frequent occurrence of hepatitis B virus surface antigen mutants in subtype adw in vaccinated Singapore infants. Vaccine 2001, 20: 639-640. 10.1016/S0264-410X(01)00421-2CrossRefPubMed Chen WN, Oon CJ, Lim GK: Frequent occurrence of hepatitis B virus surface antigen mutants in subtype adw in vaccinated Singapore infants. Vaccine 2001, 20: 639-640. 10.1016/S0264-410X(01)00421-2CrossRefPubMed
23.
go back to reference Tanaka Y, Mizokami M: Genetic Diversity of Hepatitis B Virus as an important factor associated with differences in clinical outcomes. J Infect Dis 2007, 195: 1-4. 10.1086/509898CrossRefPubMed Tanaka Y, Mizokami M: Genetic Diversity of Hepatitis B Virus as an important factor associated with differences in clinical outcomes. J Infect Dis 2007, 195: 1-4. 10.1086/509898CrossRefPubMed
24.
go back to reference Kato H, Orito E, Sugauchi F, Ueda R, Gish RG, Usuda S, Miyakawa Y, Mizokami M: Determination of hepatitis B virus genotype G by polymerase chain reaction with hemi-nested primers. J Virol Methods 2001, 98: 153-159. 10.1016/S0166-0934(01)00374-3CrossRefPubMed Kato H, Orito E, Sugauchi F, Ueda R, Gish RG, Usuda S, Miyakawa Y, Mizokami M: Determination of hepatitis B virus genotype G by polymerase chain reaction with hemi-nested primers. J Virol Methods 2001, 98: 153-159. 10.1016/S0166-0934(01)00374-3CrossRefPubMed
25.
go back to reference Vieth S, Manegold C, Drosten C, Nippraschk T, Gunther S: Sequence and phylogenetic analysis of hepatitis B virus genotype G isolated in Germany. Virus Genes 2002, 24: 153-156. 10.1023/A:1014572600432CrossRefPubMed Vieth S, Manegold C, Drosten C, Nippraschk T, Gunther S: Sequence and phylogenetic analysis of hepatitis B virus genotype G isolated in Germany. Virus Genes 2002, 24: 153-156. 10.1023/A:1014572600432CrossRefPubMed
26.
go back to reference Hallett RL, Ngui SL, Meigh RE, Mutton KJ, Boxall EH, Teo CG: Widespread dissemination in England of a stable and persistent hepatitis B virus variant. Clin Infect Dis 2004, 39: 945-952. 10.1086/423962CrossRefPubMed Hallett RL, Ngui SL, Meigh RE, Mutton KJ, Boxall EH, Teo CG: Widespread dissemination in England of a stable and persistent hepatitis B virus variant. Clin Infect Dis 2004, 39: 945-952. 10.1086/423962CrossRefPubMed
27.
go back to reference Koppelman MH, Zaaijer HL: Diversity and origin of hepatitis B virus in Dutch blood donors. J Med Virol 2004, 73: 29-32. 10.1002/jmv.20057CrossRefPubMed Koppelman MH, Zaaijer HL: Diversity and origin of hepatitis B virus in Dutch blood donors. J Med Virol 2004, 73: 29-32. 10.1002/jmv.20057CrossRefPubMed
28.
go back to reference Parkin DM, Bray F, Ferlay J, Pisani P: Global cancer statistics, 2002. CA Cancer J Clin 2005, 55: 74-108. 10.3322/canjclin.55.2.74CrossRefPubMed Parkin DM, Bray F, Ferlay J, Pisani P: Global cancer statistics, 2002. CA Cancer J Clin 2005, 55: 74-108. 10.3322/canjclin.55.2.74CrossRefPubMed
29.
go back to reference Hussain SP, Schwank J, Staib F, Wang XW, Harris CC: TP53 mutations and hepatocellular carcinoma: insights into the etiology and pathogenesis of liver cancer. Oncogene 2007, 26: 2166-2176. 10.1038/sj.onc.1210279CrossRefPubMed Hussain SP, Schwank J, Staib F, Wang XW, Harris CC: TP53 mutations and hepatocellular carcinoma: insights into the etiology and pathogenesis of liver cancer. Oncogene 2007, 26: 2166-2176. 10.1038/sj.onc.1210279CrossRefPubMed
30.
go back to reference Montesano P, Hainaut P, Wild CP: Hepatocellular Carcinoma: From Gene to Public Health. J Natl Cancer Inst 1997, 89: 1844-1851. 10.1093/jnci/89.24.1844CrossRefPubMed Montesano P, Hainaut P, Wild CP: Hepatocellular Carcinoma: From Gene to Public Health. J Natl Cancer Inst 1997, 89: 1844-1851. 10.1093/jnci/89.24.1844CrossRefPubMed
31.
go back to reference Stern MC, Umbach DM, Yu MC, London SJ, Zhang ZQ, Taylor JA: Hepatitis B, Aflatoxin B1, and p53 Codon 249 mutation in hepatocellular carcinomas from Guangxi, People's Republic of China, and a meta-analysis of existing studies. Cancer Epidemiol Biomarkers Prev 2001, 10: 617-625.PubMed Stern MC, Umbach DM, Yu MC, London SJ, Zhang ZQ, Taylor JA: Hepatitis B, Aflatoxin B1, and p53 Codon 249 mutation in hepatocellular carcinomas from Guangxi, People's Republic of China, and a meta-analysis of existing studies. Cancer Epidemiol Biomarkers Prev 2001, 10: 617-625.PubMed
32.
go back to reference Wang XW, Forrester K, Yeh H, Feitelson MA, Gu JR, Harris CC: Hepatitis B virus X protein inhibits p53 sequence-specific DNA binding, transcriptional activity, and association with transcription factor ERCC3. Proc Natl Acad Sci USA 1994, 91: 2230-2234. 10.1073/pnas.91.6.2230PubMedCentralCrossRefPubMed Wang XW, Forrester K, Yeh H, Feitelson MA, Gu JR, Harris CC: Hepatitis B virus X protein inhibits p53 sequence-specific DNA binding, transcriptional activity, and association with transcription factor ERCC3. Proc Natl Acad Sci USA 1994, 91: 2230-2234. 10.1073/pnas.91.6.2230PubMedCentralCrossRefPubMed
33.
go back to reference Truant R, Antunovic J, Greenblatt J, Prives C, Cromlish JA: Direct interaction of the hepatitis B virus HBx protein with p53 response element-directed transactivation. J Virol 1995, 69: 1851-1859.PubMedCentralPubMed Truant R, Antunovic J, Greenblatt J, Prives C, Cromlish JA: Direct interaction of the hepatitis B virus HBx protein with p53 response element-directed transactivation. J Virol 1995, 69: 1851-1859.PubMedCentralPubMed
34.
go back to reference Groisman IJ, Fotouhi-Ardakani N, Schecter RL, Woo A, Alaoui-Jamali MA, Batist G: Modulation of Glutathione S-Transferase Alpha by Hepatitis B Virus and the Chemopreventive Drug Oltipraz. J Biol Chem 2000, 275: 33395-33403. 10.1074/jbc.M003754200CrossRef Groisman IJ, Fotouhi-Ardakani N, Schecter RL, Woo A, Alaoui-Jamali MA, Batist G: Modulation of Glutathione S-Transferase Alpha by Hepatitis B Virus and the Chemopreventive Drug Oltipraz. J Biol Chem 2000, 275: 33395-33403. 10.1074/jbc.M003754200CrossRef
35.
go back to reference Madden CR, Finegold MJ, Slagle BL: Altered DNA Mutation Spectrum in Aflatoxin B1-Treated Transgenic Mice That Express the Hepatitis B Virus X Protein. J Virol 2002, 76: 11770-11774. 10.1128/JVI.76.22.11770-11774.2002PubMedCentralCrossRefPubMed Madden CR, Finegold MJ, Slagle BL: Altered DNA Mutation Spectrum in Aflatoxin B1-Treated Transgenic Mice That Express the Hepatitis B Virus X Protein. J Virol 2002, 76: 11770-11774. 10.1128/JVI.76.22.11770-11774.2002PubMedCentralCrossRefPubMed
36.
go back to reference Smela ME, Currier SS, Bailey EA, Essigmann JM: The chemistry and biology of Aflatoxin B1: from mutational spectrometry to carcinogenesis. Carcinogenesis 2001, 22: 535-545. 10.1093/carcin/22.4.535CrossRefPubMed Smela ME, Currier SS, Bailey EA, Essigmann JM: The chemistry and biology of Aflatoxin B1: from mutational spectrometry to carcinogenesis. Carcinogenesis 2001, 22: 535-545. 10.1093/carcin/22.4.535CrossRefPubMed
38.
go back to reference Kidd-Ljunggren K, Oberg M, Kidd AH: The hepatitis B virus X gene: analysis of functional domain variation and gene phylogeny using multiple sequences. J Gen Virol 1995, 76: 2119-2130. 10.1099/0022-1317-76-9-2119CrossRefPubMed Kidd-Ljunggren K, Oberg M, Kidd AH: The hepatitis B virus X gene: analysis of functional domain variation and gene phylogeny using multiple sequences. J Gen Virol 1995, 76: 2119-2130. 10.1099/0022-1317-76-9-2119CrossRefPubMed
40.
go back to reference Gupta S, Singh S: Hepatitis B and C virus co-infections in human immunodeficiency virus positive North Indian patients. World J Gastroenterol 2006, 12: 6879-6883.PubMedCentralPubMed Gupta S, Singh S: Hepatitis B and C virus co-infections in human immunodeficiency virus positive North Indian patients. World J Gastroenterol 2006, 12: 6879-6883.PubMedCentralPubMed
41.
go back to reference Bhattacharya P, Chandra PK, Datta S, Banerjee A, Chakraborty S, Rajendran K, Basu SK, Bhattacharya SK, Chakravarty R: Significant increase in HBV, HCV, HIV and syphilis infections among blood donors in West Bengal, Eastern India 2004–2005: Exploratory screening reveals high frequency of occult HBV infection. World J Gastroenterol 2007, 13: 3730-3733.PubMedCentralCrossRefPubMed Bhattacharya P, Chandra PK, Datta S, Banerjee A, Chakraborty S, Rajendran K, Basu SK, Bhattacharya SK, Chakravarty R: Significant increase in HBV, HCV, HIV and syphilis infections among blood donors in West Bengal, Eastern India 2004–2005: Exploratory screening reveals high frequency of occult HBV infection. World J Gastroenterol 2007, 13: 3730-3733.PubMedCentralCrossRefPubMed
42.
go back to reference Prevention of Hepatitis B in India- An Overview World Health Organization South-East Asia Regional office, New Delhi; 2002. Prevention of Hepatitis B in India- An Overview World Health Organization South-East Asia Regional office, New Delhi; 2002.
43.
go back to reference Murhekar MV, Murhekar KM, Das D, Arankalle VA, Sehgal SC: Prevalence of hepatitis B infection among the primitive tribes of Andaman and Nicobar islands. Indian J Med Res 2000, 111: 199-203.PubMed Murhekar MV, Murhekar KM, Das D, Arankalle VA, Sehgal SC: Prevalence of hepatitis B infection among the primitive tribes of Andaman and Nicobar islands. Indian J Med Res 2000, 111: 199-203.PubMed
44.
go back to reference Murhekar MV, Murhekar KM, Sehgal SC: Age-specific prevalence of hepatitis B infection among the Karen in the Andaman and Nicobar Islands, India. Trop Doct 2004,34(2):117-118.PubMed Murhekar MV, Murhekar KM, Sehgal SC: Age-specific prevalence of hepatitis B infection among the Karen in the Andaman and Nicobar Islands, India. Trop Doct 2004,34(2):117-118.PubMed
45.
go back to reference Murhekar MV, Murhekar KM, Sehgal SC: Alarming prevalence of hepatitis B among the Jarawas- a primitive Negrito tribe of Andaman and Nicobar Islands, India. J Viral Hepatitis 2003, 10: 232-233. 10.1046/j.1365-2893.2003.00419.xCrossRef Murhekar MV, Murhekar KM, Sehgal SC: Alarming prevalence of hepatitis B among the Jarawas- a primitive Negrito tribe of Andaman and Nicobar Islands, India. J Viral Hepatitis 2003, 10: 232-233. 10.1046/j.1365-2893.2003.00419.xCrossRef
46.
go back to reference Sen U, Sankaranarayanan R, Mandal S, Ramanakumar AV, Parkin DM, Siddiqi M: Cancer patterns in eastern India: The first report of the Kolkata Cancer registry. Int J Cancer 2002, 100: 86-91. 10.1002/ijc.10446CrossRefPubMed Sen U, Sankaranarayanan R, Mandal S, Ramanakumar AV, Parkin DM, Siddiqi M: Cancer patterns in eastern India: The first report of the Kolkata Cancer registry. Int J Cancer 2002, 100: 86-91. 10.1002/ijc.10446CrossRefPubMed
47.
go back to reference Basu A, Mukherjee N, Roy S, Sengupta S, Banerjee S, Chakraborty M, Dey B, Roy M, Roy B, Bhattacharyya NP, Roychoudhury S, Majumder PP: Ethnic India: A genomic view, with special reference to peopling and sructure. Genome Res 2003, 13: 2277-2290. 10.1101/gr.1413403PubMedCentralCrossRefPubMed Basu A, Mukherjee N, Roy S, Sengupta S, Banerjee S, Chakraborty M, Dey B, Roy M, Roy B, Bhattacharyya NP, Roychoudhury S, Majumder PP: Ethnic India: A genomic view, with special reference to peopling and sructure. Genome Res 2003, 13: 2277-2290. 10.1101/gr.1413403PubMedCentralCrossRefPubMed
48.
go back to reference Sahoo S, Singh A, Himabindu G, Banejee J, Sitalaximi T, Gaikwad S, Trivedi R, Endicott P, Kivisild T, Metspalu M, Villems R, Kashyap VK: A prehistory of Indian Y Chromosome: Evaluating demic diffusion scenarions. Proc Natl Acad Sci USA 2006, 103: 843-848. 10.1073/pnas.0507714103PubMedCentralCrossRefPubMed Sahoo S, Singh A, Himabindu G, Banejee J, Sitalaximi T, Gaikwad S, Trivedi R, Endicott P, Kivisild T, Metspalu M, Villems R, Kashyap VK: A prehistory of Indian Y Chromosome: Evaluating demic diffusion scenarions. Proc Natl Acad Sci USA 2006, 103: 843-848. 10.1073/pnas.0507714103PubMedCentralCrossRefPubMed
49.
go back to reference Thakur V, Guptan RC, Kazim SN, Malhotra V, Sarin SK: Profile, spectrum and significance of HBV genotypes in chronic liver disease patients in the Indian subcontinent. J Gastroenterol Hepatol 2002, 2: 165-170. 10.1046/j.1440-1746.2002.02605.xCrossRef Thakur V, Guptan RC, Kazim SN, Malhotra V, Sarin SK: Profile, spectrum and significance of HBV genotypes in chronic liver disease patients in the Indian subcontinent. J Gastroenterol Hepatol 2002, 2: 165-170. 10.1046/j.1440-1746.2002.02605.xCrossRef
50.
go back to reference Bamshad M, Kivisild T, Watkins WS, Dixon ME, Ricker CE, Rao BB, Naidu M, Prasad BVR, Reddy PG, Rasanayagam A, Papiha SS, Villems R, Redd AJ, Hammer MF, Nguyen SV, Carroll ML, Batzer MA, Jorde LB: Genetic evidence on the origins of Indian caste populations. Genome Res 2001, 11: 994-1004. 10.1101/gr.GR-1733RRPubMedCentralCrossRefPubMed Bamshad M, Kivisild T, Watkins WS, Dixon ME, Ricker CE, Rao BB, Naidu M, Prasad BVR, Reddy PG, Rasanayagam A, Papiha SS, Villems R, Redd AJ, Hammer MF, Nguyen SV, Carroll ML, Batzer MA, Jorde LB: Genetic evidence on the origins of Indian caste populations. Genome Res 2001, 11: 994-1004. 10.1101/gr.GR-1733RRPubMedCentralCrossRefPubMed
51.
go back to reference Beyrer C, Razak MH, Lisam K, Chen J, Lui W, Yu XF: Overland heroin trafficking routes and HIV-1 spread in south and south-east Asia. AIDS 2000, 14: 75-83. 10.1097/00002030-200001070-00009CrossRefPubMed Beyrer C, Razak MH, Lisam K, Chen J, Lui W, Yu XF: Overland heroin trafficking routes and HIV-1 spread in south and south-east Asia. AIDS 2000, 14: 75-83. 10.1097/00002030-200001070-00009CrossRefPubMed
52.
go back to reference Vivekanandan P, Abraham P, Sridharan G, Chandy G, Raghuraman S, Daniel H, Subramaniam T: Distribution of Hepatitis B Virus Genotypes in Blood Donors and Chronically Infected Patients in a Tertiary Care Hospital in Southern India. Clin Infect Dis 2004, 38: e81-86. 10.1086/383144CrossRefPubMed Vivekanandan P, Abraham P, Sridharan G, Chandy G, Raghuraman S, Daniel H, Subramaniam T: Distribution of Hepatitis B Virus Genotypes in Blood Donors and Chronically Infected Patients in a Tertiary Care Hospital in Southern India. Clin Infect Dis 2004, 38: e81-86. 10.1086/383144CrossRefPubMed
53.
go back to reference Chaudhuri S, Das S, Chowdhury A, Santra A, Bhattacharya SK, Naik TN: Molecular epidemiology of HCV infection among acute and chronic liver disease patients in Kolkata, India. J Clin Virol 2005, 32: 38-46. 10.1016/j.jcv.2004.07.003CrossRefPubMed Chaudhuri S, Das S, Chowdhury A, Santra A, Bhattacharya SK, Naik TN: Molecular epidemiology of HCV infection among acute and chronic liver disease patients in Kolkata, India. J Clin Virol 2005, 32: 38-46. 10.1016/j.jcv.2004.07.003CrossRefPubMed
54.
go back to reference Nayak NC, Panda SK, Bhan MK, Guha DK, Zuckerman AJ: Dynamics and impact of perinatal transmission of hepatitis B virus in North India. J Med Virol 1987, 21: 137-145. 10.1002/jmv.1890210205CrossRefPubMed Nayak NC, Panda SK, Bhan MK, Guha DK, Zuckerman AJ: Dynamics and impact of perinatal transmission of hepatitis B virus in North India. J Med Virol 1987, 21: 137-145. 10.1002/jmv.1890210205CrossRefPubMed
55.
go back to reference Chakravarty R, Chowdhury A, Chaudhuri S, Santra A, Neogi M, Raendran K, Panda CK, Chakravarty M: Hepatitis B infection in Eastern Indian families: Need for screening of adult siblings and mothers of adult index cases. Public Health 2005, 119: 647-654. 10.1016/j.puhe.2004.09.007CrossRefPubMed Chakravarty R, Chowdhury A, Chaudhuri S, Santra A, Neogi M, Raendran K, Panda CK, Chakravarty M: Hepatitis B infection in Eastern Indian families: Need for screening of adult siblings and mothers of adult index cases. Public Health 2005, 119: 647-654. 10.1016/j.puhe.2004.09.007CrossRefPubMed
56.
go back to reference Banerjee A, Chakravarty R, Mondal PN, Chakraborty MS: Hepatitis B virus genotype D infection among antenatal patients attending a maternity hospital in Calcutta, India: assessment of infectivity status. Southeast Asian J Trop Med Public Health 2005, 36: 203-206.PubMed Banerjee A, Chakravarty R, Mondal PN, Chakraborty MS: Hepatitis B virus genotype D infection among antenatal patients attending a maternity hospital in Calcutta, India: assessment of infectivity status. Southeast Asian J Trop Med Public Health 2005, 36: 203-206.PubMed
57.
go back to reference Chowdhury A, Santra A, Chakravorty R, Banerji A, Pal S, Dhali GK, Datta S, Banerji S, Manna B, Chowdhury SR, Bhattacharya SK, Mazumder DG: Community-based epidemiology of hepatitis B virus infection in West Bengal, India: prevalence of hepatitis B e antigen-negative infection and associated viral variants. J Gastroenterol Hepatol 2005, 20: 1712-1720. 10.1111/j.1440-1746.2005.04070.xCrossRefPubMed Chowdhury A, Santra A, Chakravorty R, Banerji A, Pal S, Dhali GK, Datta S, Banerji S, Manna B, Chowdhury SR, Bhattacharya SK, Mazumder DG: Community-based epidemiology of hepatitis B virus infection in West Bengal, India: prevalence of hepatitis B e antigen-negative infection and associated viral variants. J Gastroenterol Hepatol 2005, 20: 1712-1720. 10.1111/j.1440-1746.2005.04070.xCrossRefPubMed
58.
go back to reference Petersen NJ, Barrett DH, Bond WW, Berquist KR, Favero MS, Bender TR, Maynard JE: Hepatitis B surface antigen in saliva, impetiginous lesions, and the environment in two remote Alaskan villages. Appl Environ Microbiol 1976, 32: 572-574.PubMedCentralPubMed Petersen NJ, Barrett DH, Bond WW, Berquist KR, Favero MS, Bender TR, Maynard JE: Hepatitis B surface antigen in saliva, impetiginous lesions, and the environment in two remote Alaskan villages. Appl Environ Microbiol 1976, 32: 572-574.PubMedCentralPubMed
59.
go back to reference Maddrey WC: Hepatitis B: an important public health issue. J Med Virol 2000, 61: 362-366. 10.1002/1096-9071(200007)61:3<362::AID-JMV14>3.0.CO;2-ICrossRefPubMed Maddrey WC: Hepatitis B: an important public health issue. J Med Virol 2000, 61: 362-366. 10.1002/1096-9071(200007)61:3<362::AID-JMV14>3.0.CO;2-ICrossRefPubMed
60.
go back to reference Thakur V, Kazim SN, Guptan RC, Malhotra V, Sarin SK: Molecular epidemiology and transmission of hepatitis B virus in close family contacts of HBV-related chronic liver disease patients. J Med Virol 2003, 70: 520-528. 10.1002/jmv.10426CrossRefPubMed Thakur V, Kazim SN, Guptan RC, Malhotra V, Sarin SK: Molecular epidemiology and transmission of hepatitis B virus in close family contacts of HBV-related chronic liver disease patients. J Med Virol 2003, 70: 520-528. 10.1002/jmv.10426CrossRefPubMed
61.
go back to reference Gandhe SS, Chadha MS, Arankalle VA: Hepatitis B virus genotypes and serotypes in Western India: Lack of clinical significance. J Med Virol 2003, 63: 324-330. 10.1002/jmv.10292CrossRef Gandhe SS, Chadha MS, Arankalle VA: Hepatitis B virus genotypes and serotypes in Western India: Lack of clinical significance. J Med Virol 2003, 63: 324-330. 10.1002/jmv.10292CrossRef
62.
go back to reference Kumar A, Kumar SI, Pandey R, Naik S, Aggarwal R: Hepatitis B virus genotype A is more often associated with severe liver disease in northern India than is genotype D. Indian J Gastroenterol 2005, 24: 19-22.PubMed Kumar A, Kumar SI, Pandey R, Naik S, Aggarwal R: Hepatitis B virus genotype A is more often associated with severe liver disease in northern India than is genotype D. Indian J Gastroenterol 2005, 24: 19-22.PubMed
63.
go back to reference Banerjee A, Datta S, Chandra PK, Roychowdhury S, Panda CK, Chakravarty R: Distribution of hepatitis B virus genotypes: Phylogenetic analysis and virological characteristics of Genotype C circulating among HBV carriers in Kolkata, Eastern India. World J Gastroenterol 2006, 12: 5964-5971.PubMedCentralPubMed Banerjee A, Datta S, Chandra PK, Roychowdhury S, Panda CK, Chakravarty R: Distribution of hepatitis B virus genotypes: Phylogenetic analysis and virological characteristics of Genotype C circulating among HBV carriers in Kolkata, Eastern India. World J Gastroenterol 2006, 12: 5964-5971.PubMedCentralPubMed
64.
go back to reference Banerjee A, Kurbanov F, Datta S, Chandra PK, Tanaka Y, Mizokami M, Chakravarty R: Phylogenetic relatedness and genetic diversity of hepatitis B virus isolates in Eastern India. J Med Virol 2006, 78: 1164-1174. 10.1002/jmv.20677CrossRefPubMed Banerjee A, Kurbanov F, Datta S, Chandra PK, Tanaka Y, Mizokami M, Chakravarty R: Phylogenetic relatedness and genetic diversity of hepatitis B virus isolates in Eastern India. J Med Virol 2006, 78: 1164-1174. 10.1002/jmv.20677CrossRefPubMed
65.
go back to reference Chattopadhyay S, Das BC, Hussain Z, Kar P: Hepatitis B virus genotypes in acute and fulminant hepatitis patients from north India using two different molecular genotyping approaches. Hepatol Res 2006, 35: 79-82. 10.1016/j.hepres.2006.03.002CrossRefPubMed Chattopadhyay S, Das BC, Hussain Z, Kar P: Hepatitis B virus genotypes in acute and fulminant hepatitis patients from north India using two different molecular genotyping approaches. Hepatol Res 2006, 35: 79-82. 10.1016/j.hepres.2006.03.002CrossRefPubMed
66.
go back to reference Chattopadhyay S, Das BC, Kar P: Hepatitis B virus genotypes in chronic liver disease patients from New Delhi, India. World J Gastroenterol 2006, 12: 6702-6706.PubMedCentralPubMed Chattopadhyay S, Das BC, Kar P: Hepatitis B virus genotypes in chronic liver disease patients from New Delhi, India. World J Gastroenterol 2006, 12: 6702-6706.PubMedCentralPubMed
67.
go back to reference Tanaka Y, Hasegawa I, Kato T, Orito E, Hirashima N, Acharya SK, Gish RG, Kramvis A, Kew MC, Yoshihara N, Shrestha SM, Khan M, Miyakawa Y, Mizokami M: A case control study for differences among hepatitis B virus infections of genotypes A (subtypes Aa and Ae) and D. Hepatology 2004, 40: 747-755. 10.1002/hep.20365CrossRefPubMed Tanaka Y, Hasegawa I, Kato T, Orito E, Hirashima N, Acharya SK, Gish RG, Kramvis A, Kew MC, Yoshihara N, Shrestha SM, Khan M, Miyakawa Y, Mizokami M: A case control study for differences among hepatitis B virus infections of genotypes A (subtypes Aa and Ae) and D. Hepatology 2004, 40: 747-755. 10.1002/hep.20365CrossRefPubMed
68.
go back to reference Arankalle VA, Murhekar KM, Gandhe SS, Ramdasi AY, Padbidri , Sehgal SC: Hepatitis B virus: predominance of genotype D in primitive tribes of the Andaman and Nicobar Islands, India (1989–1999). J Gen Virol 2003, 84: 1915-1920. 10.1099/vir.0.18943-0CrossRefPubMed Arankalle VA, Murhekar KM, Gandhe SS, Ramdasi AY, Padbidri , Sehgal SC: Hepatitis B virus: predominance of genotype D in primitive tribes of the Andaman and Nicobar Islands, India (1989–1999). J Gen Virol 2003, 84: 1915-1920. 10.1099/vir.0.18943-0CrossRefPubMed
69.
go back to reference Murhekar MV, Chakraborty R, Murhekar KM, Banerjee A, Sehgal SC: Hepatitis B virus genotypes among the Jarawas: A primitive Negrito tribe of Andaman and Nicobar Islands, India. Arch Virol 2006, 151: 1499-1510. 10.1007/s00705-006-0737-8CrossRefPubMed Murhekar MV, Chakraborty R, Murhekar KM, Banerjee A, Sehgal SC: Hepatitis B virus genotypes among the Jarawas: A primitive Negrito tribe of Andaman and Nicobar Islands, India. Arch Virol 2006, 151: 1499-1510. 10.1007/s00705-006-0737-8CrossRefPubMed
70.
go back to reference Kramvis A, Kew M: Relationship of genotypes of hepatitis B virus to mutations, disease progression and response to antiviral therapy. J Viral Hepat 2005, 12: 456-464. 10.1111/j.1365-2893.2005.00624.xCrossRefPubMed Kramvis A, Kew M: Relationship of genotypes of hepatitis B virus to mutations, disease progression and response to antiviral therapy. J Viral Hepat 2005, 12: 456-464. 10.1111/j.1365-2893.2005.00624.xCrossRefPubMed
71.
go back to reference Gandhe SS, Chadha MS, Walimbe AM, Arankalle VA: Hepatitis B virus: prevalence of precore/core promoter mutants in different clinical categories of Indian patients. J Viral Hepat 2003, 10: 367-382. 10.1046/j.1365-2893.2003.00445.xCrossRefPubMed Gandhe SS, Chadha MS, Walimbe AM, Arankalle VA: Hepatitis B virus: prevalence of precore/core promoter mutants in different clinical categories of Indian patients. J Viral Hepat 2003, 10: 367-382. 10.1046/j.1365-2893.2003.00445.xCrossRefPubMed
72.
go back to reference Chauhan R, Kazim SN, Bhattacharjee J, Sakhuja P, Sarin SK: Basal Core Promoter, Precore Region Mutations of HBV and Their Association With e Antigen, Genotype, and Severity of Liver Disease in Patients With Chronic Hepatitis B in India. J Med Virol 2006, 78: 1047-1054. 10.1002/jmv.20661CrossRefPubMed Chauhan R, Kazim SN, Bhattacharjee J, Sakhuja P, Sarin SK: Basal Core Promoter, Precore Region Mutations of HBV and Their Association With e Antigen, Genotype, and Severity of Liver Disease in Patients With Chronic Hepatitis B in India. J Med Virol 2006, 78: 1047-1054. 10.1002/jmv.20661CrossRefPubMed
73.
go back to reference Banerjee A, Banerjee S, Chowdhury A, Santra A, Chowdhury S, Roychowdhury S, Panda CK, Bhattacharya SK, Chakravarty R: Nucleic acid sequence analysis of BCP/precore/core region of hepatitis B virus isolated from chronic carriers of the virus from Kolkata, Eastern India: low frequency of mutation in the precore region. Intervirology 2005, 48: 389-399. 10.1159/000086066CrossRefPubMed Banerjee A, Banerjee S, Chowdhury A, Santra A, Chowdhury S, Roychowdhury S, Panda CK, Bhattacharya SK, Chakravarty R: Nucleic acid sequence analysis of BCP/precore/core region of hepatitis B virus isolated from chronic carriers of the virus from Kolkata, Eastern India: low frequency of mutation in the precore region. Intervirology 2005, 48: 389-399. 10.1159/000086066CrossRefPubMed
74.
go back to reference Raza SA, Clifford GM, Franceschi S: Worldwide variation in the relative importance of hepatitis B and hepatitis C viruses in hepatocellular carcinoma: a systematic review. Brit J Cancer 2007, 96: 1127-1134. 10.1038/sj.bjc.6603649PubMedCentralCrossRefPubMed Raza SA, Clifford GM, Franceschi S: Worldwide variation in the relative importance of hepatitis B and hepatitis C viruses in hepatocellular carcinoma: a systematic review. Brit J Cancer 2007, 96: 1127-1134. 10.1038/sj.bjc.6603649PubMedCentralCrossRefPubMed
75.
go back to reference Nandakumar A, Gupta PC, Gangadharan P, Visweswara RN, Parkin DM: Geography pathology revisited: Development of an atlas of cancer in India. Int J Cancer 2005, 116: 740-754. 10.1002/ijc.21109CrossRefPubMed Nandakumar A, Gupta PC, Gangadharan P, Visweswara RN, Parkin DM: Geography pathology revisited: Development of an atlas of cancer in India. Int J Cancer 2005, 116: 740-754. 10.1002/ijc.21109CrossRefPubMed
76.
go back to reference Katiyar S, Dash BC, Thakur V, Guptan RC, Sarin SK, Das BC: P53 tumor suppressor gene mutations in hepatocellular carcinoma patients in India. Cancer 2000, 88: 1565-1573. 10.1002/(SICI)1097-0142(20000401)88:7<1565::AID-CNCR10>3.0.CO;2-9CrossRefPubMed Katiyar S, Dash BC, Thakur V, Guptan RC, Sarin SK, Das BC: P53 tumor suppressor gene mutations in hepatocellular carcinoma patients in India. Cancer 2000, 88: 1565-1573. 10.1002/(SICI)1097-0142(20000401)88:7<1565::AID-CNCR10>3.0.CO;2-9CrossRefPubMed
77.
go back to reference Chakravarty R, Neogi M, Roychowdhury S, Panda CK: Presence of hepatitis B surface antigen mutant G145R DNA in the peripheral blood leukocytes of the family members of an asymptomatic carrier and evidence of its horizontal transmission. Virus Res 2002, 90: 133-141. 10.1016/S0168-1702(02)00147-8CrossRefPubMed Chakravarty R, Neogi M, Roychowdhury S, Panda CK: Presence of hepatitis B surface antigen mutant G145R DNA in the peripheral blood leukocytes of the family members of an asymptomatic carrier and evidence of its horizontal transmission. Virus Res 2002, 90: 133-141. 10.1016/S0168-1702(02)00147-8CrossRefPubMed
78.
go back to reference Datta S, Banerjee A, Chandra PK, Chowdhury A, Chakravarty R: Genotype, phylogenetic analysis, and transmission pattern of occult hepatitis B virus (HBV) infection in families of asymptomatic HBsAg carriers. J Med Virol 2006, 78: 53-59. 10.1002/jmv.20503CrossRefPubMed Datta S, Banerjee A, Chandra PK, Chowdhury A, Chakravarty R: Genotype, phylogenetic analysis, and transmission pattern of occult hepatitis B virus (HBV) infection in families of asymptomatic HBsAg carriers. J Med Virol 2006, 78: 53-59. 10.1002/jmv.20503CrossRefPubMed
79.
go back to reference Datta S, Biswas A, Chandra PK, Banerjee A, Panigrahi R, Mahapatra PK, Chakrabarti S, Panda CK, Chakravarty R: Molecular epidemiology and clinical significance of hepatitis B virus genotypes, core promoter and precore mutations in Eastern India. Intervirology 2008, 51: 275-284. 10.1159/000170902CrossRefPubMed Datta S, Biswas A, Chandra PK, Banerjee A, Panigrahi R, Mahapatra PK, Chakrabarti S, Panda CK, Chakravarty R: Molecular epidemiology and clinical significance of hepatitis B virus genotypes, core promoter and precore mutations in Eastern India. Intervirology 2008, 51: 275-284. 10.1159/000170902CrossRefPubMed
80.
go back to reference Datta S, Banerjee A, Chandra PK, Biswas A, Panigrahi R, Mahapatra PK, Panda CK, Chakrabarti S, Bhattacharya SK, Chakravarty R: Analysis of hepatitis B virus X gene phylogeny, genetic variability and its impact on pathogenesis: implications in Eastern Indian HBV carriers. Virology 2008,382(2):190-198. 10.1016/j.virol.2008.09.007CrossRefPubMed Datta S, Banerjee A, Chandra PK, Biswas A, Panigrahi R, Mahapatra PK, Panda CK, Chakrabarti S, Bhattacharya SK, Chakravarty R: Analysis of hepatitis B virus X gene phylogeny, genetic variability and its impact on pathogenesis: implications in Eastern Indian HBV carriers. Virology 2008,382(2):190-198. 10.1016/j.virol.2008.09.007CrossRefPubMed
81.
go back to reference Datta S, Banerjee A, Chandra PK, Mahapatra PK, Chakrabarti S, Chakravarty R: Drug trafficking routes and hepatitis B in injection drug users, Manipur, India. Emerg Infect Dis 2006, 12: 1954-1957.PubMedCentralCrossRefPubMed Datta S, Banerjee A, Chandra PK, Mahapatra PK, Chakrabarti S, Chakravarty R: Drug trafficking routes and hepatitis B in injection drug users, Manipur, India. Emerg Infect Dis 2006, 12: 1954-1957.PubMedCentralCrossRefPubMed
82.
go back to reference Datta S, Chandra PK, Banerjee A, Chakravarty R, Murhekar KM, Murhekar MV: Predominance of Hepatitis B virus genotype C among Karens, the 'old settlers' of Andaman and Nicobar Islands, India. Arch Virol 2007, 152: 1223-1228. 10.1007/s00705-006-0910-0CrossRefPubMed Datta S, Chandra PK, Banerjee A, Chakravarty R, Murhekar KM, Murhekar MV: Predominance of Hepatitis B virus genotype C among Karens, the 'old settlers' of Andaman and Nicobar Islands, India. Arch Virol 2007, 152: 1223-1228. 10.1007/s00705-006-0910-0CrossRefPubMed
83.
go back to reference Datta S, Banerjee A, Chandra PK, Chakravarty R: Pin1-HBx Interaction: A step towards understanding the significance of HBV genotypes in hepatocarcinogenesis. Gastroenterology 2007, 133: 727-728. 10.1053/j.gastro.2007.06.033CrossRefPubMed Datta S, Banerjee A, Chandra PK, Chakravarty R: Pin1-HBx Interaction: A step towards understanding the significance of HBV genotypes in hepatocarcinogenesis. Gastroenterology 2007, 133: 727-728. 10.1053/j.gastro.2007.06.033CrossRefPubMed
Metadata
Title
An overview of molecular epidemiology of hepatitis B virus (HBV) in India
Author
Sibnarayan Datta
Publication date
01-12-2008
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2008
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-5-156

Other articles of this Issue 1/2008

Virology Journal 1/2008 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine